RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 KIAA1109Q2LD37 5005 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 EPM2AB3EWF7 344 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 LINC01547P58512 204 aaPredicted RBP2.95□□□□□ -1.94
SF3B1-208ENST00000470268 SCXQ7RTU7 201 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 SRRM2Q9UQ35 2752 aaKnown RBP2.95□□□□□ -1.94
SF3B1-208ENST00000470268 FAM236DA0A1B0GTK5 79 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 FAM236CP0DP71 79 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 KRTAP11-1Q8IUC1 163 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 SMIM11BQ8TCY0 68 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 DPH3Q96FX2 82 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 PLAC8Q9NZF1 115 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 LINC00474Q9P2X8 69 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 C22orf24Q9Y442 160 aa2.95□□□□□ -1.94
SF3B1-208ENST00000470268 NDUFC2O95298 119 aa2.94□□□□□ -1.94
SF3B1-208ENST00000470268 PHF5AQ7RTV0 110 aaKnown RBP2.94□□□□□ -1.94
SF3B1-208ENST00000470268 TRBV7-7A0A0K0K1E9 115 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 TEX49A0A1B0GTD5 131 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 LST1O00453 97 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 ATXN8Q156A1 80 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 C9orf153Q5TBE3 101 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 C3orf22Q8N5N4 141 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 C7orf33Q8WU49 177 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 LINC01600Q96MT4 127 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 RYR1P21817 5038 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 FAT1Q14517 4588 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 HSPG2P98160 4391 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 TRBV10-2A0A0K0K1G8 114 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 RPL37AP8A6NKH3 93 aa2.93□□□□□ -1.94
SF3B1-208ENST00000470268 MRPL55Q7Z7F7 128 aaKnown RBP2.93□□□□□ -1.94
SF3B1-208ENST00000470268 TRAV13-2A0A0B4J235 113 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 TRBV10-3A0A0K0K1G6 114 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 HRCT1Q6UXD1 115 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 NKAPP1Q8N9T2 125 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 IGLV1-50A0A075B6I6 118 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 FAM236AA0A1B0GUQ0 79 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 FAM236BA0A1B0GV22 79 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 FAM240AA0A1B0GVK7 77 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 M0R378 163 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 IGLV6-57P01721 117 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 SMR3BP02814 79 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-208ENST00000470268 RPL28P46779 137 aaKnown RBP2.92□□□□□ -1.94
SF3B1-208ENST00000470268 COPS9Q8WXC6 57 aa2.92□□□□□ -1.94
SF3B1-208ENST00000470268 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
SF3B1-208ENST00000470268 UQCRQO14949 82 aa2.91□□□□□ -1.94
SF3B1-208ENST00000470268 COX6CP09669 75 aa2.91□□□□□ -1.94
SF3B1-208ENST00000470268 H3BT86 120 aa2.9□□□□□ -1.94
SF3B1-208ENST00000470268 C6orf99Q4VX62 202 aa2.9□□□□□ -1.94
SF3B1-208ENST00000470268 S100A7L2Q5SY68 101 aa2.9□□□□□ -1.94
SF3B1-208ENST00000470268 Q5XG85 94 aa2.9□□□□□ -1.94
SF3B1-208ENST00000470268 IMUPQ9GZP8 106 aa2.9□□□□□ -1.94
SF3B1-208ENST00000470268 KCNQ1DNQ9H478 68 aa2.9□□□□□ -1.94
SF3B1-208ENST00000470268 PSORS1C2Q9UIG4 136 aa2.9□□□□□ -1.94
SF3B1-208ENST00000470268 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.95
SF3B1-208ENST00000470268 KRTAP4-16G5E9R7 235 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-208ENST00000470268 SPRR1AP35321 89 aa2.9□□□□□ -1.95
SF3B1-208ENST00000470268 UBE2BP63146 152 aa2.9□□□□□ -1.95
SF3B1-208ENST00000470268 TRAV23DV6A0A075B6W5 121 aa2.89□□□□□ -1.95
SF3B1-208ENST00000470268 BAALC-AS2P0C853 105 aa2.89□□□□□ -1.95
SF3B1-208ENST00000470268 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
SF3B1-208ENST00000470268 KRTAP10-4P60372 401 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-208ENST00000470268 ZNF73O43830 326 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-208ENST00000470268 COX7CP15954 63 aa2.88□□□□□ -1.95
SF3B1-208ENST00000470268 LINC00643Q86TS7 51 aa2.88□□□□□ -1.95
SF3B1-208ENST00000470268 PRAC1Q96KF2 57 aa2.88□□□□□ -1.95
SF3B1-208ENST00000470268 TRACP01848 142 aa2.88□□□□□ -1.95
SF3B1-208ENST00000470268 ACYP1P07311 99 aa2.88□□□□□ -1.95
SF3B1-208ENST00000470268 CRYGAP11844 174 aa2.88□□□□□ -1.95
SF3B1-208ENST00000470268 C1orf137Q5JT78 98 aa2.88□□□□□ -1.95
SF3B1-208ENST00000470268 REG3GQ6UW15 175 aa2.88□□□□□ -1.95
SF3B1-208ENST00000470268 hADV29S1A0JD25 119 aa2.87□□□□□ -1.95
SF3B1-208ENST00000470268 BCE1O60756 84 aa2.87□□□□□ -1.95
SF3B1-208ENST00000470268 PRLHP81277 87 aa2.87□□□□□ -1.95
SF3B1-208ENST00000470268 KRTAP13-1Q8IUC0 172 aa2.87□□□□□ -1.95
SF3B1-208ENST00000470268 SMCR5Q8TEV8 140 aa2.87□□□□□ -1.95
SF3B1-208ENST00000470268 A0A0U1RQV1 116 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 NOTCH2NLQ7Z3S9 236 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 Q9BRP9 147 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 HERC2O95714 4834 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 H0YGX0 51 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 ATOX1O00244 68 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 DNAL4O96015 105 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 IGLV7-43P04211 117 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 ELOF1P60002 83 aaKnown RBP2.86□□□□□ -1.95
SF3B1-208ENST00000470268 TMEM258P61165 79 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 RPL37AP61513 92 aaKnown RBP2.86□□□□□ -1.95
SF3B1-208ENST00000470268 Q5VSD8 79 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 LINC00575Q6W349 94 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 Q6ZRX8 168 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 CYSTM1Q9H1C7 97 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 C14orf132Q9NPU4 83 aa2.86□□□□□ -1.95
SF3B1-208ENST00000470268 ETDCA0A1B0GVM5 59 aa2.85□□□□□ -1.95
SF3B1-208ENST00000470268 ERC2-IT1O76042 136 aa2.85□□□□□ -1.95
SF3B1-208ENST00000470268 HIST1H4AP62805 103 aaKnown RBP2.85□□□□□ -1.95
SF3B1-208ENST00000470268 DSCR8Q96T75 97 aa2.85□□□□□ -1.95
SF3B1-208ENST00000470268 A0A087X002 238 aa2.85□□□□□ -1.95
SF3B1-208ENST00000470268 ZNF861PO60384 105 aa2.85□□□□□ -1.95
SF3B1-208ENST00000470268 COX7BP24311 80 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms