RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 NDUFA3O95167 84 aa0.64□□□□□ -2.31
SEMA3A-206ENST00000471474 LINC00308Q8TCZ7 52 aa0.64□□□□□ -2.31
SEMA3A-206ENST00000471474 SPTBN1Q01082 2364 aaKnown RBP0.64□□□□□ -2.31
SEMA3A-206ENST00000471474 SRCAPQ6ZRS2 3230 aa0.64□□□□□ -2.31
SEMA3A-206ENST00000471474 SPTA1P02549 2419 aa0.64□□□□□ -2.31
SEMA3A-206ENST00000471474 SPTBN2O15020 2390 aa0.63□□□□□ -2.31
SEMA3A-206ENST00000471474 ACACAQ13085 2346 aa0.63□□□□□ -2.31
SEMA3A-206ENST00000471474 LOC730098B7Z3J9 87 aa0.63□□□□□ -2.31
SEMA3A-206ENST00000471474 ARHGAP5-AS1Q96IT6 56 aa0.63□□□□□ -2.31
SEMA3A-206ENST00000471474 SMIM2Q9BVW6 85 aa0.63□□□□□ -2.31
SEMA3A-206ENST00000471474 RIF1Q5UIP0 2472 aaKnown RBP0.63□□□□□ -2.31
SEMA3A-206ENST00000471474 FAM186AA6NE01 2351 aa0.63□□□□□ -2.31
SEMA3A-206ENST00000471474 C2CD3Q4AC94 2353 aa0.63□□□□□ -2.31
SEMA3A-206ENST00000471474 UBR5O95071 2799 aaPredicted RBP0.62□□□□□ -2.31
SEMA3A-206ENST00000471474 TFF3Q07654 80 aa0.62□□□□□ -2.31
SEMA3A-206ENST00000471474 MINOS1Q5TGZ0 78 aa0.62□□□□□ -2.31
SEMA3A-206ENST00000471474 C6orf48Q9UBA6 75 aa0.62□□□□□ -2.31
SEMA3A-206ENST00000471474 NAV2Q8IVL1 2488 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 CACNA1HO95180 2353 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 VPS13DQ5THJ4 4388 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 WNK1Q9H4A3 2382 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 GOLGB1Q14789 3259 aaKnown RBP0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 NDUFA1O15239 70 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 SPINK4O60575 86 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 SPRR1BP22528 89 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 H1FX-AS1Q4G0G2 97 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 DEFB105AQ8NG35 78 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 NCOR1O75376 2440 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 NBEAQ8NFP9 2946 aa0.61□□□□□ -2.31
SEMA3A-206ENST00000471474 AKAP6Q13023 2319 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 IAPPP10997 89 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 RPS27P42677 84 aaKnown RBP0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 POLR2KP53803 58 aaKnown RBP0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 TTTY10Q9BZA0 68 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 SETD2Q9BYW2 2564 aaPredicted RBP0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 SPTBN4Q9H254 2564 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 APC2O95996 2303 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 PCNX1Q96RV3 2341 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 MAP1BP46821 2468 aaKnown RBP0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 OTOGQ6ZRI0 2925 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 DMDP11532 3685 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 SPTBN5Q9NRC6 3674 aaKnown RBP0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 MEGF8Q7Z7M0 2845 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 CHD7Q9P2D1 2997 aa0.6□□□□□ -2.31
SEMA3A-206ENST00000471474 CREBBPQ92793 2442 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 CSPG4Q6UVK1 2322 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 DNAH11Q96DT5 4516 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 REV3LO60673 3130 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 PCNTO95613 3336 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 DEFB130BP0DP73 79 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 DEFB130AP0DP74 79 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 WFDC13Q8IUB5 93 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 DEFB106AQ8N104 65 aa0.59□□□□□ -2.31
SEMA3A-206ENST00000471474 KMT2DO14686 5537 aa0.59□□□□□ -2.32
SEMA3A-206ENST00000471474 PKDREJQ9NTG1 2253 aa0.59□□□□□ -2.32
SEMA3A-206ENST00000471474 CEP350Q5VT06 3117 aa0.59□□□□□ -2.32
SEMA3A-206ENST00000471474 WDR87Q6ZQQ6 2873 aa0.59□□□□□ -2.32
SEMA3A-206ENST00000471474 UTRNP46939 3433 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 AKAP9Q99996 3911 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 CENPFP49454 3210 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 IGLV5-48A0A075B6I7 105 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 H3BUA1 57 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 PRCDQ00LT1 54 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 KLK9Q2XQG4 91 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 LELP1Q5T871 98 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 APLNQ9ULZ1 77 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 HTTP42858 3142 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 USP34Q70CQ2 3546 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 ASH1LQ9NR48 2969 aaKnown RBP0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 COL6A3P12111 3177 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 BSNQ9UPA5 3926 aa0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 DSPP15924 2871 aaKnown RBP0.58□□□□□ -2.32
SEMA3A-206ENST00000471474 ITPR1Q14643 2758 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 HUWE1Q7Z6Z7 4374 aaKnown RBP0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 ABCA2Q9BZC7 2435 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 DNAH1Q9P2D7 4330 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 TTC28Q96AY4 2481 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 XIRP2A4UGR9 3374 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 NBPF19A0A087WUL8 3843 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 TNRC18O15417 2968 aaPredicted RBP0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 WT1-ASQ06250 92 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 TIMM8BQ9Y5J9 83 aaPredicted RBP0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 TENM2Q9NT68 2774 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 EPG5Q9HCE0 2579 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 VWFP04275 2813 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 EP300Q09472 2414 aaPredicted RBP0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 DNAH2Q9P225 4427 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 CEP290O15078 2479 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 VPS13AQ96RL7 3174 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 CHD6Q8TD26 2715 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 NCOR2Q9Y618 2525 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 RANBP2P49792 3224 aaKnown RBP0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 ASPMQ8IZT6 3477 aa0.57□□□□□ -2.32
SEMA3A-206ENST00000471474 DNAH6Q9C0G6 4158 aa0.56□□□□□ -2.32
SEMA3A-206ENST00000471474 MAP1AP78559 2803 aaPredicted RBP0.56□□□□□ -2.32
SEMA3A-206ENST00000471474 CFAP54Q96N23 3096 aa0.56□□□□□ -2.32
SEMA3A-206ENST00000471474 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
SEMA3A-206ENST00000471474 BDP1A6H8Y1 2624 aa0.56□□□□□ -2.32
SEMA3A-206ENST00000471474 LRBAP50851 2863 aa0.56□□□□□ -2.32
SEMA3A-206ENST00000471474 SPG11Q96JI7 2443 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms