RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 C6orf99Q4VX62 202 aa4.58□□□□□ -1.68
XRN1-208ENST00000470537 Q75L30 129 aa4.58□□□□□ -1.68
XRN1-208ENST00000470537 PCP2Q8IVA1 136 aa4.58□□□□□ -1.68
XRN1-208ENST00000470537 HSPB8Q9UJY1 196 aa4.58□□□□□ -1.68
XRN1-208ENST00000470537 USH2AO75445 5202 aa4.58□□□□□ -1.68
XRN1-208ENST00000470537 A0A0J9YXY3 114 aa4.57□□□□□ -1.68
XRN1-208ENST00000470537 A4D1N5 150 aa4.57□□□□□ -1.68
XRN1-208ENST00000470537 IGKCP01834 107 aa4.57□□□□□ -1.68
XRN1-208ENST00000470537 ADAMTSL4-AS1Q5T5F5 129 aa4.57□□□□□ -1.68
XRN1-208ENST00000470537 SOSTDC1Q6X4U4 206 aa4.57□□□□□ -1.68
XRN1-208ENST00000470537 NHP2Q9NX24 153 aaKnown RBP4.57□□□□□ -1.68
XRN1-208ENST00000470537 IGLV5-48A0A075B6I7 105 aa4.56□□□□□ -1.68
XRN1-208ENST00000470537 A0A1B0GWB2 263 aa4.56□□□□□ -1.68
XRN1-208ENST00000470537 F8WEM9 126 aa4.56□□□□□ -1.68
XRN1-208ENST00000470537 PET117Q6UWS5 81 aa4.56□□□□□ -1.68
XRN1-208ENST00000470537 LINC00308Q8TCZ7 52 aa4.56□□□□□ -1.68
XRN1-208ENST00000470537 COPS9Q8WXC6 57 aa4.56□□□□□ -1.68
XRN1-208ENST00000470537 ZNF815PA8K554 130 aa4.55□□□□□ -1.68
XRN1-208ENST00000470537 TIMM17BO60830 172 aa4.55□□□□□ -1.68
XRN1-208ENST00000470537 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
XRN1-208ENST00000470537 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
XRN1-208ENST00000470537 E9PLD3 99 aa4.54□□□□□ -1.68
XRN1-208ENST00000470537 NDUFA5Q16718 116 aa4.54□□□□□ -1.68
XRN1-208ENST00000470537 OBSCN-AS1Q96MR7 158 aa4.54□□□□□ -1.68
XRN1-208ENST00000470537 SNAPINO95295 136 aa4.53□□□□□ -1.68
XRN1-208ENST00000470537 Q6JHZ5 121 aa4.53□□□□□ -1.68
XRN1-208ENST00000470537 SVBPQ8N300 66 aa4.52□□□□□ -1.69
XRN1-208ENST00000470537 FABP4P15090 132 aa4.51□□□□□ -1.69
XRN1-208ENST00000470537 A0A0G2JQZ4 141 aa4.5□□□□□ -1.69
XRN1-208ENST00000470537 A6NDN8 102 aa4.5□□□□□ -1.69
XRN1-208ENST00000470537 APOC3P02656 99 aa4.5□□□□□ -1.69
XRN1-208ENST00000470537 VAMP3Q15836 100 aa4.5□□□□□ -1.69
XRN1-208ENST00000470537 Q96NJ1 140 aa4.5□□□□□ -1.69
XRN1-208ENST00000470537 PMCHL2Q9BQD1 86 aa4.5□□□□□ -1.69
XRN1-208ENST00000470537 TRAV13-2A0A0B4J235 113 aa4.49□□□□□ -1.69
XRN1-208ENST00000470537 TRBV7-7A0A0K0K1E9 115 aa4.49□□□□□ -1.69
XRN1-208ENST00000470537 FAM236DA0A1B0GTK5 79 aa4.49□□□□□ -1.69
XRN1-208ENST00000470537 FAM236CP0DP71 79 aa4.49□□□□□ -1.69
XRN1-208ENST00000470537 CLEC2BQ92478 149 aa4.49□□□□□ -1.69
XRN1-208ENST00000470537 LITAFQ99732 161 aa4.49□□□□□ -1.69
XRN1-208ENST00000470537 LST1O00453 97 aa4.48□□□□□ -1.69
XRN1-208ENST00000470537 SERF1AO75920 110 aa4.48□□□□□ -1.69
XRN1-208ENST00000470537 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
XRN1-208ENST00000470537 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
XRN1-208ENST00000470537 IFITM1P13164 125 aa4.47□□□□□ -1.69
XRN1-208ENST00000470537 Q6ZVH6 145 aa4.47□□□□□ -1.69
XRN1-208ENST00000470537 SLC7A5P1Q8MH63 180 aa4.47□□□□□ -1.69
XRN1-208ENST00000470537 RBM12B-AS1Q9P1G2 102 aa4.47□□□□□ -1.69
XRN1-208ENST00000470537 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
XRN1-208ENST00000470537 MT2AP02795 61 aa4.46□□□□□ -1.7
XRN1-208ENST00000470537 IGFL1Q6UW32 110 aa4.46□□□□□ -1.7
XRN1-208ENST00000470537 SCGB1D4Q6XE38 83 aa4.46□□□□□ -1.7
XRN1-208ENST00000470537 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
XRN1-208ENST00000470537 SS18L2Q9UHA2 77 aa4.46□□□□□ -1.7
XRN1-208ENST00000470537 TRGC2P03986 189 aa4.45□□□□□ -1.7
XRN1-208ENST00000470537 OCIAD2Q56VL3 154 aa4.45□□□□□ -1.7
XRN1-208ENST00000470537 A8MUU9 505 aa4.44□□□□□ -1.7
XRN1-208ENST00000470537 MTURNQ8N3F0 131 aa4.43□□□□□ -1.7
XRN1-208ENST00000470537 PPDPFLQ8WWR9 84 aa4.43□□□□□ -1.7
XRN1-208ENST00000470537 YPEL4Q96NS1 127 aa4.43□□□□□ -1.7
XRN1-208ENST00000470537 hADV29S1A0JD25 119 aa4.42□□□□□ -1.7
XRN1-208ENST00000470537 SYS1-DBNDD2H3BUS1 97 aa4.42□□□□□ -1.7
XRN1-208ENST00000470537 SMIM11BQ8TCY0 68 aa4.42□□□□□ -1.7
XRN1-208ENST00000470537 SNHG12Q9BXW3 62 aa4.42□□□□□ -1.7
XRN1-208ENST00000470537 MT1FP04733 61 aa4.41□□□□□ -1.7
XRN1-208ENST00000470537 MT3P25713 68 aa4.41□□□□□ -1.7
XRN1-208ENST00000470537 LINC00575Q6W349 94 aa4.41□□□□□ -1.7
XRN1-208ENST00000470537 Q6ZQY7 126 aa4.41□□□□□ -1.7
XRN1-208ENST00000470537 SNCGO76070 127 aa4.39□□□□□ -1.71
XRN1-208ENST00000470537 UBE2V1Q13404 147 aa4.39□□□□□ -1.71
XRN1-208ENST00000470537 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
XRN1-208ENST00000470537 LINC01545Q5VT33 79 aa4.39□□□□□ -1.71
XRN1-208ENST00000470537 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.39□□□□□ -1.71
XRN1-208ENST00000470537 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
XRN1-208ENST00000470537 SNRPEP62304 92 aaKnown RBP4.38□□□□□ -1.71
XRN1-208ENST00000470537 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
XRN1-208ENST00000470537 TEN1Q86WV5 123 aa4.38□□□□□ -1.71
XRN1-208ENST00000470537 C12orf57Q99622 126 aa4.37□□□□□ -1.71
XRN1-208ENST00000470537 TTTY13Q9BZ97 58 aa4.37□□□□□ -1.71
XRN1-208ENST00000470537 LINC00313P59037 77 aa4.36□□□□□ -1.71
XRN1-208ENST00000470537 BVES-AS1Q5T3Y7 98 aa4.36□□□□□ -1.71
XRN1-208ENST00000470537 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
XRN1-208ENST00000470537 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
XRN1-208ENST00000470537 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
XRN1-208ENST00000470537 H3BUT2 72 aa4.33□□□□□ -1.72
XRN1-208ENST00000470537 A0A087WSZ3 146 aa4.32□□□□□ -1.72
XRN1-208ENST00000470537 A8MWP4 228 aa4.32□□□□□ -1.72
XRN1-208ENST00000470537 DSCR10P59022 87 aa4.32□□□□□ -1.72
XRN1-208ENST00000470537 SIGMAR1Q99720 223 aa4.32□□□□□ -1.72
XRN1-208ENST00000470537 C3orf79P0CE67 100 aa4.31□□□□□ -1.72
XRN1-208ENST00000470537 HRES1P13985 223 aa4.31□□□□□ -1.72
XRN1-208ENST00000470537 COLCA2A8K830 154 aa4.3□□□□□ -1.72
XRN1-208ENST00000470537 KRTDAPP60985 99 aa4.3□□□□□ -1.72
XRN1-208ENST00000470537 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
XRN1-208ENST00000470537 KRTAP16-1A8MUX0 517 aa4.29□□□□□ -1.72
XRN1-208ENST00000470537 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
XRN1-208ENST00000470537 IGKV4-1P06312 121 aa4.28□□□□□ -1.72
XRN1-208ENST00000470537 H3BMG7 143 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST1H2BKO60814 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST1H2BJP06899 126 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms