RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 ST20Q9HBF5 79 aa2.34□□□□□ -2.04
GCFC2-205ENST00000470197 LINC00299Q6ZSB3 139 aa2.33□□□□□ -2.04
GCFC2-205ENST00000470197 FAM19A2Q8N3H0 131 aa2.33□□□□□ -2.04
GCFC2-205ENST00000470197 CLEC2BQ92478 149 aa2.33□□□□□ -2.04
GCFC2-205ENST00000470197 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
GCFC2-205ENST00000470197 I3L3M4 83 aa2.33□□□□□ -2.04
GCFC2-205ENST00000470197 MT1HL1P0DM35 61 aa2.33□□□□□ -2.04
GCFC2-205ENST00000470197 Q5BKY6 102 aa2.33□□□□□ -2.04
GCFC2-205ENST00000470197 SPANXA1Q9NS26 97 aa2.33□□□□□ -2.04
GCFC2-205ENST00000470197 C7orf77A4D0Y5 90 aa2.32□□□□□ -2.04
GCFC2-205ENST00000470197 MANBALQ9NQG1 85 aa2.32□□□□□ -2.04
GCFC2-205ENST00000470197 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
GCFC2-205ENST00000470197 SPAG11BQ08648 103 aa2.32□□□□□ -2.04
GCFC2-205ENST00000470197 TMEM242Q9NWH2 141 aa2.32□□□□□ -2.04
GCFC2-205ENST00000470197 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
GCFC2-205ENST00000470197 RPL39LQ96EH5 51 aaKnown RBP2.32□□□□□ -2.04
GCFC2-205ENST00000470197 TOMM7Q9P0U1 55 aa2.32□□□□□ -2.04
GCFC2-205ENST00000470197 LINC00959A0A1B0GUT2 108 aa2.31□□□□□ -2.04
GCFC2-205ENST00000470197 NCR2O95944 276 aa2.31□□□□□ -2.04
GCFC2-205ENST00000470197 NDUFA1O15239 70 aa2.31□□□□□ -2.04
GCFC2-205ENST00000470197 GVQW2A0A096LPI5 108 aaPredicted RBP2.31□□□□□ -2.04
GCFC2-205ENST00000470197 K7ERU9 68 aa2.31□□□□□ -2.04
GCFC2-205ENST00000470197 FABP4P15090 132 aa2.3□□□□□ -2.04
GCFC2-205ENST00000470197 CIRBPQ14011 172 aaKnown RBP2.3□□□□□ -2.04
GCFC2-205ENST00000470197 C9orf62Q8N4C0 152 aa2.3□□□□□ -2.04
GCFC2-205ENST00000470197 PPP1R17O96001 155 aa2.3□□□□□ -2.04
GCFC2-205ENST00000470197 KRTAP26-1Q6PEX3 210 aa2.3□□□□□ -2.04
GCFC2-205ENST00000470197 A0A1B0GUT8 65 aa2.29□□□□□ -2.04
GCFC2-205ENST00000470197 RAB37Q96AX2 223 aa2.29□□□□□ -2.04
GCFC2-205ENST00000470197 C2orf88Q9BSF0 95 aa2.29□□□□□ -2.04
GCFC2-205ENST00000470197 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
GCFC2-205ENST00000470197 CKS2P33552 79 aa2.29□□□□□ -2.04
GCFC2-205ENST00000470197 NDUFA6P56556 154 aa2.29□□□□□ -2.04
GCFC2-205ENST00000470197 SMIM7Q9BQ49 75 aa2.28□□□□□ -2.04
GCFC2-205ENST00000470197 CDC42SE2Q9NRR3 84 aa2.28□□□□□ -2.04
GCFC2-205ENST00000470197 LRP1Q07954 4544 aaKnown RBP2.28□□□□□ -2.04
GCFC2-205ENST00000470197 HIGD1CA8MV81 97 aa2.28□□□□□ -2.04
GCFC2-205ENST00000470197 IFI27P40305 119 aaPredicted RBP2.28□□□□□ -2.05
GCFC2-205ENST00000470197 CLLU1Q5K131 121 aa2.28□□□□□ -2.05
GCFC2-205ENST00000470197 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
GCFC2-205ENST00000470197 LOC107984156A0A0G2JMH3 177 aa2.27□□□□□ -2.05
GCFC2-205ENST00000470197 S100A8P05109 93 aa2.27□□□□□ -2.05
GCFC2-205ENST00000470197 Q6ZUT4 128 aa2.27□□□□□ -2.05
GCFC2-205ENST00000470197 ARL17AQ8IVW1 177 aa2.27□□□□□ -2.05
GCFC2-205ENST00000470197 KRTAP10-7P60409 375 aaPredicted RBP2.27□□□□□ -2.05
GCFC2-205ENST00000470197 ADIRFQ15847 76 aa2.27□□□□□ -2.05
GCFC2-205ENST00000470197 A6NN06 94 aa2.26□□□□□ -2.05
GCFC2-205ENST00000470197 HBDP02042 147 aa2.26□□□□□ -2.05
GCFC2-205ENST00000470197 TMEM191AQ9H0A3 160 aa2.26□□□□□ -2.05
GCFC2-205ENST00000470197 Q1T7F1 81 aa2.26□□□□□ -2.05
GCFC2-205ENST00000470197 MRPL35Q9NZE8 188 aaKnown RBP2.26□□□□□ -2.05
GCFC2-205ENST00000470197 TRBV6-5A0A0K0K1A5 114 aa2.25□□□□□ -2.05
GCFC2-205ENST00000470197 F8W036 122 aa2.25□□□□□ -2.05
GCFC2-205ENST00000470197 RPL39P62891 51 aaKnown RBP2.25□□□□□ -2.05
GCFC2-205ENST00000470197 MRPL54Q6P161 138 aaKnown RBP2.25□□□□□ -2.05
GCFC2-205ENST00000470197 C2orf82Q6UX34 121 aa2.25□□□□□ -2.05
GCFC2-205ENST00000470197 LRP2P98164 4655 aa2.25□□□□□ -2.05
GCFC2-205ENST00000470197 ALKAL2Q6UX46 152 aa2.25□□□□□ -2.05
GCFC2-205ENST00000470197 UBE2D4Q9Y2X8 147 aa2.25□□□□□ -2.05
GCFC2-205ENST00000470197 UQCRQO14949 82 aa2.25□□□□□ -2.05
GCFC2-205ENST00000470197 TEN1Q86WV5 123 aa2.25□□□□□ -2.05
GCFC2-205ENST00000470197 POLR2KP53803 58 aaKnown RBP2.24□□□□□ -2.05
GCFC2-205ENST00000470197 HMCN2Q8NDA2 5059 aa2.24□□□□□ -2.05
GCFC2-205ENST00000470197 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
GCFC2-205ENST00000470197 C22orf24Q9Y442 160 aa2.24□□□□□ -2.05
GCFC2-205ENST00000470197 NDUFA5Q16718 116 aa2.24□□□□□ -2.05
GCFC2-205ENST00000470197 CNFNQ9BYD5 112 aa2.24□□□□□ -2.05
GCFC2-205ENST00000470197 C6orf48Q9UBA6 75 aa2.24□□□□□ -2.05
GCFC2-205ENST00000470197 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 TRBV30A0A0K0K1B3 111 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 D6R8Y8 96 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 C20orf78Q9BR46 151 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 RNF213Q63HN8 5207 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 SEC11AP67812 179 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 TMEM141Q96I45 108 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 SMIM2Q9BVW6 85 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 PRO0461Q9UI25 63 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 CCDC179H3BU77 68 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 NUPR1O60356 82 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 SPANXCQ9NY87 97 aa2.23□□□□□ -2.05
GCFC2-205ENST00000470197 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
GCFC2-205ENST00000470197 FP248Q71RG6 208 aaPredicted RBP2.22□□□□□ -2.05
GCFC2-205ENST00000470197 hDV103S1A0JD37 113 aa2.22□□□□□ -2.05
GCFC2-205ENST00000470197 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
GCFC2-205ENST00000470197 NDUFA12Q9UI09 145 aa2.22□□□□□ -2.05
GCFC2-205ENST00000470197 TRAV12-1A0A0B4J245 112 aa2.21□□□□□ -2.06
GCFC2-205ENST00000470197 BCE1O60756 84 aa2.21□□□□□ -2.06
GCFC2-205ENST00000470197 PEA15Q15121 130 aa2.21□□□□□ -2.06
GCFC2-205ENST00000470197 F8VRH5 84 aa2.21□□□□□ -2.06
GCFC2-205ENST00000470197 SMCO4Q9NRQ5 59 aa2.21□□□□□ -2.06
GCFC2-205ENST00000470197 H3BRM9 83 aa2.21□□□□□ -2.06
GCFC2-205ENST00000470197 PRLHP81277 87 aa2.21□□□□□ -2.06
GCFC2-205ENST00000470197 MRPS36P82909 103 aaKnown RBP2.21□□□□□ -2.06
GCFC2-205ENST00000470197 NHP2Q9NX24 153 aaKnown RBP2.21□□□□□ -2.06
GCFC2-205ENST00000470197 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
GCFC2-205ENST00000470197 ZNF625Q96I27 306 aaPredicted RBP2.2□□□□□ -2.06
GCFC2-205ENST00000470197 C12orf57Q99622 126 aa2.2□□□□□ -2.06
GCFC2-205ENST00000470197 C14orf132Q9NPU4 83 aa2.2□□□□□ -2.06
GCFC2-205ENST00000470197 LINC00158P58513 81 aa2.19□□□□□ -2.06
GCFC2-205ENST00000470197 CDKN2A-AS1Q9UH64 79 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms