RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 H0Y9P7 68 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 APELAP0DMC3 54 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 CCL5P13501 91 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 Q6ZQY7 126 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 COA5Q86WW8 74 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 TP53AIP1Q9HCN2 124 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 ZFHX4Q86UP3 3567 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 KALRNO60229 2985 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 PTPRZ1P23471 2315 aaPredicted RBP1.61□□□□□ -2.15
CDHR3-208ENST00000471910 SPTBN4Q9H254 2564 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 STAB1Q9NY15 2570 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 CREBBPQ92793 2442 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 CCDC168Q8NDH2 2452 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 ANKHD1Q8IWZ3 2542 aaKnown RBP1.6□□□□□ -2.15
CDHR3-208ENST00000471910 A0A087WSZ3 146 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 IGLV1-51P01701 117 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 PRB1P04280 392 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 SPATA8Q6RVD6 105 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 RHPN1-AS1Q9BWJ2 59 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 U3KQA8 63 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 SPTA1P02549 2419 aa1.6□□□□□ -2.15
CDHR3-208ENST00000471910 EP300Q09472 2414 aaPredicted RBP1.6□□□□□ -2.15
CDHR3-208ENST00000471910 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.6□□□□□ -2.152e-6■■■■■ 30.5
CDHR3-208ENST00000471910 ALMS1Q8TCU4 4167 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 NCOR1O75376 2440 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 CFAP54Q96N23 3096 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 PRRC2CQ9Y520 2896 aaKnown RBP1.59□□□□□ -2.15
CDHR3-208ENST00000471910 ZNF292O60281 2723 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 M0R2N4 97 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 MSMBP08118 114 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 ROMO1P60602 79 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 SPAG11AQ6PDA7 123 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 FAM215AQ9Y5M1 114 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 NOTCH1P46531 2555 aa1.59□□□□□ -2.15
CDHR3-208ENST00000471910 MUC6Q6W4X9 2439 aa1.59□□□□□ -2.16
CDHR3-208ENST00000471910 XIRP2A4UGR9 3374 aa1.59□□□□□ -2.16
CDHR3-208ENST00000471910 WDFY4Q6ZS81 3184 aa1.59□□□□□ -2.16
CDHR3-208ENST00000471910 FRYLO94915 3013 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 CHD7Q9P2D1 2997 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 DNAH14Q0VDD8 3507 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 USP34Q70CQ2 3546 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 MKI67P46013 3256 aaKnown RBP1.58□□□□□ -2.16
CDHR3-208ENST00000471910 LINC00959A0A1B0GUT2 108 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 UQCR11O14957 56 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 C5orf56Q8N8D9 126 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 TOMM7Q9P0U1 55 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 LRRK2Q5S007 2527 aa1.58□□□□□ -2.16
CDHR3-208ENST00000471910 DSPP15924 2871 aaKnown RBP1.57□□□□□ -2.16
CDHR3-208ENST00000471910 SPTAN1Q13813 2472 aaKnown RBP1.57□□□□□ -2.16
CDHR3-208ENST00000471910 H3BUX3 64 aa1.57□□□□□ -2.16
CDHR3-208ENST00000471910 DEFB131AP59861 70 aa1.57□□□□□ -2.16
CDHR3-208ENST00000471910 DEFB112Q30KQ8 113 aa1.57□□□□□ -2.16
CDHR3-208ENST00000471910 FDCSPQ8NFU4 85 aa1.57□□□□□ -2.16
CDHR3-208ENST00000471910 TRIOO75962 3097 aa1.57□□□□□ -2.16
CDHR3-208ENST00000471910 HTTP42858 3142 aa1.57□□□□□ -2.16
CDHR3-208ENST00000471910 CEP290O15078 2479 aa1.57□□□□□ -2.16
CDHR3-208ENST00000471910 LYNX1G3V0Z9 82 aa1.56□□□□□ -2.16
CDHR3-208ENST00000471910 SPINK7P58062 85 aa1.56□□□□□ -2.16
CDHR3-208ENST00000471910 SPINK13Q1W4C9 94 aa1.56□□□□□ -2.16
CDHR3-208ENST00000471910 C1orf137Q5JT78 98 aa1.56□□□□□ -2.16
CDHR3-208ENST00000471910 C1orf134Q5TEV5 83 aa1.56□□□□□ -2.16
CDHR3-208ENST00000471910 PRUNE2Q8WUY3 3088 aa1.56□□□□□ -2.16
CDHR3-208ENST00000471910 OTOGLQ3ZCN5 2332 aa1.56□□□□□ -2.16
CDHR3-208ENST00000471910 CHD9Q3L8U1 2897 aa1.56□□□□□ -2.16
CDHR3-208ENST00000471910 LAMA1P25391 3075 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 C5orf42Q9H799 3197 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 TACC2O95359 2948 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 A0A0G2JQZ4 141 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 K7EQZ3 153 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 PRB4P10163 310 aaPredicted RBP1.55□□□□□ -2.16
CDHR3-208ENST00000471910 ACYP2P14621 99 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 DMAC1Q96GE9 116 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 POLQO75417 2590 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 SPTBN5Q9NRC6 3674 aaKnown RBP1.55□□□□□ -2.16
CDHR3-208ENST00000471910 GVINP1Q7Z2Y8 2422 aa1.55□□□□□ -2.16
CDHR3-208ENST00000471910 COL6A5A8TX70 2615 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 CFAP46Q8IYW2 2715 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 CELSR3Q9NYQ7 3312 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 IGKV3-7A0A075B6H7 116 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 G3V318 75 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 MIR22HGQ0VDD5 57 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 TPRXLQ17RH7 258 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 CSAG1Q6PB30 78 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 DEFB119Q8N690 84 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 DEFB104AQ8WTQ1 72 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 PRO2289Q9P1D8 64 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 VWFP04275 2813 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 MAP1AP78559 2803 aaPredicted RBP1.54□□□□□ -2.16
CDHR3-208ENST00000471910 AKAP13Q12802 2813 aa1.54□□□□□ -2.16
CDHR3-208ENST00000471910 UBR4Q5T4S7 5183 aa1.53□□□□□ -2.16
CDHR3-208ENST00000471910 A0A1B0GU69 56 aa1.53□□□□□ -2.16
CDHR3-208ENST00000471910 B4DSR2 109 aa1.53□□□□□ -2.16
CDHR3-208ENST00000471910 FN1P02751 2386 aaKnown RBP1.53□□□□□ -2.16
CDHR3-208ENST00000471910 ANGP03950 147 aaKnown RBP1.53□□□□□ -2.16
CDHR3-208ENST00000471910 SPRR1AP35321 89 aa1.53□□□□□ -2.16
CDHR3-208ENST00000471910 DEFB1P60022 68 aa1.53□□□□□ -2.16
CDHR3-208ENST00000471910 RPL37AP61513 92 aaKnown RBP1.53□□□□□ -2.16
CDHR3-208ENST00000471910 Q6ZRX8 168 aa1.53□□□□□ -2.16
CDHR3-208ENST00000471910 NCOR2Q9Y618 2525 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms