RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TCL1BO95988 128 aa5.39□□□□□ -1.55
SF3A1-206ENST00000471037 TRACP01848 142 aa5.39□□□□□ -1.55
SF3A1-206ENST00000471037 PRR4Q16378 134 aa5.39□□□□□ -1.55
SF3A1-206ENST00000471037 Q9BRP9 147 aa5.39□□□□□ -1.55
SF3A1-206ENST00000471037 HIGD2AQ9BW72 106 aa5.39□□□□□ -1.55
SF3A1-206ENST00000471037 SPCS1Q9Y6A9 102 aa5.39□□□□□ -1.55
SF3A1-206ENST00000471037 DNAL4O96015 105 aa5.38□□□□□ -1.55
SF3A1-206ENST00000471037 SMCR5Q8TEV8 140 aa5.38□□□□□ -1.55
SF3A1-206ENST00000471037 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
SF3A1-206ENST00000471037 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.37□□□□□ -1.55
SF3A1-206ENST00000471037 GTF2H5Q6ZYL4 71 aa5.37□□□□□ -1.55
SF3A1-206ENST00000471037 K7EP34 96 aa5.36□□□□□ -1.55
SF3A1-206ENST00000471037 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
SF3A1-206ENST00000471037 OCIAD2Q56VL3 154 aa5.36□□□□□ -1.55
SF3A1-206ENST00000471037 H3BQ85 93 aa5.35□□□□□ -1.55
SF3A1-206ENST00000471037 Q6ZQY7 126 aa5.35□□□□□ -1.55
SF3A1-206ENST00000471037 ZNF706Q9Y5V0 76 aaPredicted RBP5.35□□□□□ -1.55
SF3A1-206ENST00000471037 H3BMG7 143 aa5.34□□□□□ -1.55
SF3A1-206ENST00000471037 PPDPFLQ8WWR9 84 aa5.34□□□□□ -1.55
SF3A1-206ENST00000471037 ORMDL1Q9P0S3 153 aa5.34□□□□□ -1.55
SF3A1-206ENST00000471037 IGLV5-48A0A075B6I7 105 aa5.33□□□□□ -1.56
SF3A1-206ENST00000471037 A0A1B0GV90 55 aa5.33□□□□□ -1.56
SF3A1-206ENST00000471037 C9JAW5 83 aa5.33□□□□□ -1.56
SF3A1-206ENST00000471037 TEX49A0A1B0GTD5 131 aa5.32□□□□□ -1.56
SF3A1-206ENST00000471037 ST20-AS1Q8NBB2 130 aa5.32□□□□□ -1.56
SF3A1-206ENST00000471037 SPRR4Q96PI1 79 aa5.32□□□□□ -1.56
SF3A1-206ENST00000471037 A0A087X002 238 aa5.31□□□□□ -1.56
SF3A1-206ENST00000471037 H3BT86 120 aa5.31□□□□□ -1.56
SF3A1-206ENST00000471037 TMEM256-PLSCR3K7ERE1 68 aa5.31□□□□□ -1.56
SF3A1-206ENST00000471037 SPRR1BP22528 89 aa5.31□□□□□ -1.56
SF3A1-206ENST00000471037 LINC01547P58512 204 aaPredicted RBP5.31□□□□□ -1.56
SF3A1-206ENST00000471037 LINC00483Q53H64 154 aa5.31□□□□□ -1.56
SF3A1-206ENST00000471037 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
SF3A1-206ENST00000471037 BAALC-AS2P0C853 105 aa5.3□□□□□ -1.56
SF3A1-206ENST00000471037 UBE2V1Q13404 147 aa5.3□□□□□ -1.56
SF3A1-206ENST00000471037 GAGE2AQ6NT46 116 aa5.3□□□□□ -1.56
SF3A1-206ENST00000471037 Q8N377 158 aa5.3□□□□□ -1.56
SF3A1-206ENST00000471037 DEFB105AQ8NG35 78 aa5.3□□□□□ -1.56
SF3A1-206ENST00000471037 CRYGAP11844 174 aa5.29□□□□□ -1.56
SF3A1-206ENST00000471037 F8W1H4 67 aa5.28□□□□□ -1.56
SF3A1-206ENST00000471037 FAM229BQ4G0N7 80 aa5.28□□□□□ -1.56
SF3A1-206ENST00000471037 MTURNQ8N3F0 131 aa5.28□□□□□ -1.56
SF3A1-206ENST00000471037 ANKRD29Q8N6D5 301 aa5.28□□□□□ -1.56
SF3A1-206ENST00000471037 TYMSOSQ8TAI1 123 aa5.28□□□□□ -1.56
SF3A1-206ENST00000471037 PRO0461Q9UI25 63 aa5.28□□□□□ -1.56
SF3A1-206ENST00000471037 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
SF3A1-206ENST00000471037 LAMTOR3Q9UHA4 124 aa5.27□□□□□ -1.57
SF3A1-206ENST00000471037 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
SF3A1-206ENST00000471037 F8WEM9 126 aa5.26□□□□□ -1.57
SF3A1-206ENST00000471037 NDUFV3P56181 108 aaKnown RBP5.26□□□□□ -1.57
SF3A1-206ENST00000471037 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
SF3A1-206ENST00000471037 SMIM29Q86T20 159 aa5.26□□□□□ -1.57
SF3A1-206ENST00000471037 JMJD7-PLA2G4BH0Y9G9 81 aa5.25□□□□□ -1.57
SF3A1-206ENST00000471037 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
SF3A1-206ENST00000471037 ANAPC11Q9NYG5 84 aa5.25□□□□□ -1.57
SF3A1-206ENST00000471037 C3orf22Q8N5N4 141 aa5.24□□□□□ -1.57
SF3A1-206ENST00000471037 IGLV8-61A0A075B6I0 122 aa5.23□□□□□ -1.57
SF3A1-206ENST00000471037 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
SF3A1-206ENST00000471037 Q8NBF4 154 aa5.23□□□□□ -1.57
SF3A1-206ENST00000471037 RETNLBQ9BQ08 111 aa5.23□□□□□ -1.57
SF3A1-206ENST00000471037 IGLV9-49A0A0B4J1Y8 123 aa5.22□□□□□ -1.57
SF3A1-206ENST00000471037 RBM3P98179 157 aaKnown RBP5.22□□□□□ -1.57
SF3A1-206ENST00000471037 C9orf153Q5TBE3 101 aa5.22□□□□□ -1.57
SF3A1-206ENST00000471037 TEN1Q86WV5 123 aa5.22□□□□□ -1.57
SF3A1-206ENST00000471037 OBSCN-AS1Q96MR7 158 aa5.22□□□□□ -1.57
SF3A1-206ENST00000471037 CDIP1Q9H305 208 aa5.22□□□□□ -1.57
SF3A1-206ENST00000471037 MOBPQ13875 183 aa5.21□□□□□ -1.58
SF3A1-206ENST00000471037 Q6JHZ5 121 aa5.21□□□□□ -1.58
SF3A1-206ENST00000471037 SSBP3-AS1Q7Z2R9 100 aa5.21□□□□□ -1.58
SF3A1-206ENST00000471037 IGLV7-46A0A075B6I9 117 aa5.2□□□□□ -1.58
SF3A1-206ENST00000471037 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
SF3A1-206ENST00000471037 ETDBQ3ZM63 59 aa5.2□□□□□ -1.58
SF3A1-206ENST00000471037 DSCR8Q96T75 97 aa5.2□□□□□ -1.58
SF3A1-206ENST00000471037 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
SF3A1-206ENST00000471037 A0A1B0GV72 72 aa5.19□□□□□ -1.58
SF3A1-206ENST00000471037 PDE6GP18545 87 aa5.19□□□□□ -1.58
SF3A1-206ENST00000471037 LOC110117498A0A087WWA1 95 aa5.18□□□□□ -1.58
SF3A1-206ENST00000471037 IGFL1Q6UW32 110 aa5.18□□□□□ -1.58
SF3A1-206ENST00000471037 C14orf132Q9NPU4 83 aa5.18□□□□□ -1.58
SF3A1-206ENST00000471037 CD164Q04900 197 aa5.16□□□□□ -1.58
SF3A1-206ENST00000471037 Q6ZQT0 140 aa5.16□□□□□ -1.58
SF3A1-206ENST00000471037 CCKP06307 115 aa5.15□□□□□ -1.59
SF3A1-206ENST00000471037 Q6Q795 121 aa5.15□□□□□ -1.59
SF3A1-206ENST00000471037 FP248Q71RG6 208 aaPredicted RBP5.15□□□□□ -1.59
SF3A1-206ENST00000471037 A0A1B0GW54 56 aa5.14□□□□□ -1.59
SF3A1-206ENST00000471037 SPAG11AQ6PDA7 123 aa5.14□□□□□ -1.59
SF3A1-206ENST00000471037 A0A0G2JQZ4 141 aa5.13□□□□□ -1.59
SF3A1-206ENST00000471037 A0A1W2PNM2 257 aa5.13□□□□□ -1.59
SF3A1-206ENST00000471037 TRBV7-7A0A0K0K1E9 115 aa5.12□□□□□ -1.59
SF3A1-206ENST00000471037 SPINK1P00995 79 aa5.12□□□□□ -1.59
SF3A1-206ENST00000471037 KRTAP13-3Q3SY46 172 aa5.12□□□□□ -1.59
SF3A1-206ENST00000471037 ASB16-AS1Q495Z4 193 aa5.12□□□□□ -1.59
SF3A1-206ENST00000471037 VPS25Q9BRG1 176 aa5.12□□□□□ -1.59
SF3A1-206ENST00000471037 J3QR89 54 aa5.11□□□□□ -1.59
SF3A1-206ENST00000471037 RPS29P62273 56 aaKnown RBP5.11□□□□□ -1.59
SF3A1-206ENST00000471037 HRCT1Q6UXD1 115 aa5.1□□□□□ -1.59
SF3A1-206ENST00000471037 LIMD2Q9BT23 127 aa5.1□□□□□ -1.59
SF3A1-206ENST00000471037 A0A087WSZ3 146 aa5.09□□□□□ -1.59
SF3A1-206ENST00000471037 FAM240AA0A1B0GVK7 77 aa5.09□□□□□ -1.59
SF3A1-206ENST00000471037 Q5XG85 94 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms