RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-252ENST00000474381 MUC2Q02817 5179 aa11.27□□□□□ -0.6
HLA-B-252ENST00000474381 Q5XG85 94 aa11.27□□□□□ -0.61
HLA-B-252ENST00000474381 TMA7Q9Y2S6 64 aaKnown RBP11.27□□□□□ -0.61
HLA-B-252ENST00000474381 F8WEM9 126 aa11.26□□□□□ -0.61
HLA-B-252ENST00000474381 PPDPFLQ8WWR9 84 aa11.26□□□□□ -0.61
HLA-B-252ENST00000474381 H0YGX0 51 aa11.23□□□□□ -0.61
HLA-B-252ENST00000474381 MUC17Q685J3 4493 aa11.23□□□□□ -0.61
HLA-B-252ENST00000474381 SNCGO76070 127 aa11.22□□□□□ -0.61
HLA-B-252ENST00000474381 PRO1854Q9UHT4 67 aa11.22□□□□□ -0.61
HLA-B-252ENST00000474381 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.61
HLA-B-252ENST00000474381 A0A0U1RQV1 116 aa11.21□□□□□ -0.61
HLA-B-252ENST00000474381 Q6JHZ5 121 aa11.21□□□□□ -0.61
HLA-B-252ENST00000474381 FXYD2P54710 66 aa11.2□□□□□ -0.62
HLA-B-252ENST00000474381 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
HLA-B-252ENST00000474381 HSD52Q0P140 79 aa11.19□□□□□ -0.62
HLA-B-252ENST00000474381 OCIAD2Q56VL3 154 aa11.19□□□□□ -0.62
HLA-B-252ENST00000474381 ASB16-AS1Q495Z4 193 aa11.17□□□□□ -0.62
HLA-B-252ENST00000474381 CLEC2BQ92478 149 aa11.16□□□□□ -0.62
HLA-B-252ENST00000474381 SNHG12Q9BXW3 62 aa11.16□□□□□ -0.62
HLA-B-252ENST00000474381 A0A1B0GX51 115 aa11.15□□□□□ -0.62
HLA-B-252ENST00000474381 XP32Q5T750 250 aa11.15□□□□□ -0.62
HLA-B-252ENST00000474381 UQCR10Q9UDW1 63 aa11.15□□□□□ -0.62
HLA-B-252ENST00000474381 TCL1BO95988 128 aa11.14□□□□□ -0.63
HLA-B-252ENST00000474381 SEC61BP60468 96 aaKnown RBP11.14□□□□□ -0.63
HLA-B-252ENST00000474381 FAM218AQ96MZ4 157 aa11.14□□□□□ -0.63
HLA-B-252ENST00000474381 C1orf195Q5TG92 126 aa11.13□□□□□ -0.63
HLA-B-252ENST00000474381 IGFL1Q6UW32 110 aa11.13□□□□□ -0.63
HLA-B-252ENST00000474381 GHRHP01286 108 aa11.11□□□□□ -0.63
HLA-B-252ENST00000474381 TRIAP1O43715 76 aa11.1□□□□□ -0.63
HLA-B-252ENST00000474381 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
HLA-B-252ENST00000474381 H3BUT2 72 aa11.05□□□□□ -0.64
HLA-B-252ENST00000474381 K7ERJ3 54 aa11.05□□□□□ -0.64
HLA-B-252ENST00000474381 NDUFV3P56181 108 aaKnown RBP11.05□□□□□ -0.64
HLA-B-252ENST00000474381 C9orf92A6NGG3 77 aa11.03□□□□□ -0.64
HLA-B-252ENST00000474381 COX6CP09669 75 aa11.03□□□□□ -0.64
HLA-B-252ENST00000474381 PSMB2P49721 201 aa11.03□□□□□ -0.64
HLA-B-252ENST00000474381 Q6Q795 121 aa11.02□□□□□ -0.65
HLA-B-252ENST00000474381 DNAL4O96015 105 aa11□□□□□ -0.65
HLA-B-252ENST00000474381 H3BQ85 93 aa10.99□□□□□ -0.65
HLA-B-252ENST00000474381 FABP2P12104 132 aa10.99□□□□□ -0.65
HLA-B-252ENST00000474381 H3BMG7 143 aa10.98□□□□□ -0.65
HLA-B-252ENST00000474381 TEN1Q86WV5 123 aa10.97□□□□□ -0.65
HLA-B-252ENST00000474381 KRTAP4-1Q9BYQ7 146 aa10.96□□□□□ -0.65
HLA-B-252ENST00000474381 ORMDL1Q9P0S3 153 aa10.96□□□□□ -0.65
HLA-B-252ENST00000474381 SS18L2Q9UHA2 77 aa10.96□□□□□ -0.65
HLA-B-252ENST00000474381 FAT4Q6V0I7 4981 aa10.95□□□□□ -0.66
HLA-B-252ENST00000474381 SMIM6P0DI80 62 aa10.94□□□□□ -0.66
HLA-B-252ENST00000474381 LST1O00453 97 aa10.93□□□□□ -0.66
HLA-B-252ENST00000474381 TMEM256-PLSCR3K7ERE1 68 aa10.92□□□□□ -0.66
HLA-B-252ENST00000474381 LCE2AQ5TA79 106 aaPredicted RBP10.92□□□□□ -0.66
HLA-B-252ENST00000474381 PCOTHQ58A44 107 aa10.9□□□□□ -0.66
HLA-B-252ENST00000474381 M0R143 59 aa10.89□□□□□ -0.67
HLA-B-252ENST00000474381 TRACP01848 142 aa10.89□□□□□ -0.67
HLA-B-252ENST00000474381 RPL37P61927 97 aaKnown RBP10.88□□□□□ -0.67
HLA-B-252ENST00000474381 A0A087WSZ3 146 aa10.87□□□□□ -0.67
HLA-B-252ENST00000474381 SCGB1C2P0DMR2 95 aa10.87□□□□□ -0.67
HLA-B-252ENST00000474381 A0A1W2PNM2 257 aa10.85□□□□□ -0.67
HLA-B-252ENST00000474381 UBE2V1Q13404 147 aa10.85□□□□□ -0.67
HLA-B-252ENST00000474381 ANKRD29Q8N6D5 301 aa10.85□□□□□ -0.67
HLA-B-252ENST00000474381 TRBV7-4A0A0J9YYF1 115 aa10.83□□□□□ -0.68
HLA-B-252ENST00000474381 OBSCN-AS1Q96MR7 158 aa10.79□□□□□ -0.68
HLA-B-252ENST00000474381 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
HLA-B-252ENST00000474381 Q96NJ1 140 aa10.78□□□□□ -0.68
HLA-B-252ENST00000474381 A0A1B0GV72 72 aa10.77□□□□□ -0.69
HLA-B-252ENST00000474381 Q75L30 129 aa10.76□□□□□ -0.69
HLA-B-252ENST00000474381 CCKP06307 115 aa10.75□□□□□ -0.69
HLA-B-252ENST00000474381 BAALC-AS2P0C853 105 aa10.73□□□□□ -0.69
HLA-B-252ENST00000474381 RBM3P98179 157 aaKnown RBP10.73□□□□□ -0.69
HLA-B-252ENST00000474381 ATXN8Q156A1 80 aa10.73□□□□□ -0.69
HLA-B-252ENST00000474381 LOC105371267A0A1B0GV96 52 aa10.72□□□□□ -0.69
HLA-B-252ENST00000474381 DSCR8Q96T75 97 aa10.71□□□□□ -0.69
HLA-B-252ENST00000474381 KRTAP19-2Q3LHN2 52 aa10.69□□□□□ -0.7
HLA-B-252ENST00000474381 LYRM7Q5U5X0 104 aa10.69□□□□□ -0.7
HLA-B-252ENST00000474381 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
HLA-B-252ENST00000474381 NAA38Q9BRA0 125 aaKnown RBP10.69□□□□□ -0.7
HLA-B-252ENST00000474381 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
HLA-B-252ENST00000474381 ATP11AUNQ6ZP68 121 aa10.68□□□□□ -0.7
HLA-B-252ENST00000474381 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
HLA-B-252ENST00000474381 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
HLA-B-252ENST00000474381 C21orf62-AS1Q17RA5 79 aa10.66□□□□□ -0.7
HLA-B-252ENST00000474381 LINC00472Q9H8W2 130 aa10.66□□□□□ -0.7
HLA-B-252ENST00000474381 C9JAW5 83 aa10.65□□□□□ -0.7
HLA-B-252ENST00000474381 A8MUU9 505 aa10.64□□□□□ -0.71
HLA-B-252ENST00000474381 VPS25Q9BRG1 176 aa10.64□□□□□ -0.71
HLA-B-252ENST00000474381 TRBV20-1A0A075B6N2 111 aa10.63□□□□□ -0.71
HLA-B-252ENST00000474381 JMJD7-PLA2G4BH0Y9G9 81 aa10.63□□□□□ -0.71
HLA-B-252ENST00000474381 BATFQ16520 125 aa10.62□□□□□ -0.71
HLA-B-252ENST00000474381 DSCR10P59022 87 aa10.6□□□□□ -0.71
HLA-B-252ENST00000474381 LINC00313P59037 77 aa10.6□□□□□ -0.71
HLA-B-252ENST00000474381 A0A1B0GW54 56 aa10.57□□□□□ -0.72
HLA-B-252ENST00000474381 PDE6GP18545 87 aa10.57□□□□□ -0.72
HLA-B-252ENST00000474381 DEFB116Q30KQ4 102 aa10.57□□□□□ -0.72
HLA-B-252ENST00000474381 LOC110117498A0A087WWA1 95 aa10.56□□□□□ -0.72
HLA-B-252ENST00000474381 Q6ZQT0 140 aa10.55□□□□□ -0.72
HLA-B-252ENST00000474381 C9orf118A6NHY6 69 aa10.54□□□□□ -0.72
HLA-B-252ENST00000474381 MT1HP80294 61 aa10.54□□□□□ -0.72
HLA-B-252ENST00000474381 KRTAP16-1A8MUX0 517 aa10.53□□□□□ -0.72
HLA-B-252ENST00000474381 J3KT08 172 aa10.53□□□□□ -0.72
HLA-B-252ENST00000474381 IGHV6-1A0A0B4J1U7 121 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms