RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 HIGD1BQ9P298 99 aa12.41□□□□□ -0.42
PTP4A1-203ENST00000473334 CFC1BP0CG36 223 aa12.37□□□□□ -0.43
PTP4A1-203ENST00000473334 CFC1P0CG37 223 aa12.37□□□□□ -0.43
PTP4A1-203ENST00000473334 LCE2AQ5TA79 106 aaPredicted RBP12.37□□□□□ -0.43
PTP4A1-203ENST00000473334 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.37□□□□□ -0.43
PTP4A1-203ENST00000473334 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
PTP4A1-203ENST00000473334 C2orf91Q6ZV80 131 aa12.35□□□□□ -0.43
PTP4A1-203ENST00000473334 C9orf92A6NGG3 77 aa12.34□□□□□ -0.43
PTP4A1-203ENST00000473334 C1orf195Q5TG92 126 aa12.34□□□□□ -0.43
PTP4A1-203ENST00000473334 KRTAP4-1Q9BYQ7 146 aa12.34□□□□□ -0.43
PTP4A1-203ENST00000473334 A0A0B4J2C4 111 aa12.33□□□□□ -0.44
PTP4A1-203ENST00000473334 PPDPFLQ8WWR9 84 aa12.33□□□□□ -0.44
PTP4A1-203ENST00000473334 IGLV8-61A0A075B6I0 122 aa12.32□□□□□ -0.44
PTP4A1-203ENST00000473334 Q6JHZ5 121 aa12.32□□□□□ -0.44
PTP4A1-203ENST00000473334 TCL1BO95988 128 aa12.31□□□□□ -0.44
PTP4A1-203ENST00000473334 CLEC2BQ92478 149 aa12.29□□□□□ -0.44
PTP4A1-203ENST00000473334 OCIAD2Q56VL3 154 aa12.28□□□□□ -0.44
PTP4A1-203ENST00000473334 IGFL1Q6UW32 110 aa12.28□□□□□ -0.44
PTP4A1-203ENST00000473334 CEND1Q8N111 149 aa12.28□□□□□ -0.44
PTP4A1-203ENST00000473334 H0YGX0 51 aa12.26□□□□□ -0.45
PTP4A1-203ENST00000473334 SNHG12Q9BXW3 62 aa12.26□□□□□ -0.45
PTP4A1-203ENST00000473334 TMEM238LA0A1B0GVL6 79 aa12.25□□□□□ -0.45
PTP4A1-203ENST00000473334 A6NJY4 79 aa12.25□□□□□ -0.45
PTP4A1-203ENST00000473334 SNCGO76070 127 aa12.25□□□□□ -0.45
PTP4A1-203ENST00000473334 TRBV7-7A0A0K0K1E9 115 aa12.23□□□□□ -0.45
PTP4A1-203ENST00000473334 PYY3Q5JQD4 70 aa12.22□□□□□ -0.45
PTP4A1-203ENST00000473334 PRO1854Q9UHT4 67 aa12.22□□□□□ -0.45
PTP4A1-203ENST00000473334 FXYD2P54710 66 aa12.21□□□□□ -0.45
PTP4A1-203ENST00000473334 PCOTHQ58A44 107 aa12.21□□□□□ -0.45
PTP4A1-203ENST00000473334 FAM218AQ96MZ4 157 aa12.21□□□□□ -0.45
PTP4A1-203ENST00000473334 H3BUT2 72 aa12.19□□□□□ -0.46
PTP4A1-203ENST00000473334 A0A1B0GX51 115 aa12.16□□□□□ -0.46
PTP4A1-203ENST00000473334 HSD52Q0P140 79 aa12.14□□□□□ -0.47
PTP4A1-203ENST00000473334 NDUFV3P56181 108 aaKnown RBP12.13□□□□□ -0.47
PTP4A1-203ENST00000473334 TMA7Q9Y2S6 64 aaKnown RBP12.13□□□□□ -0.47
PTP4A1-203ENST00000473334 TRIAP1O43715 76 aa12.12□□□□□ -0.47
PTP4A1-203ENST00000473334 GHRHP01286 108 aa12.12□□□□□ -0.47
PTP4A1-203ENST00000473334 KRTAP9-2Q9BYQ4 174 aa12.12□□□□□ -0.47
PTP4A1-203ENST00000473334 RPL37P61927 97 aaKnown RBP12.11□□□□□ -0.47
PTP4A1-203ENST00000473334 Q6Q795 121 aa12.1□□□□□ -0.47
PTP4A1-203ENST00000473334 LST1O00453 97 aa12.07□□□□□ -0.48
PTP4A1-203ENST00000473334 FABP2P12104 132 aa12.06□□□□□ -0.48
PTP4A1-203ENST00000473334 TEN1Q86WV5 123 aa12.06□□□□□ -0.48
PTP4A1-203ENST00000473334 SS18L2Q9UHA2 77 aa12.06□□□□□ -0.48
PTP4A1-203ENST00000473334 H3BMG7 143 aa12.05□□□□□ -0.48
PTP4A1-203ENST00000473334 K7ERJ3 54 aa12.05□□□□□ -0.48
PTP4A1-203ENST00000473334 UQCR10Q9UDW1 63 aa12.05□□□□□ -0.48
PTP4A1-203ENST00000473334 PSMB2P49721 201 aa12.03□□□□□ -0.48
PTP4A1-203ENST00000473334 DNAL4O96015 105 aa12.02□□□□□ -0.49
PTP4A1-203ENST00000473334 KRTAP19-2Q3LHN2 52 aa12.01□□□□□ -0.49
PTP4A1-203ENST00000473334 LCE2CQ5TA81 110 aa12.01□□□□□ -0.49
PTP4A1-203ENST00000473334 COX6CP09669 75 aa11.99□□□□□ -0.49
PTP4A1-203ENST00000473334 OBSCN-AS1Q96MR7 158 aa11.99□□□□□ -0.49
PTP4A1-203ENST00000473334 ORMDL1Q9P0S3 153 aa11.99□□□□□ -0.49
PTP4A1-203ENST00000473334 A0A087WSZ3 146 aa11.98□□□□□ -0.49
PTP4A1-203ENST00000473334 H3BQ85 93 aa11.97□□□□□ -0.49
PTP4A1-203ENST00000473334 A0A1W2PNM2 257 aa11.93□□□□□ -0.5
PTP4A1-203ENST00000473334 Q75L30 129 aa11.93□□□□□ -0.5
PTP4A1-203ENST00000473334 TMEM256-PLSCR3K7ERE1 68 aa11.92□□□□□ -0.5
PTP4A1-203ENST00000473334 ANKRD29Q8N6D5 301 aa11.9□□□□□ -0.5
PTP4A1-203ENST00000473334 Q96NJ1 140 aa11.9□□□□□ -0.5
PTP4A1-203ENST00000473334 A0A1B0GV72 72 aa11.89□□□□□ -0.51
PTP4A1-203ENST00000473334 ATP11AUNQ6ZP68 121 aa11.88□□□□□ -0.51
PTP4A1-203ENST00000473334 TRBV7-4A0A0J9YYF1 115 aa11.87□□□□□ -0.51
PTP4A1-203ENST00000473334 MT1HP80294 61 aa11.87□□□□□ -0.51
PTP4A1-203ENST00000473334 TRACP01848 142 aa11.85□□□□□ -0.51
PTP4A1-203ENST00000473334 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
PTP4A1-203ENST00000473334 UBE2V1Q13404 147 aa11.85□□□□□ -0.51
PTP4A1-203ENST00000473334 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
PTP4A1-203ENST00000473334 KRTAP9-6A0A140TA67 174 aa11.81□□□□□ -0.52
PTP4A1-203ENST00000473334 C20orf166-AS1Q96NR2 134 aa11.81□□□□□ -0.52
PTP4A1-203ENST00000473334 CCKP06307 115 aa11.8□□□□□ -0.52
PTP4A1-203ENST00000473334 COX6B2Q6YFQ2 88 aa11.79□□□□□ -0.52
PTP4A1-203ENST00000473334 A8MUU9 505 aa11.78□□□□□ -0.52
PTP4A1-203ENST00000473334 DSCR10P59022 87 aa11.77□□□□□ -0.53
PTP4A1-203ENST00000473334 IGKV4-1P06312 121 aa11.76□□□□□ -0.53
PTP4A1-203ENST00000473334 M0R143 59 aa11.75□□□□□ -0.53
PTP4A1-203ENST00000473334 RBM3P98179 157 aaKnown RBP11.73□□□□□ -0.53
PTP4A1-203ENST00000473334 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
PTP4A1-203ENST00000473334 SMIM6P0DI80 62 aa11.71□□□□□ -0.53
PTP4A1-203ENST00000473334 LINC00313P59037 77 aa11.71□□□□□ -0.53
PTP4A1-203ENST00000473334 LCE2DQ5TA82 110 aaPredicted RBP11.71□□□□□ -0.53
PTP4A1-203ENST00000473334 VPS25Q9BRG1 176 aa11.71□□□□□ -0.53
PTP4A1-203ENST00000473334 BAALC-AS2P0C853 105 aa11.7□□□□□ -0.54
PTP4A1-203ENST00000473334 DSCR8Q96T75 97 aa11.7□□□□□ -0.54
PTP4A1-203ENST00000473334 FLGP20930 4061 aaPredicted RBP11.69□□□□□ -0.54
PTP4A1-203ENST00000473334 DEFB116Q30KQ4 102 aa11.69□□□□□ -0.54
PTP4A1-203ENST00000473334 M0R2T5 61 aa11.67□□□□□ -0.54
PTP4A1-203ENST00000473334 NAA38Q9BRA0 125 aaKnown RBP11.66□□□□□ -0.54
PTP4A1-203ENST00000473334 KRTAP16-1A8MUX0 517 aa11.65□□□□□ -0.54
PTP4A1-203ENST00000473334 ATXN8Q156A1 80 aa11.65□□□□□ -0.54
PTP4A1-203ENST00000473334 KRTAP10-6P60371 365 aaPredicted RBP11.64□□□□□ -0.55
PTP4A1-203ENST00000473334 C9JAW5 83 aa11.63□□□□□ -0.55
PTP4A1-203ENST00000473334 LORP23490 312 aaPredicted RBP11.63□□□□□ -0.55
PTP4A1-203ENST00000473334 NOTCH2NLQ7Z3S9 236 aa11.62□□□□□ -0.55
PTP4A1-203ENST00000473334 IGHV6-1A0A0B4J1U7 121 aa11.61□□□□□ -0.55
PTP4A1-203ENST00000473334 C21orf62-AS1Q17RA5 79 aa11.61□□□□□ -0.55
PTP4A1-203ENST00000473334 TSTD3H0UI37 97 aa11.57□□□□□ -0.56
PTP4A1-203ENST00000473334 JMJD7-PLA2G4BH0Y9G9 81 aa11.57□□□□□ -0.56
PTP4A1-203ENST00000473334 TRBV20-1A0A075B6N2 111 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms