RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 COL6A5A8TX70 2615 aa0.01□□□□□ -2.41
SMC5-202ENST00000471372 ANKARQ7Z5J8 1434 aa0.01□□□□□ -2.41
SMC5-202ENST00000471372 SCN11AQ9UI33 1791 aa0.01□□□□□ -2.41
SMC5-202ENST00000471372 HECTD1Q9ULT8 2610 aa0□□□□□ -2.41
SMC5-202ENST00000471372 HIVEP1P15822 2718 aa0□□□□□ -2.41
SMC5-202ENST00000471372 MXRA5Q9NR99 2828 aa0□□□□□ -2.41
SMC5-202ENST00000471372 DNAH3Q8TD57 4116 aa0□□□□□ -2.41
SMC5-202ENST00000471372 TEX15Q9BXT5 2789 aa0□□□□□ -2.41
SMC5-202ENST00000471372 DNAH9Q9NYC9 4486 aa-0.01□□□□□ -2.41
SMC5-202ENST00000471372 MUC12Q9UKN1 5478 aa-0.01□□□□□ -2.41
SMC5-202ENST00000471372 LRP1BQ9NZR2 4599 aa-0.01□□□□□ -2.41
SMC5-202ENST00000471372 PDZD2O15018 2839 aa-0.01□□□□□ -2.41
SMC5-202ENST00000471372 MUC2Q02817 5179 aa-0.01□□□□□ -2.41
SMC5-202ENST00000471372 ZZEF1O43149 2961 aa-0.01□□□□□ -2.41
SMC5-202ENST00000471372 CFAP43Q8NDM7 1665 aa-0.02□□□□□ -2.41
SMC5-202ENST00000471372 SPTAN1Q13813 2472 aaKnown RBP-0.02□□□□□ -2.41
SMC5-202ENST00000471372 PKHD1P08F94 4074 aa-0.02□□□□□ -2.41
SMC5-202ENST00000471372 COL6A3P12111 3177 aa-0.02□□□□□ -2.41
SMC5-202ENST00000471372 ABCA8O94911 1581 aa-0.02□□□□□ -2.41
SMC5-202ENST00000471372 DSPP15924 2871 aaKnown RBP-0.02□□□□□ -2.41
SMC5-202ENST00000471372 PRRC2CQ9Y520 2896 aaKnown RBP-0.02□□□□□ -2.41
SMC5-202ENST00000471372 MYO9AB2RTY4 2548 aa-0.02□□□□□ -2.41
SMC5-202ENST00000471372 KMT2CQ8NEZ4 4911 aaKnown RBP-0.02□□□□□ -2.41
SMC5-202ENST00000471372 PTPN23Q9H3S7 1636 aa-0.02□□□□□ -2.41
SMC5-202ENST00000471372 TEP1Q99973 2627 aaKnown RBP-0.02□□□□□ -2.41
SMC5-202ENST00000471372 VPS13DQ5THJ4 4388 aa-0.03□□□□□ -2.41
SMC5-202ENST00000471372 UTP20O75691 2785 aaKnown RBP-0.03□□□□□ -2.41
SMC5-202ENST00000471372 FLGP20930 4061 aaPredicted RBP-0.03□□□□□ -2.41
SMC5-202ENST00000471372 HYDINQ4G0P3 5121 aa-0.03□□□□□ -2.41
SMC5-202ENST00000471372 SPRR2BP35325 72 aa-0.03□□□□□ -2.41
SMC5-202ENST00000471372 PRO3102Q9H379 93 aa-0.03□□□□□ -2.41
SMC5-202ENST00000471372 MGAM2Q2M2H8 2515 aa-0.03□□□□□ -2.41
SMC5-202ENST00000471372 TLN2Q9Y4G6 2542 aa-0.03□□□□□ -2.41
SMC5-202ENST00000471372 TACC2O95359 2948 aa-0.03□□□□□ -2.41
SMC5-202ENST00000471372 CICQ96RK0 1608 aaPredicted RBP-0.03□□□□□ -2.41
SMC5-202ENST00000471372 CEP295Q9C0D2 2601 aa-0.03□□□□□ -2.41
SMC5-202ENST00000471372 MTORP42345 2549 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 DNAH6Q9C0G6 4158 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 PLCH1Q4KWH8 1693 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 GCN1Q92616 2671 aaKnown RBP-0.04□□□□□ -2.42
SMC5-202ENST00000471372 PKHD1L1Q86WI1 4243 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 HERC2O95714 4834 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 NBEAL2Q6ZNJ1 2754 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 MAP3K1Q13233 1512 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 AKAP9Q99996 3911 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 STARD9Q9P2P6 4700 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 CD163L1Q9NR16 1453 aa-0.04□□□□□ -2.42
SMC5-202ENST00000471372 DNAH11Q96DT5 4516 aa-0.05□□□□□ -2.42
SMC5-202ENST00000471372 RICTORQ6R327 1708 aa-0.05□□□□□ -2.42
SMC5-202ENST00000471372 UBR4Q5T4S7 5183 aa-0.05□□□□□ -2.42
SMC5-202ENST00000471372 TNRC18O15417 2968 aaPredicted RBP-0.06□□□□□ -2.42
SMC5-202ENST00000471372 PKD1P98161 4303 aa-0.06□□□□□ -2.42
SMC5-202ENST00000471372 C3orf79P0CE67 100 aa-0.06□□□□□ -2.42
SMC5-202ENST00000471372 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
SMC5-202ENST00000471372 DNAH2Q9P225 4427 aa-0.06□□□□□ -2.42
SMC5-202ENST00000471372 TRANK1O15050 2925 aa-0.06□□□□□ -2.42
SMC5-202ENST00000471372 MUC17Q685J3 4493 aa-0.07□□□□□ -2.42
SMC5-202ENST00000471372 NBEAQ8NFP9 2946 aa-0.07□□□□□ -2.42
SMC5-202ENST00000471372 LINC00158P58513 81 aa-0.07□□□□□ -2.42
SMC5-202ENST00000471372 CUBNO60494 3623 aa-0.07□□□□□ -2.42
SMC5-202ENST00000471372 ANKRD11Q6UB99 2663 aaPredicted RBP-0.07□□□□□ -2.42
SMC5-202ENST00000471372 LYSTQ99698 3801 aa-0.07□□□□□ -2.42
SMC5-202ENST00000471372 CFAP46Q8IYW2 2715 aa-0.07□□□□□ -2.42
SMC5-202ENST00000471372 LAMA5O15230 3695 aa-0.08□□□□□ -2.42
SMC5-202ENST00000471372 RYR3Q15413 4870 aa-0.08□□□□□ -2.42
SMC5-202ENST00000471372 SVEP1Q4LDE5 3571 aa-0.08□□□□□ -2.42
SMC5-202ENST00000471372 PLECQ15149 4684 aaKnown RBP-0.08□□□□□ -2.42
SMC5-202ENST00000471372 LRBAP50851 2863 aa-0.08□□□□□ -2.42
SMC5-202ENST00000471372 EPPK1P58107 5090 aaKnown RBP-0.08□□□□□ -2.42
SMC5-202ENST00000471372 NIPBLQ6KC79 2804 aaeCLIP-0.08□□□□□ -2.42
SMC5-202ENST00000471372 ANK3Q12955 4377 aaKnown RBP-0.08□□□□□ -2.42
SMC5-202ENST00000471372 ACACBO00763 2458 aa-0.08□□□□□ -2.42
SMC5-202ENST00000471372 DNAH1Q9P2D7 4330 aa-0.08□□□□□ -2.42
SMC5-202ENST00000471372 ADAMTS12P58397 1594 aa-0.09□□□□□ -2.42
SMC5-202ENST00000471372 DEFA5Q01523 94 aa-0.09□□□□□ -2.42
SMC5-202ENST00000471372 DSTQ03001 7570 aaKnown RBP-0.09□□□□□ -2.42
SMC5-202ENST00000471372 WDR87Q6ZQQ6 2873 aa-0.09□□□□□ -2.42
SMC5-202ENST00000471372 DNAH8Q96JB1 4490 aa-0.09□□□□□ -2.42
SMC5-202ENST00000471372 USH2AO75445 5202 aa-0.1□□□□□ -2.42
SMC5-202ENST00000471372 RYR1P21817 5038 aa-0.1□□□□□ -2.42
SMC5-202ENST00000471372 FAT3Q8TDW7 4589 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 VPS13BQ7Z7G8 4022 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 SACSQ9NZJ4 4579 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 KIAA1109Q2LD37 5005 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 CMYA5Q8N3K9 4069 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 DYNC1H1Q14204 4646 aaKnown RBP-0.11□□□□□ -2.43
SMC5-202ENST00000471372 LRRIQ1Q96JM4 1722 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 RELNP78509 3460 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 ITPR1Q14643 2758 aa-0.11□□□□□ -2.43
SMC5-202ENST00000471372 TLN1Q9Y490 2541 aaKnown RBP-0.12□□□□□ -2.43
SMC5-202ENST00000471372 ANKRD50Q9ULJ7 1429 aa-0.12□□□□□ -2.43
SMC5-202ENST00000471372 DNAH7Q8WXX0 4024 aa-0.12□□□□□ -2.43
SMC5-202ENST00000471372 RYR2Q92736 4967 aa-0.12□□□□□ -2.43
SMC5-202ENST00000471372 DDX60LQ5H9U9 1706 aaKnown RBP-0.12□□□□□ -2.43
SMC5-202ENST00000471372 DNHD1Q96M86 4753 aa-0.12□□□□□ -2.43
SMC5-202ENST00000471372 BIRC6Q9NR09 4857 aa-0.12□□□□□ -2.43
SMC5-202ENST00000471372 C5orf42Q9H799 3197 aa-0.12□□□□□ -2.43
SMC5-202ENST00000471372 DMXL1Q9Y485 3027 aa-0.13□□□□□ -2.43
SMC5-202ENST00000471372 A0A0C4DFX4 3053 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms