RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 DNAH2Q9P225 4427 aa10.51□□□□□ -0.73
SMARCD3-206ENST00000470588 SPRR1BP22528 89 aa10.49□□□□□ -0.73
SMARCD3-206ENST00000470588 Q8NBF4 154 aa10.49□□□□□ -0.73
SMARCD3-206ENST00000470588 IGLV8-61A0A075B6I0 122 aa10.49□□□□□ -0.73
SMARCD3-206ENST00000470588 CCDC179H3BU77 68 aa10.49□□□□□ -0.73
SMARCD3-206ENST00000470588 SPRR4Q96PI1 79 aa10.48□□□□□ -0.73
SMARCD3-206ENST00000470588 KRTAP13-1Q8IUC0 172 aa10.47□□□□□ -0.73
SMARCD3-206ENST00000470588 PLAC8Q9NZF1 115 aa10.47□□□□□ -0.73
SMARCD3-206ENST00000470588 DNAH17Q9UFH2 4485 aa10.45□□□□□ -0.74
SMARCD3-206ENST00000470588 UQCRQO14949 82 aa10.43□□□□□ -0.74
SMARCD3-206ENST00000470588 COX7CP15954 63 aa10.43□□□□□ -0.74
SMARCD3-206ENST00000470588 CRYGAP11844 174 aa10.42□□□□□ -0.74
SMARCD3-206ENST00000470588 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
SMARCD3-206ENST00000470588 BPY2O14599 106 aa10.41□□□□□ -0.74
SMARCD3-206ENST00000470588 SCXQ7RTU7 201 aa10.41□□□□□ -0.74
SMARCD3-206ENST00000470588 KRTAP10-2P60368 255 aa10.4□□□□□ -0.74
SMARCD3-206ENST00000470588 LINC00336Q6ZUF6 198 aa10.4□□□□□ -0.74
SMARCD3-206ENST00000470588 SERP2Q8N6R1 65 aa10.4□□□□□ -0.74
SMARCD3-206ENST00000470588 HECTD4Q9Y4D8 3996 aa10.4□□□□□ -0.74
SMARCD3-206ENST00000470588 FRAS1Q86XX4 4008 aa10.39□□□□□ -0.75
SMARCD3-206ENST00000470588 PSORS1C2Q9UIG4 136 aa10.37□□□□□ -0.75
SMARCD3-206ENST00000470588 IGKV4-1P06312 121 aa10.34□□□□□ -0.75
SMARCD3-206ENST00000470588 C9orf153Q5TBE3 101 aa10.34□□□□□ -0.75
SMARCD3-206ENST00000470588 SMIM20Q8N5G0 67 aa10.34□□□□□ -0.75
SMARCD3-206ENST00000470588 HYDINQ4G0P3 5121 aa10.34□□□□□ -0.75
SMARCD3-206ENST00000470588 A0A0G2JQZ4 141 aa10.34□□□□□ -0.75
SMARCD3-206ENST00000470588 ZNF706Q9Y5V0 76 aaPredicted RBP10.33□□□□□ -0.76
SMARCD3-206ENST00000470588 SACSQ9NZJ4 4579 aa10.32□□□□□ -0.76
SMARCD3-206ENST00000470588 LINC00483Q53H64 154 aa10.31□□□□□ -0.76
SMARCD3-206ENST00000470588 ZNF861PO60384 105 aa10.31□□□□□ -0.76
SMARCD3-206ENST00000470588 TRAV7A0A075B6U4 112 aa10.3□□□□□ -0.76
SMARCD3-206ENST00000470588 Q8N9L7 120 aa10.29□□□□□ -0.76
SMARCD3-206ENST00000470588 DNAH11Q96DT5 4516 aa10.28□□□□□ -0.76
SMARCD3-206ENST00000470588 KRTAP10-1P60331 282 aa10.28□□□□□ -0.76
SMARCD3-206ENST00000470588 A0A087WSZ3 146 aa10.27□□□□□ -0.77
SMARCD3-206ENST00000470588 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.77
SMARCD3-206ENST00000470588 Q6ZSA8 131 aa10.26□□□□□ -0.77
SMARCD3-206ENST00000470588 DSCR10P59022 87 aa10.26□□□□□ -0.77
SMARCD3-206ENST00000470588 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
SMARCD3-206ENST00000470588 FAM30AQ9NZY2 134 aa10.26□□□□□ -0.77
SMARCD3-206ENST00000470588 FAT2Q9NYQ8 4349 aa10.25□□□□□ -0.77
SMARCD3-206ENST00000470588 IGLV7-43P04211 117 aa10.24□□□□□ -0.77
SMARCD3-206ENST00000470588 DNAH5Q8TE73 4624 aa10.23□□□□□ -0.77
SMARCD3-206ENST00000470588 PKD1P98161 4303 aa10.22□□□□□ -0.77
SMARCD3-206ENST00000470588 IGLV9-49A0A0B4J1Y8 123 aa10.21□□□□□ -0.78
SMARCD3-206ENST00000470588 SS18L2Q9UHA2 77 aa10.2□□□□□ -0.78
SMARCD3-206ENST00000470588 DNAH8Q96JB1 4490 aa10.18□□□□□ -0.78
SMARCD3-206ENST00000470588 A0A1B0GVY2 172 aa10.18□□□□□ -0.78
SMARCD3-206ENST00000470588 K7EQZ3 153 aa10.18□□□□□ -0.78
SMARCD3-206ENST00000470588 LINC00472Q9H8W2 130 aa10.16□□□□□ -0.78
SMARCD3-206ENST00000470588 SRRM2Q9UQ35 2752 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-206ENST00000470588 DEFB116Q30KQ4 102 aa10.16□□□□□ -0.78
SMARCD3-206ENST00000470588 C20orf197Q8N268 126 aa10.15□□□□□ -0.78
SMARCD3-206ENST00000470588 RYR2Q92736 4967 aa10.15□□□□□ -0.78
SMARCD3-206ENST00000470588 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
SMARCD3-206ENST00000470588 J3KT08 172 aa10.13□□□□□ -0.79
SMARCD3-206ENST00000470588 MOBPQ13875 183 aa10.13□□□□□ -0.79
SMARCD3-206ENST00000470588 ANAPC11Q9NYG5 84 aa10.13□□□□□ -0.79
SMARCD3-206ENST00000470588 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
SMARCD3-206ENST00000470588 HCG22E2RYF7 251 aa10.11□□□□□ -0.79
SMARCD3-206ENST00000470588 A8MWP4 228 aa10.09□□□□□ -0.79
SMARCD3-206ENST00000470588 KLKP1Q107X0 134 aa10.09□□□□□ -0.79
SMARCD3-206ENST00000470588 TMEM258P61165 79 aa10.09□□□□□ -0.79
SMARCD3-206ENST00000470588 PRR15Q8IV56 129 aa10.09□□□□□ -0.79
SMARCD3-206ENST00000470588 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
SMARCD3-206ENST00000470588 SSBP3-AS1Q7Z2R9 100 aa10.06□□□□□ -0.8
SMARCD3-206ENST00000470588 KMT2CQ8NEZ4 4911 aaKnown RBP10.05□□□□□ -0.8
SMARCD3-206ENST00000470588 NDUFB1O75438 58 aa10.03□□□□□ -0.8
SMARCD3-206ENST00000470588 TMEM254Q8TBM7 123 aa10.03□□□□□ -0.8
SMARCD3-206ENST00000470588 Q96NJ1 140 aa10.03□□□□□ -0.8
SMARCD3-206ENST00000470588 CD164Q04900 197 aa10.03□□□□□ -0.8
SMARCD3-206ENST00000470588 SNURFQ9Y675 71 aa10.03□□□□□ -0.8
SMARCD3-206ENST00000470588 KRTAP29-1A8MX34 341 aaPredicted RBP10.02□□□□□ -0.81
SMARCD3-206ENST00000470588 NDUFC1O43677 76 aa10.02□□□□□ -0.81
SMARCD3-206ENST00000470588 WFDC13Q8IUB5 93 aa10.01□□□□□ -0.81
SMARCD3-206ENST00000470588 H7BZZ5 65 aa10□□□□□ -0.81
SMARCD3-206ENST00000470588 A0A0U1RQV1 116 aa9.99□□□□□ -0.81
SMARCD3-206ENST00000470588 FAM229BQ4G0N7 80 aa9.99□□□□□ -0.81
SMARCD3-206ENST00000470588 CASC2Q6XLA1 102 aa9.99□□□□□ -0.81
SMARCD3-206ENST00000470588 C5orf47Q569G3 176 aa9.97□□□□□ -0.81
SMARCD3-206ENST00000470588 DYNC1H1Q14204 4646 aaKnown RBP9.97□□□□□ -0.81
SMARCD3-206ENST00000470588 LRP1BQ9NZR2 4599 aa9.97□□□□□ -0.81
SMARCD3-206ENST00000470588 PKHD1P08F94 4074 aa9.96□□□□□ -0.82
SMARCD3-206ENST00000470588 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
SMARCD3-206ENST00000470588 RPS28P62857 69 aaKnown RBP9.94□□□□□ -0.82
SMARCD3-206ENST00000470588 MMP24-AS1A0A0U1RRL7 71 aa9.93□□□□□ -0.82
SMARCD3-206ENST00000470588 SMR3BP02814 79 aaPredicted RBP9.93□□□□□ -0.82
SMARCD3-206ENST00000470588 A0A1B0GVX0 72 aa9.91□□□□□ -0.82
SMARCD3-206ENST00000470588 ASB16-AS1Q495Z4 193 aa9.91□□□□□ -0.82
SMARCD3-206ENST00000470588 KRTAP13-2Q52LG2 175 aa9.91□□□□□ -0.82
SMARCD3-206ENST00000470588 A0A087X002 238 aa9.91□□□□□ -0.82
SMARCD3-206ENST00000470588 FAM236DA0A1B0GTK5 79 aa9.91□□□□□ -0.82
SMARCD3-206ENST00000470588 FAM236CP0DP71 79 aa9.91□□□□□ -0.82
SMARCD3-206ENST00000470588 SPINK6Q6UWN8 80 aa9.91□□□□□ -0.82
SMARCD3-206ENST00000470588 hDV103S1A0JD37 113 aa9.9□□□□□ -0.82
SMARCD3-206ENST00000470588 C8orf17Q9NRJ1 99 aa9.9□□□□□ -0.82
SMARCD3-206ENST00000470588 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
SMARCD3-206ENST00000470588 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
SMARCD3-206ENST00000470588 Q5XG85 94 aa9.86□□□□□ -0.83
SMARCD3-206ENST00000470588 IGHV6-1A0A0B4J1U7 121 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms