RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 FAM236DA0A1B0GTK5 79 aa3.86□□□□□ -1.79
LSAMP-202ENST00000473171 LEPROTO15243 131 aa3.86□□□□□ -1.79
LSAMP-202ENST00000473171 FAM236CP0DP71 79 aa3.86□□□□□ -1.79
LSAMP-202ENST00000473171 COX7BP24311 80 aa3.86□□□□□ -1.79
LSAMP-202ENST00000473171 RHEBQ15382 184 aa3.86□□□□□ -1.79
LSAMP-202ENST00000473171 J3QQQ9 107 aa3.85□□□□□ -1.79
LSAMP-202ENST00000473171 ELOF1P60002 83 aaKnown RBP3.85□□□□□ -1.79
LSAMP-202ENST00000473171 COX19Q49B96 90 aa3.85□□□□□ -1.79
LSAMP-202ENST00000473171 ADAMTSL4-AS1Q5T5F5 129 aa3.85□□□□□ -1.79
LSAMP-202ENST00000473171 C20orf166-AS1Q96NR2 134 aa3.85□□□□□ -1.79
LSAMP-202ENST00000473171 CBY1Q9Y3M2 126 aa3.85□□□□□ -1.79
LSAMP-202ENST00000473171 LGALS3P17931 250 aaKnown RBP3.84□□□□□ -1.79
LSAMP-202ENST00000473171 IFITM2Q01629 132 aa3.84□□□□□ -1.79
LSAMP-202ENST00000473171 C6orf99Q4VX62 202 aa3.84□□□□□ -1.79
LSAMP-202ENST00000473171 C10orf91Q5T1B1 145 aa3.84□□□□□ -1.79
LSAMP-202ENST00000473171 Q96NJ1 140 aa3.84□□□□□ -1.79
LSAMP-202ENST00000473171 TRAPPC1Q9Y5R8 145 aa3.84□□□□□ -1.79
LSAMP-202ENST00000473171 A0A0J9YXY3 114 aa3.82□□□□□ -1.8
LSAMP-202ENST00000473171 IGLV5-48A0A075B6I7 105 aa3.81□□□□□ -1.8
LSAMP-202ENST00000473171 NMUP48645 174 aa3.81□□□□□ -1.8
LSAMP-202ENST00000473171 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
LSAMP-202ENST00000473171 IGFL1Q6UW32 110 aa3.81□□□□□ -1.8
LSAMP-202ENST00000473171 PMCHL2Q9BQD1 86 aa3.81□□□□□ -1.8
LSAMP-202ENST00000473171 SPANXDQ9BXN6 97 aa3.81□□□□□ -1.8
LSAMP-202ENST00000473171 SPANXCQ9NY87 97 aa3.81□□□□□ -1.8
LSAMP-202ENST00000473171 TMEM218A2RU14 115 aa3.8□□□□□ -1.8
LSAMP-202ENST00000473171 HERVK_113P61574 105 aa3.8□□□□□ -1.8
LSAMP-202ENST00000473171 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
LSAMP-202ENST00000473171 LINC00308Q8TCZ7 52 aa3.8□□□□□ -1.8
LSAMP-202ENST00000473171 CHCHD1Q96BP2 118 aaKnown RBP3.79□□□□□ -1.8
LSAMP-202ENST00000473171 NEBP20929 6669 aa3.79□□□□□ -1.8
LSAMP-202ENST00000473171 TRBV7-7A0A0K0K1E9 115 aa3.78□□□□□ -1.8
LSAMP-202ENST00000473171 PLNP26678 52 aa3.78□□□□□ -1.8
LSAMP-202ENST00000473171 LINC00518Q8N0U6 118 aa3.78□□□□□ -1.8
LSAMP-202ENST00000473171 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
LSAMP-202ENST00000473171 A8MUU9 505 aa3.77□□□□□ -1.81
LSAMP-202ENST00000473171 F8WEM9 126 aa3.77□□□□□ -1.81
LSAMP-202ENST00000473171 HSBP1O75506 76 aa3.77□□□□□ -1.81
LSAMP-202ENST00000473171 DPM2O94777 84 aa3.77□□□□□ -1.81
LSAMP-202ENST00000473171 A0A1B0GWB2 263 aa3.76□□□□□ -1.81
LSAMP-202ENST00000473171 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
LSAMP-202ENST00000473171 KRTAP16-1A8MUX0 517 aa3.76□□□□□ -1.81
LSAMP-202ENST00000473171 IGKCP01834 107 aa3.76□□□□□ -1.81
LSAMP-202ENST00000473171 RBM12B-AS1Q9P1G2 102 aa3.76□□□□□ -1.81
LSAMP-202ENST00000473171 TRBV7-6A0A0J9YX20 115 aa3.75□□□□□ -1.81
LSAMP-202ENST00000473171 HRES1P13985 223 aa3.75□□□□□ -1.81
LSAMP-202ENST00000473171 UBE2V1Q13404 147 aa3.75□□□□□ -1.81
LSAMP-202ENST00000473171 CLEC2BQ92478 149 aa3.75□□□□□ -1.81
LSAMP-202ENST00000473171 LST1O00453 97 aa3.74□□□□□ -1.81
LSAMP-202ENST00000473171 SERF1AO75920 110 aa3.74□□□□□ -1.81
LSAMP-202ENST00000473171 LEPROTL1O95214 131 aa3.74□□□□□ -1.81
LSAMP-202ENST00000473171 UQCC3Q6UW78 93 aa3.74□□□□□ -1.81
LSAMP-202ENST00000473171 A6NDN8 102 aa3.73□□□□□ -1.81
LSAMP-202ENST00000473171 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
LSAMP-202ENST00000473171 E9PLD3 99 aa3.73□□□□□ -1.81
LSAMP-202ENST00000473171 FABP4P15090 132 aa3.73□□□□□ -1.81
LSAMP-202ENST00000473171 DSCR10P59022 87 aa3.73□□□□□ -1.81
LSAMP-202ENST00000473171 CLLU1Q5K131 121 aa3.73□□□□□ -1.81
LSAMP-202ENST00000473171 Q6JHZ5 121 aa3.73□□□□□ -1.81
LSAMP-202ENST00000473171 SLC7A5P1Q8MH63 180 aa3.73□□□□□ -1.81
LSAMP-202ENST00000473171 TIMM17BO60830 172 aa3.72□□□□□ -1.81
LSAMP-202ENST00000473171 TTTY13Q9BZ97 58 aa3.72□□□□□ -1.81
LSAMP-202ENST00000473171 Q6ZVH6 145 aa3.71□□□□□ -1.82
LSAMP-202ENST00000473171 NHP2Q9NX24 153 aaKnown RBP3.71□□□□□ -1.82
LSAMP-202ENST00000473171 TRAV13-2A0A0B4J235 113 aa3.7□□□□□ -1.82
LSAMP-202ENST00000473171 A4D1N5 150 aa3.7□□□□□ -1.82
LSAMP-202ENST00000473171 ZNF815PA8K554 130 aa3.7□□□□□ -1.82
LSAMP-202ENST00000473171 H3BUT2 72 aa3.7□□□□□ -1.82
LSAMP-202ENST00000473171 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
LSAMP-202ENST00000473171 HSPB8Q9UJY1 196 aa3.7□□□□□ -1.82
LSAMP-202ENST00000473171 OCIAD2Q56VL3 154 aa3.69□□□□□ -1.82
LSAMP-202ENST00000473171 Q6ZQY7 126 aa3.69□□□□□ -1.82
LSAMP-202ENST00000473171 SMIM11BQ8TCY0 68 aa3.69□□□□□ -1.82
LSAMP-202ENST00000473171 A8MWP4 228 aa3.67□□□□□ -1.82
LSAMP-202ENST00000473171 SNRPEP62304 92 aaKnown RBP3.67□□□□□ -1.82
LSAMP-202ENST00000473171 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
LSAMP-202ENST00000473171 LINC00575Q6W349 94 aa3.66□□□□□ -1.82
LSAMP-202ENST00000473171 MTURNQ8N3F0 131 aa3.66□□□□□ -1.82
LSAMP-202ENST00000473171 SIGMAR1Q99720 223 aa3.66□□□□□ -1.82
LSAMP-202ENST00000473171 SS18L2Q9UHA2 77 aa3.66□□□□□ -1.82
LSAMP-202ENST00000473171 A0A087WSZ3 146 aa3.65□□□□□ -1.83
LSAMP-202ENST00000473171 hADV29S1A0JD25 119 aa3.65□□□□□ -1.83
LSAMP-202ENST00000473171 APOC3P02656 99 aa3.65□□□□□ -1.83
LSAMP-202ENST00000473171 SCGB1D4Q6XE38 83 aa3.65□□□□□ -1.83
LSAMP-202ENST00000473171 YPEL4Q96NS1 127 aa3.65□□□□□ -1.83
LSAMP-202ENST00000473171 COLCA2A8K830 154 aa3.64□□□□□ -1.83
LSAMP-202ENST00000473171 SCGB1D1O95968 90 aa3.64□□□□□ -1.83
LSAMP-202ENST00000473171 TRGC2P03986 189 aa3.64□□□□□ -1.83
LSAMP-202ENST00000473171 LINC00313P59037 77 aa3.64□□□□□ -1.83
LSAMP-202ENST00000473171 MUSTN1Q8IVN3 82 aa3.64□□□□□ -1.83
LSAMP-202ENST00000473171 SNHG12Q9BXW3 62 aa3.64□□□□□ -1.83
LSAMP-202ENST00000473171 A6NN06 94 aa3.63□□□□□ -1.83
LSAMP-202ENST00000473171 VAMP3Q15836 100 aa3.63□□□□□ -1.83
LSAMP-202ENST00000473171 SYS1-DBNDD2H3BUS1 97 aa3.62□□□□□ -1.83
LSAMP-202ENST00000473171 SNAPINO95295 136 aa3.62□□□□□ -1.83
LSAMP-202ENST00000473171 IFITM1P13164 125 aa3.62□□□□□ -1.83
LSAMP-202ENST00000473171 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
LSAMP-202ENST00000473171 TEN1Q86WV5 123 aa3.61□□□□□ -1.83
LSAMP-202ENST00000473171 COPS9Q8WXC6 57 aa3.61□□□□□ -1.83
LSAMP-202ENST00000473171 KMT2DO14686 5537 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms