RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FRAS1Q86XX4 4008 aa5.78□□□□□ -1.48
SMC1A-205ENST00000469129 KRTAP10-2P60368 255 aa5.77□□□□□ -1.49
SMC1A-205ENST00000469129 C3orf22Q8N5N4 141 aa5.77□□□□□ -1.49
SMC1A-205ENST00000469129 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
SMC1A-205ENST00000469129 SMIM29Q86T20 159 aa5.76□□□□□ -1.49
SMC1A-205ENST00000469129 Q8NBF4 154 aa5.76□□□□□ -1.49
SMC1A-205ENST00000469129 PSORS1C2Q9UIG4 136 aa5.76□□□□□ -1.49
SMC1A-205ENST00000469129 Q6ZSA8 131 aa5.75□□□□□ -1.49
SMC1A-205ENST00000469129 Q6ZVQ6 151 aa5.75□□□□□ -1.49
SMC1A-205ENST00000469129 FAT2Q9NYQ8 4349 aa5.74□□□□□ -1.49
SMC1A-205ENST00000469129 HECTD4Q9Y4D8 3996 aa5.74□□□□□ -1.49
SMC1A-205ENST00000469129 ZNF861PO60384 105 aa5.73□□□□□ -1.49
SMC1A-205ENST00000469129 CXCL6P80162 114 aa5.73□□□□□ -1.49
SMC1A-205ENST00000469129 CIRBP-AS1Q8TBR5 109 aa5.73□□□□□ -1.49
SMC1A-205ENST00000469129 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
SMC1A-205ENST00000469129 SCXQ7RTU7 201 aa5.72□□□□□ -1.49
SMC1A-205ENST00000469129 SPRR4Q96PI1 79 aa5.72□□□□□ -1.49
SMC1A-205ENST00000469129 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
SMC1A-205ENST00000469129 A0A1W2PNM2 257 aa5.71□□□□□ -1.5
SMC1A-205ENST00000469129 IGLV7-43P04211 117 aa5.71□□□□□ -1.5
SMC1A-205ENST00000469129 KRTAP10-1P60331 282 aa5.71□□□□□ -1.5
SMC1A-205ENST00000469129 RPL37AP61513 92 aaKnown RBP5.71□□□□□ -1.5
SMC1A-205ENST00000469129 NREPQ16612 68 aa5.71□□□□□ -1.5
SMC1A-205ENST00000469129 LINC00483Q53H64 154 aa5.71□□□□□ -1.5
SMC1A-205ENST00000469129 IGFL1Q6UW32 110 aa5.71□□□□□ -1.5
SMC1A-205ENST00000469129 CRYGAP11844 174 aa5.7□□□□□ -1.5
SMC1A-205ENST00000469129 HAMPP81172 84 aa5.7□□□□□ -1.5
SMC1A-205ENST00000469129 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
SMC1A-205ENST00000469129 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
SMC1A-205ENST00000469129 HIST1H4AP62805 103 aaKnown RBP5.69□□□□□ -1.5
SMC1A-205ENST00000469129 ANAPC13Q9BS18 74 aa5.69□□□□□ -1.5
SMC1A-205ENST00000469129 FAM30AQ9NZY2 134 aa5.69□□□□□ -1.5
SMC1A-205ENST00000469129 C9orf153Q5TBE3 101 aa5.68□□□□□ -1.5
SMC1A-205ENST00000469129 ATOX1O00244 68 aa5.67□□□□□ -1.5
SMC1A-205ENST00000469129 A0A1B0GVY2 172 aa5.66□□□□□ -1.5
SMC1A-205ENST00000469129 BPY2O14599 106 aa5.66□□□□□ -1.5
SMC1A-205ENST00000469129 DNAH8Q96JB1 4490 aa5.66□□□□□ -1.5
SMC1A-205ENST00000469129 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
SMC1A-205ENST00000469129 PKHD1P08F94 4074 aa5.66□□□□□ -1.5
SMC1A-205ENST00000469129 DNAH5Q8TE73 4624 aa5.65□□□□□ -1.5
SMC1A-205ENST00000469129 IGLV9-49A0A0B4J1Y8 123 aa5.65□□□□□ -1.5
SMC1A-205ENST00000469129 PKD1P98161 4303 aa5.65□□□□□ -1.51
SMC1A-205ENST00000469129 DYNC1H1Q14204 4646 aaKnown RBP5.64□□□□□ -1.51
SMC1A-205ENST00000469129 A0A087WSZ3 146 aa5.63□□□□□ -1.51
SMC1A-205ENST00000469129 A0A087WVE0 104 aa5.63□□□□□ -1.51
SMC1A-205ENST00000469129 SS18L2Q9UHA2 77 aa5.63□□□□□ -1.51
SMC1A-205ENST00000469129 MOBPQ13875 183 aa5.62□□□□□ -1.51
SMC1A-205ENST00000469129 FAM229BQ4G0N7 80 aa5.61□□□□□ -1.51
SMC1A-205ENST00000469129 SMIM20Q8N5G0 67 aa5.6□□□□□ -1.51
SMC1A-205ENST00000469129 A0A0G2JQZ4 141 aa5.59□□□□□ -1.51
SMC1A-205ENST00000469129 J3KT08 172 aa5.59□□□□□ -1.51
SMC1A-205ENST00000469129 IGKV4-1P06312 121 aa5.59□□□□□ -1.51
SMC1A-205ENST00000469129 CD164Q04900 197 aa5.58□□□□□ -1.52
SMC1A-205ENST00000469129 SSBP3-AS1Q7Z2R9 100 aa5.58□□□□□ -1.52
SMC1A-205ENST00000469129 LRP1BQ9NZR2 4599 aa5.57□□□□□ -1.52
SMC1A-205ENST00000469129 UQCRQO14949 82 aa5.56□□□□□ -1.52
SMC1A-205ENST00000469129 SPINK6Q6UWN8 80 aa5.56□□□□□ -1.52
SMC1A-205ENST00000469129 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
SMC1A-205ENST00000469129 KIAA1109Q2LD37 5005 aa5.55□□□□□ -1.52
SMC1A-205ENST00000469129 COX7CP15954 63 aa5.55□□□□□ -1.52
SMC1A-205ENST00000469129 DSCR10P59022 87 aa5.55□□□□□ -1.52
SMC1A-205ENST00000469129 Q8N9L7 120 aa5.55□□□□□ -1.52
SMC1A-205ENST00000469129 ANAPC11Q9NYG5 84 aa5.55□□□□□ -1.52
SMC1A-205ENST00000469129 HERC2O95714 4834 aa5.54□□□□□ -1.52
SMC1A-205ENST00000469129 LINC00472Q9H8W2 130 aa5.54□□□□□ -1.52
SMC1A-205ENST00000469129 TRAV7A0A075B6U4 112 aa5.53□□□□□ -1.52
SMC1A-205ENST00000469129 K7EQZ3 153 aa5.53□□□□□ -1.52
SMC1A-205ENST00000469129 NDUFB1O75438 58 aa5.53□□□□□ -1.52
SMC1A-205ENST00000469129 HRCT1Q6UXD1 115 aa5.53□□□□□ -1.52
SMC1A-205ENST00000469129 HSPG2P98160 4391 aa5.53□□□□□ -1.52
SMC1A-205ENST00000469129 A8MWP4 228 aa5.52□□□□□ -1.53
SMC1A-205ENST00000469129 HCG22E2RYF7 251 aa5.52□□□□□ -1.53
SMC1A-205ENST00000469129 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
SMC1A-205ENST00000469129 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
SMC1A-205ENST00000469129 APOBP04114 4563 aaKnown RBP5.52□□□□□ -1.53
SMC1A-205ENST00000469129 CCDC179H3BU77 68 aa5.51□□□□□ -1.53
SMC1A-205ENST00000469129 CDK2AP2O75956 126 aa5.51□□□□□ -1.53
SMC1A-205ENST00000469129 KRTAP1-4P0C5Y4 121 aa5.51□□□□□ -1.53
SMC1A-205ENST00000469129 SRRM2Q9UQ35 2752 aaKnown RBP5.51□□□□□ -1.53
SMC1A-205ENST00000469129 A0A087X002 238 aa5.5□□□□□ -1.53
SMC1A-205ENST00000469129 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
SMC1A-205ENST00000469129 ASB16-AS1Q495Z4 193 aa5.5□□□□□ -1.53
SMC1A-205ENST00000469129 PRR15Q8IV56 129 aa5.5□□□□□ -1.53
SMC1A-205ENST00000469129 LIMD2Q9BT23 127 aa5.5□□□□□ -1.53
SMC1A-205ENST00000469129 KRTAP13-2Q52LG2 175 aa5.49□□□□□ -1.53
SMC1A-205ENST00000469129 Q96NJ1 140 aa5.49□□□□□ -1.53
SMC1A-205ENST00000469129 RYR1P21817 5038 aa5.49□□□□□ -1.53
SMC1A-205ENST00000469129 SMR3BP02814 79 aaPredicted RBP5.48□□□□□ -1.53
SMC1A-205ENST00000469129 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
SMC1A-205ENST00000469129 Q5XG85 94 aa5.47□□□□□ -1.53
SMC1A-205ENST00000469129 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
SMC1A-205ENST00000469129 C4orf48Q5BLP8 95 aa5.46□□□□□ -1.54
SMC1A-205ENST00000469129 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
SMC1A-205ENST00000469129 A0A1B0GVX0 72 aa5.45□□□□□ -1.54
SMC1A-205ENST00000469129 FAM229AH3BQW9 127 aa5.45□□□□□ -1.54
SMC1A-205ENST00000469129 WFDC13Q8IUB5 93 aa5.45□□□□□ -1.54
SMC1A-205ENST00000469129 OCR1Q9BZK8 76 aa5.45□□□□□ -1.54
SMC1A-205ENST00000469129 KRTAP10-4P60372 401 aaPredicted RBP5.44□□□□□ -1.54
SMC1A-205ENST00000469129 RPS29P62273 56 aaKnown RBP5.44□□□□□ -1.54
SMC1A-205ENST00000469129 MMP24-AS1A0A0U1RRL7 71 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms