RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 Q8N377 158 aa5.3□□□□□ -1.56
MCF2L-223ENST00000473345 KCNQ1DNQ9H478 68 aa5.3□□□□□ -1.56
MCF2L-223ENST00000473345 TRBV7-6A0A0J9YX20 115 aa5.29□□□□□ -1.56
MCF2L-223ENST00000473345 KRTAP4-16G5E9R7 235 aaPredicted RBP5.29□□□□□ -1.56
MCF2L-223ENST00000473345 H7C2G1 150 aa5.29□□□□□ -1.56
MCF2L-223ENST00000473345 PRYO14603 147 aa5.29□□□□□ -1.56
MCF2L-223ENST00000473345 SPINK1P00995 79 aa5.29□□□□□ -1.56
MCF2L-223ENST00000473345 FABP2P12104 132 aa5.29□□□□□ -1.56
MCF2L-223ENST00000473345 SPRR1AP35321 89 aa5.29□□□□□ -1.56
MCF2L-223ENST00000473345 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
MCF2L-223ENST00000473345 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
MCF2L-223ENST00000473345 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
MCF2L-223ENST00000473345 Q1RN00 199 aa5.29□□□□□ -1.56
MCF2L-223ENST00000473345 CBY1Q9Y3M2 126 aa5.29□□□□□ -1.56
MCF2L-223ENST00000473345 TRBV20-1A0A075B6N2 111 aa5.28□□□□□ -1.56
MCF2L-223ENST00000473345 TRAV23DV6A0A075B6W5 121 aa5.28□□□□□ -1.56
MCF2L-223ENST00000473345 H0YGX0 51 aa5.28□□□□□ -1.56
MCF2L-223ENST00000473345 COX6CP09669 75 aa5.28□□□□□ -1.56
MCF2L-223ENST00000473345 PSMB2P49721 201 aa5.28□□□□□ -1.56
MCF2L-223ENST00000473345 SMCR5Q8TEV8 140 aa5.28□□□□□ -1.56
MCF2L-223ENST00000473345 K7EP34 96 aa5.27□□□□□ -1.57
MCF2L-223ENST00000473345 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
MCF2L-223ENST00000473345 TCL1BO95988 128 aa5.27□□□□□ -1.57
MCF2L-223ENST00000473345 C6orf99Q4VX62 202 aa5.27□□□□□ -1.57
MCF2L-223ENST00000473345 LYRM7Q5U5X0 104 aa5.27□□□□□ -1.57
MCF2L-223ENST00000473345 LST1O00453 97 aa5.26□□□□□ -1.57
MCF2L-223ENST00000473345 ZNF73O43830 326 aaPredicted RBP5.26□□□□□ -1.57
MCF2L-223ENST00000473345 LINC00483Q53H64 154 aa5.26□□□□□ -1.57
MCF2L-223ENST00000473345 SPCS1Q9Y6A9 102 aa5.26□□□□□ -1.57
MCF2L-223ENST00000473345 A0A1B0GX51 115 aa5.25□□□□□ -1.57
MCF2L-223ENST00000473345 SCGB1C2P0DMR2 95 aa5.25□□□□□ -1.57
MCF2L-223ENST00000473345 ELOF1P60002 83 aaKnown RBP5.25□□□□□ -1.57
MCF2L-223ENST00000473345 UBE2V1Q13404 147 aa5.25□□□□□ -1.57
MCF2L-223ENST00000473345 VAMP3Q15836 100 aa5.25□□□□□ -1.57
MCF2L-223ENST00000473345 FAM218AQ96MZ4 157 aa5.25□□□□□ -1.57
MCF2L-223ENST00000473345 ETDCA0A1B0GVM5 59 aa5.24□□□□□ -1.57
MCF2L-223ENST00000473345 MOBPQ13875 183 aa5.24□□□□□ -1.57
MCF2L-223ENST00000473345 GTF2H5Q6ZYL4 71 aa5.24□□□□□ -1.57
MCF2L-223ENST00000473345 CLEC2BQ92478 149 aa5.24□□□□□ -1.57
MCF2L-223ENST00000473345 TRACP01848 142 aa5.23□□□□□ -1.57
MCF2L-223ENST00000473345 ATXN8Q156A1 80 aa5.23□□□□□ -1.57
MCF2L-223ENST00000473345 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
MCF2L-223ENST00000473345 LINC00575Q6W349 94 aa5.23□□□□□ -1.57
MCF2L-223ENST00000473345 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
MCF2L-223ENST00000473345 IGLV9-49A0A0B4J1Y8 123 aa5.22□□□□□ -1.57
MCF2L-223ENST00000473345 B5MCH6 92 aa5.22□□□□□ -1.57
MCF2L-223ENST00000473345 H3BMG7 143 aa5.22□□□□□ -1.57
MCF2L-223ENST00000473345 SLC25A20O43772 301 aa5.22□□□□□ -1.57
MCF2L-223ENST00000473345 COX7BP24311 80 aa5.22□□□□□ -1.57
MCF2L-223ENST00000473345 GAGE2AQ6NT46 116 aa5.22□□□□□ -1.57
MCF2L-223ENST00000473345 PRO0461Q9UI25 63 aa5.22□□□□□ -1.57
MCF2L-223ENST00000473345 Q6ZRX8 168 aa5.21□□□□□ -1.58
MCF2L-223ENST00000473345 Q9BRP9 147 aa5.21□□□□□ -1.58
MCF2L-223ENST00000473345 FLGP20930 4061 aaPredicted RBP5.21□□□□□ -1.58
MCF2L-223ENST00000473345 IGLV8-61A0A075B6I0 122 aa5.2□□□□□ -1.58
MCF2L-223ENST00000473345 hADV29S1A0JD25 119 aa5.2□□□□□ -1.58
MCF2L-223ENST00000473345 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
MCF2L-223ENST00000473345 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
MCF2L-223ENST00000473345 F8W1H4 67 aa5.19□□□□□ -1.58
MCF2L-223ENST00000473345 H3BS24 57 aa5.19□□□□□ -1.58
MCF2L-223ENST00000473345 DHRS4-AS1Q9P1J3 65 aa5.19□□□□□ -1.58
MCF2L-223ENST00000473345 C9JAW5 83 aa5.18□□□□□ -1.58
MCF2L-223ENST00000473345 C9orf92A6NGG3 77 aa5.17□□□□□ -1.58
MCF2L-223ENST00000473345 H3BT86 120 aa5.17□□□□□ -1.58
MCF2L-223ENST00000473345 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.17□□□□□ -1.58
MCF2L-223ENST00000473345 SNCGO76070 127 aa5.16□□□□□ -1.58
MCF2L-223ENST00000473345 DNAL4O96015 105 aa5.16□□□□□ -1.58
MCF2L-223ENST00000473345 OCIAD2Q56VL3 154 aa5.16□□□□□ -1.58
MCF2L-223ENST00000473345 H3BQ85 93 aa5.15□□□□□ -1.59
MCF2L-223ENST00000473345 BAALC-AS2P0C853 105 aa5.15□□□□□ -1.59
MCF2L-223ENST00000473345 Q6ZQY7 126 aa5.15□□□□□ -1.59
MCF2L-223ENST00000473345 ANKRD29Q8N6D5 301 aa5.15□□□□□ -1.59
MCF2L-223ENST00000473345 ST20-AS1Q8NBB2 130 aa5.15□□□□□ -1.59
MCF2L-223ENST00000473345 ORMDL1Q9P0S3 153 aa5.15□□□□□ -1.59
MCF2L-223ENST00000473345 IGLV5-48A0A075B6I7 105 aa5.14□□□□□ -1.59
MCF2L-223ENST00000473345 MTURNQ8N3F0 131 aa5.14□□□□□ -1.59
MCF2L-223ENST00000473345 PPDPFLQ8WWR9 84 aa5.14□□□□□ -1.59
MCF2L-223ENST00000473345 LIMD2Q9BT23 127 aa5.14□□□□□ -1.59
MCF2L-223ENST00000473345 TMEM256-PLSCR3K7ERE1 68 aa5.13□□□□□ -1.59
MCF2L-223ENST00000473345 SPRR1BP22528 89 aa5.12□□□□□ -1.59
MCF2L-223ENST00000473345 OBSCN-AS1Q96MR7 158 aa5.12□□□□□ -1.59
MCF2L-223ENST00000473345 ETDBQ3ZM63 59 aa5.11□□□□□ -1.59
MCF2L-223ENST00000473345 C9orf153Q5TBE3 101 aa5.11□□□□□ -1.59
MCF2L-223ENST00000473345 HRCT1Q6UXD1 115 aa5.11□□□□□ -1.59
MCF2L-223ENST00000473345 TEN1Q86WV5 123 aa5.11□□□□□ -1.59
MCF2L-223ENST00000473345 M0R2T5 61 aa5.1□□□□□ -1.59
MCF2L-223ENST00000473345 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
MCF2L-223ENST00000473345 TEX49A0A1B0GTD5 131 aa5.09□□□□□ -1.59
MCF2L-223ENST00000473345 CD164Q04900 197 aa5.09□□□□□ -1.59
MCF2L-223ENST00000473345 SMIM29Q86T20 159 aa5.09□□□□□ -1.59
MCF2L-223ENST00000473345 NDUFV3P56181 108 aaKnown RBP5.08□□□□□ -1.6
MCF2L-223ENST00000473345 LAMTOR3Q9UHA4 124 aa5.08□□□□□ -1.6
MCF2L-223ENST00000473345 A0A0G2JQZ4 141 aa5.07□□□□□ -1.6
MCF2L-223ENST00000473345 JMJD7-PLA2G4BH0Y9G9 81 aa5.07□□□□□ -1.6
MCF2L-223ENST00000473345 Q5XG85 94 aa5.07□□□□□ -1.6
MCF2L-223ENST00000473345 USH2AO75445 5202 aa5.07□□□□□ -1.6
MCF2L-223ENST00000473345 DEFB105AQ8NG35 78 aa5.06□□□□□ -1.6
MCF2L-223ENST00000473345 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
MCF2L-223ENST00000473345 SSPOA2VEC9 5147 aa5.05□□□□□ -1.6
MCF2L-223ENST00000473345 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms