RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
CDH23-211ENST00000475158 HRNRQ86YZ3 2850 aaPredicted RBP6.37□□□□□ -1.39
CDH23-211ENST00000475158 PRR34Q9NV39 138 aa6.36□□□□□ -1.39
CDH23-211ENST00000475158 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
CDH23-211ENST00000475158 C15orf56Q8N910 161 aa6.36□□□□□ -1.39
CDH23-211ENST00000475158 SPINK1P00995 79 aa6.36□□□□□ -1.39
CDH23-211ENST00000475158 Q8NBF4 154 aa6.35□□□□□ -1.39
CDH23-211ENST00000475158 FAM104AQ969W3 186 aa6.35□□□□□ -1.39
CDH23-211ENST00000475158 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
CDH23-211ENST00000475158 NBDYA0A0U1RRE5 68 aa6.35□□□□□ -1.39
CDH23-211ENST00000475158 ERC2-IT1O76042 136 aa6.35□□□□□ -1.39
CDH23-211ENST00000475158 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
CDH23-211ENST00000475158 H3BS24 57 aa6.34□□□□□ -1.4
CDH23-211ENST00000475158 LINC00612Q8N6U2 182 aa6.33□□□□□ -1.4
CDH23-211ENST00000475158 SPACA4Q8TDM5 124 aa6.33□□□□□ -1.4
CDH23-211ENST00000475158 CELSR1Q9NYQ6 3014 aa6.33□□□□□ -1.4
CDH23-211ENST00000475158 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
CDH23-211ENST00000475158 C16orf90A8MZG2 172 aa6.32□□□□□ -1.4
CDH23-211ENST00000475158 TRBV7-4A0A0J9YYF1 115 aa6.31□□□□□ -1.4
CDH23-211ENST00000475158 C7orf65Q6ZTY9 151 aa6.31□□□□□ -1.4
CDH23-211ENST00000475158 ZFHX3Q15911 3703 aa6.31□□□□□ -1.4
CDH23-211ENST00000475158 RTL8CO15255 209 aa6.31□□□□□ -1.4
CDH23-211ENST00000475158 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
CDH23-211ENST00000475158 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
CDH23-211ENST00000475158 LCA10Q71F78 164 aa6.31□□□□□ -1.4
CDH23-211ENST00000475158 K7EQZ3 153 aa6.3□□□□□ -1.4
CDH23-211ENST00000475158 ANAPC11Q9NYG5 84 aa6.3□□□□□ -1.4
CDH23-211ENST00000475158 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
CDH23-211ENST00000475158 MXRA5Q9NR99 2828 aa6.29□□□□□ -1.4
CDH23-211ENST00000475158 CYP4F30PQ9H0H9 118 aa6.29□□□□□ -1.4
CDH23-211ENST00000475158 Q8N377 158 aa6.29□□□□□ -1.4
CDH23-211ENST00000475158 IGLV1-50A0A075B6I6 118 aa6.28□□□□□ -1.4
CDH23-211ENST00000475158 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
CDH23-211ENST00000475158 OBSCN-AS1Q96MR7 158 aa6.28□□□□□ -1.4
CDH23-211ENST00000475158 KCNQ1DNQ9H478 68 aa6.27□□□□□ -1.4
CDH23-211ENST00000475158 COA5Q86WW8 74 aa6.27□□□□□ -1.41
CDH23-211ENST00000475158 K7ERS5 55 aa6.27□□□□□ -1.41
CDH23-211ENST00000475158 Q1T7F1 81 aa6.25□□□□□ -1.41
CDH23-211ENST00000475158 IGLV8-61A0A075B6I0 122 aa6.24□□□□□ -1.41
CDH23-211ENST00000475158 A0A1B0GU69 56 aa6.24□□□□□ -1.41
CDH23-211ENST00000475158 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
CDH23-211ENST00000475158 OCR1Q9BZK8 76 aa6.23□□□□□ -1.41
CDH23-211ENST00000475158 Q8NDZ9 215 aa6.23□□□□□ -1.41
CDH23-211ENST00000475158 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
CDH23-211ENST00000475158 A0A1W2PNM2 257 aa6.2□□□□□ -1.42
CDH23-211ENST00000475158 C9orf163Q8N9P6 203 aa6.19□□□□□ -1.42
CDH23-211ENST00000475158 CSMD2Q7Z408 3487 aa6.18□□□□□ -1.42
CDH23-211ENST00000475158 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
CDH23-211ENST00000475158 TENM3Q9P273 2699 aa6.18□□□□□ -1.42
CDH23-211ENST00000475158 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
CDH23-211ENST00000475158 H3BPC8 53 aa6.17□□□□□ -1.42
CDH23-211ENST00000475158 A0A087WTM6 91 aa6.17□□□□□ -1.42
CDH23-211ENST00000475158 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
CDH23-211ENST00000475158 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
CDH23-211ENST00000475158 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.43
CDH23-211ENST00000475158 A0A1B0GW54 56 aa6.14□□□□□ -1.43
CDH23-211ENST00000475158 A8MWP4 228 aa6.14□□□□□ -1.43
CDH23-211ENST00000475158 Q5VV11 94 aa6.14□□□□□ -1.43
CDH23-211ENST00000475158 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
CDH23-211ENST00000475158 WWC2-AS2Q96NR7 200 aa6.14□□□□□ -1.43
CDH23-211ENST00000475158 PSORS1C2Q9UIG4 136 aa6.14□□□□□ -1.43
CDH23-211ENST00000475158 ACYP2P14621 99 aa6.14□□□□□ -1.43
CDH23-211ENST00000475158 LINC00313P59037 77 aa6.14□□□□□ -1.43
CDH23-211ENST00000475158 Q8N9P0 234 aaPredicted RBP6.14□□□□□ -1.43
CDH23-211ENST00000475158 APLNQ9ULZ1 77 aa6.13□□□□□ -1.43
CDH23-211ENST00000475158 TLX1NBP0CAT3 122 aa6.12□□□□□ -1.43
CDH23-211ENST00000475158 TP53AIP1Q9HCN2 124 aa6.12□□□□□ -1.43
CDH23-211ENST00000475158 FBN1P35555 2871 aaKnown RBP6.12□□□□□ -1.43
CDH23-211ENST00000475158 ZNF861PO60384 105 aa6.11□□□□□ -1.43
CDH23-211ENST00000475158 DSCR10P59022 87 aa6.11□□□□□ -1.43
CDH23-211ENST00000475158 Q96NJ1 140 aa6.11□□□□□ -1.43
CDH23-211ENST00000475158 VPS13CQ709C8 3753 aa6.11□□□□□ -1.43
CDH23-211ENST00000475158 PRR26Q8N8Z3 221 aa6.1□□□□□ -1.43
CDH23-211ENST00000475158 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.43
CDH23-211ENST00000475158 UQCR11O14957 56 aa6.09□□□□□ -1.43
CDH23-211ENST00000475158 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.44
CDH23-211ENST00000475158 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.44
CDH23-211ENST00000475158 A8MU10 97 aa6.08□□□□□ -1.44
CDH23-211ENST00000475158 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
CDH23-211ENST00000475158 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
CDH23-211ENST00000475158 TNP2Q05952 138 aa6.07□□□□□ -1.44
CDH23-211ENST00000475158 IGLV5-48A0A075B6I7 105 aa6.07□□□□□ -1.44
CDH23-211ENST00000475158 SSBP3-AS1Q7Z2R9 100 aa6.07□□□□□ -1.44
CDH23-211ENST00000475158 CNBPP62633 177 aaKnown RBP6.06□□□□□ -1.44
CDH23-211ENST00000475158 KRTAP1-5Q9BYS1 174 aa6.06□□□□□ -1.44
CDH23-211ENST00000475158 PLA2G2DQ9UNK4 145 aa6.06□□□□□ -1.44
CDH23-211ENST00000475158 TENM1Q9UKZ4 2725 aa6.06□□□□□ -1.44
CDH23-211ENST00000475158 Q75L30 129 aa6.06□□□□□ -1.44
CDH23-211ENST00000475158 SPANXA2-OT1Q8N9U9 137 aa6.06□□□□□ -1.44
CDH23-211ENST00000475158 C9orf92A6NGG3 77 aa6.05□□□□□ -1.44
CDH23-211ENST00000475158 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
CDH23-211ENST00000475158 A0A1B0GVX0 72 aa6.03□□□□□ -1.44
CDH23-211ENST00000475158 VWFP04275 2813 aa6.03□□□□□ -1.44
CDH23-211ENST00000475158 IGLV7-43P04211 117 aa6.03□□□□□ -1.44
CDH23-211ENST00000475158 SPINK7P58062 85 aa6.03□□□□□ -1.44
CDH23-211ENST00000475158 BSNQ9UPA5 3926 aa6.03□□□□□ -1.44
CDH23-211ENST00000475158 PDZD2O15018 2839 aa6.02□□□□□ -1.45
CDH23-211ENST00000475158 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
CDH23-211ENST00000475158 IGLV5-37A0A075B6J1 123 aa5.98□□□□□ -1.45
CDH23-211ENST00000475158 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms