RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 CD164Q04900 197 aa8.34□□□□□ -1.07
SFXN3-205ENST00000470252 C1orf64Q8NEQ6 169 aa8.34□□□□□ -1.07
SFXN3-205ENST00000470252 PRLHP81277 87 aa8.32□□□□□ -1.08
SFXN3-205ENST00000470252 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
SFXN3-205ENST00000470252 DNHD1Q96M86 4753 aa8.31□□□□□ -1.08
SFXN3-205ENST00000470252 PRR4Q16378 134 aa8.31□□□□□ -1.08
SFXN3-205ENST00000470252 Q1T7F1 81 aa8.31□□□□□ -1.08
SFXN3-205ENST00000470252 A0A087WSZ3 146 aa8.3□□□□□ -1.08
SFXN3-205ENST00000470252 IGKV2-24A0A0C4DH68 120 aa8.3□□□□□ -1.08
SFXN3-205ENST00000470252 A0A096LNI7 61 aa8.28□□□□□ -1.08
SFXN3-205ENST00000470252 DNAH1Q9P2D7 4330 aa8.28□□□□□ -1.08
SFXN3-205ENST00000470252 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
SFXN3-205ENST00000470252 CMYA5Q8N3K9 4069 aa8.26□□□□□ -1.09
SFXN3-205ENST00000470252 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
SFXN3-205ENST00000470252 UBE2AP49459 152 aa8.26□□□□□ -1.09
SFXN3-205ENST00000470252 MP68P56378 58 aa8.26□□□□□ -1.09
SFXN3-205ENST00000470252 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
SFXN3-205ENST00000470252 C16orf90A8MZG2 172 aa8.25□□□□□ -1.09
SFXN3-205ENST00000470252 NDUFB1O75438 58 aa8.24□□□□□ -1.09
SFXN3-205ENST00000470252 PRB2P02812 416 aaPredicted RBP8.24□□□□□ -1.09
SFXN3-205ENST00000470252 LINC00208Q96KT6 92 aa8.23□□□□□ -1.09
SFXN3-205ENST00000470252 TRAV22A0A0B4J277 110 aa8.22□□□□□ -1.09
SFXN3-205ENST00000470252 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.1
SFXN3-205ENST00000470252 PSPHP1O15172 72 aa8.21□□□□□ -1.1
SFXN3-205ENST00000470252 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
SFXN3-205ENST00000470252 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
SFXN3-205ENST00000470252 NOTCH1P46531 2555 aa8.19□□□□□ -1.1
SFXN3-205ENST00000470252 H0Y9P7 68 aa8.19□□□□□ -1.1
SFXN3-205ENST00000470252 CNBPP62633 177 aaKnown RBP8.19□□□□□ -1.1
SFXN3-205ENST00000470252 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
SFXN3-205ENST00000470252 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
SFXN3-205ENST00000470252 DNAH3Q8TD57 4116 aa8.18□□□□□ -1.1
SFXN3-205ENST00000470252 B9D2Q9BPU9 175 aa8.18□□□□□ -1.1
SFXN3-205ENST00000470252 CHTF8P0CG12 524 aa8.18□□□□□ -1.1
SFXN3-205ENST00000470252 A8MWP4 228 aa8.15□□□□□ -1.1
SFXN3-205ENST00000470252 DNAH10Q8IVF4 4471 aa8.15□□□□□ -1.11
SFXN3-205ENST00000470252 SPRR1BP22528 89 aa8.14□□□□□ -1.11
SFXN3-205ENST00000470252 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
SFXN3-205ENST00000470252 SRRM2Q9UQ35 2752 aaKnown RBP8.14□□□□□ -1.11
SFXN3-205ENST00000470252 H3BPC8 53 aa8.13□□□□□ -1.11
SFXN3-205ENST00000470252 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
SFXN3-205ENST00000470252 A8MUN3 132 aa8.12□□□□□ -1.11
SFXN3-205ENST00000470252 H0Y9J4 135 aa8.12□□□□□ -1.11
SFXN3-205ENST00000470252 SPANXA2-OT1Q8N9U9 137 aa8.12□□□□□ -1.11
SFXN3-205ENST00000470252 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
SFXN3-205ENST00000470252 MGAM2Q2M2H8 2515 aa8.12□□□□□ -1.11
SFXN3-205ENST00000470252 NBEAL1Q6ZS30 2694 aa8.12□□□□□ -1.11
SFXN3-205ENST00000470252 K7EIL1 84 aa8.11□□□□□ -1.11
SFXN3-205ENST00000470252 UBE2DNLQ8IWF7 75 aa8.11□□□□□ -1.11
SFXN3-205ENST00000470252 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
SFXN3-205ENST00000470252 RBM12B-AS1Q9P1G2 102 aa8.09□□□□□ -1.11
SFXN3-205ENST00000470252 MMP24-AS1A0A0U1RRL7 71 aa8.08□□□□□ -1.12
SFXN3-205ENST00000470252 C9orf163Q8N9P6 203 aa8.07□□□□□ -1.12
SFXN3-205ENST00000470252 DNAH9Q9NYC9 4486 aa8.07□□□□□ -1.12
SFXN3-205ENST00000470252 LYSTQ99698 3801 aa8.07□□□□□ -1.12
SFXN3-205ENST00000470252 Q5VV11 94 aa8.06□□□□□ -1.12
SFXN3-205ENST00000470252 Q8N9P0 234 aaPredicted RBP8.04□□□□□ -1.12
SFXN3-205ENST00000470252 FBN3Q75N90 2809 aa8.04□□□□□ -1.12
SFXN3-205ENST00000470252 NDUFS5O43920 106 aa8.03□□□□□ -1.12
SFXN3-205ENST00000470252 TENM2Q9NT68 2774 aa8.03□□□□□ -1.12
SFXN3-205ENST00000470252 IGLV9-49A0A0B4J1Y8 123 aa8.03□□□□□ -1.12
SFXN3-205ENST00000470252 LIMD2Q9BT23 127 aa8.02□□□□□ -1.12
SFXN3-205ENST00000470252 PANO1I0J062 215 aa8.02□□□□□ -1.13
SFXN3-205ENST00000470252 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
SFXN3-205ENST00000470252 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
SFXN3-205ENST00000470252 PRR15LQ9BU68 103 aa8.01□□□□□ -1.13
SFXN3-205ENST00000470252 A8MU10 97 aa8.01□□□□□ -1.13
SFXN3-205ENST00000470252 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
SFXN3-205ENST00000470252 PCOTHQ58A44 107 aa8.01□□□□□ -1.13
SFXN3-205ENST00000470252 COA5Q86WW8 74 aa8□□□□□ -1.13
SFXN3-205ENST00000470252 Q96NJ1 140 aa8□□□□□ -1.13
SFXN3-205ENST00000470252 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
SFXN3-205ENST00000470252 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
SFXN3-205ENST00000470252 MEGF8Q7Z7M0 2845 aa7.99□□□□□ -1.13
SFXN3-205ENST00000470252 MOBPQ13875 183 aa7.97□□□□□ -1.13
SFXN3-205ENST00000470252 COL7A1Q02388 2944 aa7.97□□□□□ -1.13
SFXN3-205ENST00000470252 CSMD3Q7Z407 3707 aa7.97□□□□□ -1.13
SFXN3-205ENST00000470252 TP53AIP1Q9HCN2 124 aa7.97□□□□□ -1.13
SFXN3-205ENST00000470252 C8orf17Q9NRJ1 99 aa7.97□□□□□ -1.13
SFXN3-205ENST00000470252 STAB2Q8WWQ8 2551 aa7.96□□□□□ -1.13
SFXN3-205ENST00000470252 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.14
SFXN3-205ENST00000470252 A6NN06 94 aa7.95□□□□□ -1.14
SFXN3-205ENST00000470252 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
SFXN3-205ENST00000470252 IGHV6-1A0A0B4J1U7 121 aa7.94□□□□□ -1.14
SFXN3-205ENST00000470252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
SFXN3-205ENST00000470252 NBDYA0A0U1RRE5 68 aa7.94□□□□□ -1.14
SFXN3-205ENST00000470252 A0A1B0GVX0 72 aa7.92□□□□□ -1.14
SFXN3-205ENST00000470252 Q6ZR54 194 aa7.92□□□□□ -1.14
SFXN3-205ENST00000470252 Q75L30 129 aa7.92□□□□□ -1.14
SFXN3-205ENST00000470252 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
SFXN3-205ENST00000470252 LINC00483Q53H64 154 aa7.91□□□□□ -1.14
SFXN3-205ENST00000470252 Q6ZRN7 208 aaPredicted RBP7.91□□□□□ -1.14
SFXN3-205ENST00000470252 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
SFXN3-205ENST00000470252 DNAH7Q8WXX0 4024 aa7.91□□□□□ -1.14
SFXN3-205ENST00000470252 CDK2AP2O75956 126 aa7.91□□□□□ -1.14
SFXN3-205ENST00000470252 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.14
SFXN3-205ENST00000470252 LCA10Q71F78 164 aa7.9□□□□□ -1.14
SFXN3-205ENST00000470252 A6NED7 52 aa7.9□□□□□ -1.15
SFXN3-205ENST00000470252 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
SFXN3-205ENST00000470252 WWC2-AS2Q96NR7 200 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms