RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ZNF720Q7Z2F6 126 aa-3.36□□□□□ -2.95
PRPF40A-207ENST00000471701 SERP2Q8N6R1 65 aa-3.36□□□□□ -2.95
PRPF40A-207ENST00000471701 TMEM203Q969S6 136 aa-3.36□□□□□ -2.95
PRPF40A-207ENST00000471701 GAFA1Q96PS6 74 aa-3.36□□□□□ -2.95
PRPF40A-207ENST00000471701 HMGN1P05114 100 aa-3.37□□□□□ -2.95
PRPF40A-207ENST00000471701 TRRAPQ9Y4A5 3859 aa-3.39□□□□□ -2.95
PRPF40A-207ENST00000471701 ATOX1O00244 68 aa-3.39□□□□□ -2.95
PRPF40A-207ENST00000471701 POLR1AO95602 1720 aaPredicted RBP-3.39□□□□□ -2.95
PRPF40A-207ENST00000471701 MYH4Q9Y623 1939 aa-3.4□□□□□ -2.95
PRPF40A-207ENST00000471701 DEFB106AQ8N104 65 aa-3.4□□□□□ -2.95
PRPF40A-207ENST00000471701 CLTCQ00610 1675 aaKnown RBP-3.4□□□□□ -2.95
PRPF40A-207ENST00000471701 IQCF6A8MYZ5 107 aa-3.41□□□□□ -2.96
PRPF40A-207ENST00000471701 MT-ATP8P03928 68 aa-3.41□□□□□ -2.96
PRPF40A-207ENST00000471701 LRBAP50851 2863 aa-3.41□□□□□ -2.96
PRPF40A-207ENST00000471701 DEPDC5O75140 1603 aa-3.41□□□□□ -2.96
PRPF40A-207ENST00000471701 NWD1Q149M9 1564 aa-3.42□□□□□ -2.96
PRPF40A-207ENST00000471701 GNG8Q9UK08 70 aa-3.42□□□□□ -2.96
PRPF40A-207ENST00000471701 COL6A5A8TX70 2615 aa-3.43□□□□□ -2.96
PRPF40A-207ENST00000471701 SMR3BP02814 79 aaPredicted RBP-3.43□□□□□ -2.96
PRPF40A-207ENST00000471701 A0A1B0GUT8 65 aa-3.44□□□□□ -2.96
PRPF40A-207ENST00000471701 MAGI3Q5TCQ9 1506 aa-3.44□□□□□ -2.96
PRPF40A-207ENST00000471701 BAZ1AQ9NRL2 1556 aaPredicted RBP-3.45□□□□□ -2.96
PRPF40A-207ENST00000471701 UQCRHLA0A096LP55 91 aa-3.45□□□□□ -2.96
PRPF40A-207ENST00000471701 DEFB130BP0DP73 79 aa-3.45□□□□□ -2.96
PRPF40A-207ENST00000471701 DEFB130AP0DP74 79 aa-3.45□□□□□ -2.96
PRPF40A-207ENST00000471701 ZFYVE16Q7Z3T8 1539 aa-3.45□□□□□ -2.96
PRPF40A-207ENST00000471701 ATP7BP35670 1465 aa-3.46□□□□□ -2.96
PRPF40A-207ENST00000471701 MYO9AB2RTY4 2548 aa-3.46□□□□□ -2.96
PRPF40A-207ENST00000471701 DNAH5Q8TE73 4624 aa-3.47□□□□□ -2.96
PRPF40A-207ENST00000471701 COL5A1-AS1Q5SY13 56 aa-3.47□□□□□ -2.96
PRPF40A-207ENST00000471701 DOT1LQ8TEK3 1739 aa-3.47□□□□□ -2.97
PRPF40A-207ENST00000471701 EYSQ5T1H1 3165 aa-3.48□□□□□ -2.97
PRPF40A-207ENST00000471701 MRPS10P82664 201 aaKnown RBP-3.49□□□□□ -2.97
PRPF40A-207ENST00000471701 LTN1O94822 1766 aa-3.49□□□□□ -2.97
PRPF40A-207ENST00000471701 SMG1Q96Q15 3661 aaKnown RBP-3.5□□□□□ -2.97
PRPF40A-207ENST00000471701 TRAV21A0A0B4J279 112 aa-3.5□□□□□ -2.97
PRPF40A-207ENST00000471701 IAPPP10997 89 aa-3.5□□□□□ -2.97
PRPF40A-207ENST00000471701 LYNX1G3V0Z9 82 aa-3.51□□□□□ -2.97
PRPF40A-207ENST00000471701 FAUP35544 74 aaKnown RBP-3.51□□□□□ -2.97
PRPF40A-207ENST00000471701 PLGLAQ15195 96 aa-3.51□□□□□ -2.97
PRPF40A-207ENST00000471701 WFDC9Q8NEX5 89 aa-3.51□□□□□ -2.97
PRPF40A-207ENST00000471701 ANKRD36CQ5JPF3 1778 aa-3.51□□□□□ -2.97
PRPF40A-207ENST00000471701 ABCA13Q86UQ4 5058 aa-3.52□□□□□ -2.97
PRPF40A-207ENST00000471701 MT1HL1P0DM35 61 aa-3.53□□□□□ -2.97
PRPF40A-207ENST00000471701 C2orf88Q9BSF0 95 aa-3.53□□□□□ -2.97
PRPF40A-207ENST00000471701 EPRSP07814 1512 aaKnown RBP-3.54□□□□□ -2.98
PRPF40A-207ENST00000471701 IFI6P09912 130 aa-3.54□□□□□ -2.98
PRPF40A-207ENST00000471701 CLPSL2Q6UWE3 100 aa-3.54□□□□□ -2.98
PRPF40A-207ENST00000471701 CEP170BQ9Y4F5 1589 aaPredicted RBP-3.55□□□□□ -2.98
PRPF40A-207ENST00000471701 FYCO1Q9BQS8 1478 aa-3.55□□□□□ -2.98
PRPF40A-207ENST00000471701 DNAH10Q8IVF4 4471 aa-3.56□□□□□ -2.98
PRPF40A-207ENST00000471701 EFCAB10A6NFE3 127 aa-3.56□□□□□ -2.98
PRPF40A-207ENST00000471701 MT1EP04732 61 aa-3.56□□□□□ -2.98
PRPF40A-207ENST00000471701 FANCAO15360 1455 aa-3.57□□□□□ -2.98
PRPF40A-207ENST00000471701 CYB5AP00167 134 aa-3.57□□□□□ -2.98
PRPF40A-207ENST00000471701 HMGN2P05204 90 aaKnown RBP-3.57□□□□□ -2.98
PRPF40A-207ENST00000471701 ZNF831Q5JPB2 1677 aa-3.57□□□□□ -2.98
PRPF40A-207ENST00000471701 CFAP46Q8IYW2 2715 aa-3.57□□□□□ -2.98
PRPF40A-207ENST00000471701 LCE6AA0A183 80 aa-3.58□□□□□ -2.98
PRPF40A-207ENST00000471701 C20orf202A1L168 122 aa-3.58□□□□□ -2.98
PRPF40A-207ENST00000471701 LINC00587B1AMM8 73 aa-3.58□□□□□ -2.98
PRPF40A-207ENST00000471701 SPTAN1Q13813 2472 aaKnown RBP-3.58□□□□□ -2.98
PRPF40A-207ENST00000471701 UBR1Q8IWV7 1749 aa-3.58□□□□□ -2.98
PRPF40A-207ENST00000471701 S100A10P60903 97 aa-3.59□□□□□ -2.98
PRPF40A-207ENST00000471701 CDC42BPAQ5VT25 1732 aa-3.6□□□□□ -2.99
PRPF40A-207ENST00000471701 TEX14Q8IWB6 1497 aa-3.6□□□□□ -2.99
PRPF40A-207ENST00000471701 PLIN4Q96Q06 1357 aa-3.61□□□□□ -2.99
PRPF40A-207ENST00000471701 ADGRG4Q8IZF6 3080 aa-3.61□□□□□ -2.99
PRPF40A-207ENST00000471701 NEXMIFQ5QGS0 1516 aa-3.63□□□□□ -2.99
PRPF40A-207ENST00000471701 ATP10BO94823 1461 aa-3.63□□□□□ -2.99
PRPF40A-207ENST00000471701 MYO3AQ8NEV4 1616 aa-3.63□□□□□ -2.99
PRPF40A-207ENST00000471701 ACYP1P07311 99 aa-3.64□□□□□ -2.99
PRPF40A-207ENST00000471701 KRTAP8-1Q8IUC2 63 aa-3.64□□□□□ -2.99
PRPF40A-207ENST00000471701 MGAQ8IWI9 3026 aa-3.65□□□□□ -2.99
PRPF40A-207ENST00000471701 MT1LQ93083 61 aa-3.65□□□□□ -2.99
PRPF40A-207ENST00000471701 DDX60LQ5H9U9 1706 aaKnown RBP-3.65□□□□□ -2.99
PRPF40A-207ENST00000471701 ABCC10Q5T3U5 1492 aa-3.66□□□□□ -2.99
PRPF40A-207ENST00000471701 PARP4Q9UKK3 1724 aaKnown RBP-3.66□□□□□ -3
PRPF40A-207ENST00000471701 TOGARAM1Q9Y4F4 1720 aa-3.66□□□□□ -3
PRPF40A-207ENST00000471701 TNP1P09430 55 aa-3.66□□□□□ -3
PRPF40A-207ENST00000471701 LINC00032P0C843 101 aa-3.68□□□□□ -3
PRPF40A-207ENST00000471701 DIP2BQ9P265 1576 aa-3.68□□□□□ -3
PRPF40A-207ENST00000471701 MMP24-AS1A0A0U1RRL7 71 aa-3.69□□□□□ -3
PRPF40A-207ENST00000471701 NCOA2Q15596 1464 aa-3.7□□□□□ -3
PRPF40A-207ENST00000471701 PEA15Q15121 130 aa-3.7□□□□□ -3
PRPF40A-207ENST00000471701 MT1GP13640 62 aa-3.72□□□□□ -3
PRPF40A-207ENST00000471701 SMIM11AP58511 58 aa-3.72□□□□□ -3
PRPF40A-207ENST00000471701 DPY30Q9C005 99 aa-3.72□□□□□ -3
PRPF40A-207ENST00000471701 TMEM131LA2VDJ0 1609 aa-3.73□□□□□ -3.01
PRPF40A-207ENST00000471701 TIMM8BQ9Y5J9 83 aaPredicted RBP-3.73□□□□□ -3.01
PRPF40A-207ENST00000471701 ARFGEF2Q9Y6D5 1785 aa-3.74□□□□□ -3.01
PRPF40A-207ENST00000471701 NDUFB1O75438 58 aa-3.74□□□□□ -3.01
PRPF40A-207ENST00000471701 ITSN1Q15811 1721 aa-3.75□□□□□ -3.01
PRPF40A-207ENST00000471701 ITSN2Q9NZM3 1697 aa-3.75□□□□□ -3.01
PRPF40A-207ENST00000471701 MYMXA0A1B0GTQ4 84 aa-3.76□□□□□ -3.01
PRPF40A-207ENST00000471701 PLCH1Q4KWH8 1693 aa-3.77□□□□□ -3.01
PRPF40A-207ENST00000471701 IGLV5-48A0A075B6I7 105 aa-3.77□□□□□ -3.01
PRPF40A-207ENST00000471701 C20orf78Q9BR46 151 aa-3.78□□□□□ -3.01
PRPF40A-207ENST00000471701 SARNPP82979 210 aaKnown RBP-3.79□□□□□ -3.02
PRPF40A-207ENST00000471701 DMXL2Q8TDJ6 3036 aa-3.81□□□□□ -3.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms