RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SCGB1D1O95968 90 aa11.71□□□□□ -0.53
TTC28-204ENST00000468807 HIST1H4GQ99525 98 aa11.71□□□□□ -0.53
TTC28-204ENST00000468807 RPL37P61927 97 aaKnown RBP11.68□□□□□ -0.54
TTC28-204ENST00000468807 KRTAP19-2Q3LHN2 52 aa11.68□□□□□ -0.54
TTC28-204ENST00000468807 Q6JHZ5 121 aa11.67□□□□□ -0.54
TTC28-204ENST00000468807 CLEC2BQ92478 149 aa11.67□□□□□ -0.54
TTC28-204ENST00000468807 FSIP2Q5CZC0 6907 aa11.67□□□□□ -0.54
TTC28-204ENST00000468807 BVES-AS1Q5T3Y7 98 aa11.66□□□□□ -0.54
TTC28-204ENST00000468807 IGFL1Q6UW32 110 aa11.66□□□□□ -0.54
TTC28-204ENST00000468807 S100A1P23297 94 aa11.65□□□□□ -0.54
TTC28-204ENST00000468807 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.65□□□□□ -0.54
TTC28-204ENST00000468807 OCIAD2Q56VL3 154 aa11.64□□□□□ -0.55
TTC28-204ENST00000468807 TRBV7-7A0A0K0K1E9 115 aa11.63□□□□□ -0.55
TTC28-204ENST00000468807 COX8AP10176 69 aa11.63□□□□□ -0.55
TTC28-204ENST00000468807 MT1HP80294 61 aa11.63□□□□□ -0.55
TTC28-204ENST00000468807 SNHG12Q9BXW3 62 aa11.62□□□□□ -0.55
TTC28-204ENST00000468807 LCE2DQ5TA82 110 aaPredicted RBP11.6□□□□□ -0.55
TTC28-204ENST00000468807 H3BUT2 72 aa11.58□□□□□ -0.56
TTC28-204ENST00000468807 PPDPFLQ8WWR9 84 aa11.58□□□□□ -0.56
TTC28-204ENST00000468807 RAB37Q96AX2 223 aa11.58□□□□□ -0.56
TTC28-204ENST00000468807 C14orf144Q96I85 54 aa11.56□□□□□ -0.56
TTC28-204ENST00000468807 DLEU1O43261 78 aa11.55□□□□□ -0.56
TTC28-204ENST00000468807 CFC1BP0CG36 223 aa11.55□□□□□ -0.56
TTC28-204ENST00000468807 CFC1P0CG37 223 aa11.55□□□□□ -0.56
TTC28-204ENST00000468807 COX6B2Q6YFQ2 88 aa11.55□□□□□ -0.56
TTC28-204ENST00000468807 OBSCN-AS1Q96MR7 158 aa11.54□□□□□ -0.56
TTC28-204ENST00000468807 PAM16Q9Y3D7 125 aa11.53□□□□□ -0.56
TTC28-204ENST00000468807 SNCGO76070 127 aa11.52□□□□□ -0.57
TTC28-204ENST00000468807 M0R2T5 61 aa11.51□□□□□ -0.57
TTC28-204ENST00000468807 LST1O00453 97 aa11.51□□□□□ -0.57
TTC28-204ENST00000468807 SPATA45Q537H7 98 aa11.5□□□□□ -0.57
TTC28-204ENST00000468807 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
TTC28-204ENST00000468807 H0YGX0 51 aa11.47□□□□□ -0.57
TTC28-204ENST00000468807 ATP11AUNQ6ZP68 121 aa11.47□□□□□ -0.57
TTC28-204ENST00000468807 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
TTC28-204ENST00000468807 HIGD1BQ9P298 99 aa11.47□□□□□ -0.57
TTC28-204ENST00000468807 FLGP20930 4061 aaPredicted RBP11.47□□□□□ -0.57
TTC28-204ENST00000468807 VAMP8Q9BV40 100 aa11.46□□□□□ -0.57
TTC28-204ENST00000468807 SS18L2Q9UHA2 77 aa11.45□□□□□ -0.58
TTC28-204ENST00000468807 NDUFV3P56181 108 aaKnown RBP11.44□□□□□ -0.58
TTC28-204ENST00000468807 KRTAP10-6P60371 365 aaPredicted RBP11.43□□□□□ -0.58
TTC28-204ENST00000468807 C2orf91Q6ZV80 131 aa11.43□□□□□ -0.58
TTC28-204ENST00000468807 Q75L30 129 aa11.43□□□□□ -0.58
TTC28-204ENST00000468807 Q96NJ1 140 aa11.43□□□□□ -0.58
TTC28-204ENST00000468807 LORP23490 312 aaPredicted RBP11.41□□□□□ -0.58
TTC28-204ENST00000468807 Q6Q795 121 aa11.41□□□□□ -0.58
TTC28-204ENST00000468807 FABP2P12104 132 aa11.4□□□□□ -0.58
TTC28-204ENST00000468807 TEN1Q86WV5 123 aa11.4□□□□□ -0.58
TTC28-204ENST00000468807 CEND1Q8N111 149 aa11.4□□□□□ -0.58
TTC28-204ENST00000468807 CRCT1Q9UGL9 99 aa11.4□□□□□ -0.58
TTC28-204ENST00000468807 TMEM238LA0A1B0GVL6 79 aa11.39□□□□□ -0.59
TTC28-204ENST00000468807 A6NJY4 79 aa11.39□□□□□ -0.59
TTC28-204ENST00000468807 A0A087WSZ3 146 aa11.38□□□□□ -0.59
TTC28-204ENST00000468807 H3BMG7 143 aa11.38□□□□□ -0.59
TTC28-204ENST00000468807 PRO1854Q9UHT4 67 aa11.38□□□□□ -0.59
TTC28-204ENST00000468807 GHRHP01286 108 aa11.37□□□□□ -0.59
TTC28-204ENST00000468807 A0A1B0GX51 115 aa11.34□□□□□ -0.59
TTC28-204ENST00000468807 FXYD2P54710 66 aa11.33□□□□□ -0.6
TTC28-204ENST00000468807 TRIAP1O43715 76 aa11.32□□□□□ -0.6
TTC28-204ENST00000468807 A0A1B0GV72 72 aa11.29□□□□□ -0.6
TTC28-204ENST00000468807 DNAL4O96015 105 aa11.28□□□□□ -0.6
TTC28-204ENST00000468807 C20orf166-AS1Q96NR2 134 aa11.28□□□□□ -0.6
TTC28-204ENST00000468807 SIGMAR1Q99720 223 aa11.28□□□□□ -0.6
TTC28-204ENST00000468807 PSMB2P49721 201 aa11.27□□□□□ -0.61
TTC28-204ENST00000468807 DSCR10P59022 87 aa11.27□□□□□ -0.61
TTC28-204ENST00000468807 A0A1W2PNM2 257 aa11.26□□□□□ -0.61
TTC28-204ENST00000468807 A8MUU9 505 aa11.25□□□□□ -0.61
TTC28-204ENST00000468807 K7ERJ3 54 aa11.24□□□□□ -0.61
TTC28-204ENST00000468807 ANKRD29Q8N6D5 301 aa11.24□□□□□ -0.61
TTC28-204ENST00000468807 ORMDL1Q9P0S3 153 aa11.24□□□□□ -0.61
TTC28-204ENST00000468807 HSD52Q0P140 79 aa11.22□□□□□ -0.61
TTC28-204ENST00000468807 TRBV20-1A0A075B6N2 111 aa11.19□□□□□ -0.62
TTC28-204ENST00000468807 IGKV4-1P06312 121 aa11.19□□□□□ -0.62
TTC28-204ENST00000468807 COX6CP09669 75 aa11.18□□□□□ -0.62
TTC28-204ENST00000468807 TRBV7-4A0A0J9YYF1 115 aa11.17□□□□□ -0.62
TTC28-204ENST00000468807 H3BQ85 93 aa11.17□□□□□ -0.62
TTC28-204ENST00000468807 LINC00313P59037 77 aa11.17□□□□□ -0.62
TTC28-204ENST00000468807 PYY3Q5JQD4 70 aa11.17□□□□□ -0.62
TTC28-204ENST00000468807 TMEM256-PLSCR3K7ERE1 68 aa11.16□□□□□ -0.62
TTC28-204ENST00000468807 DEFB116Q30KQ4 102 aa11.14□□□□□ -0.63
TTC28-204ENST00000468807 CCKP06307 115 aa11.13□□□□□ -0.63
TTC28-204ENST00000468807 TRACP01848 142 aa11.12□□□□□ -0.63
TTC28-204ENST00000468807 VPS25Q9BRG1 176 aa11.09□□□□□ -0.63
TTC28-204ENST00000468807 UQCR10Q9UDW1 63 aa11.08□□□□□ -0.64
TTC28-204ENST00000468807 IGHV6-1A0A0B4J1U7 121 aa11.07□□□□□ -0.64
TTC28-204ENST00000468807 KRTAP16-1A8MUX0 517 aa11.07□□□□□ -0.64
TTC28-204ENST00000468807 SCGB1C2P0DMR2 95 aa11.07□□□□□ -0.64
TTC28-204ENST00000468807 UBE2V1Q13404 147 aa11.07□□□□□ -0.64
TTC28-204ENST00000468807 NOTCH2NLQ7Z3S9 236 aa11.07□□□□□ -0.64
TTC28-204ENST00000468807 LINC00472Q9H8W2 130 aa11.06□□□□□ -0.64
TTC28-204ENST00000468807 FAM236DA0A1B0GTK5 79 aa11.05□□□□□ -0.64
TTC28-204ENST00000468807 FAM236CP0DP71 79 aa11.05□□□□□ -0.64
TTC28-204ENST00000468807 TMA7Q9Y2S6 64 aaKnown RBP11.05□□□□□ -0.64
TTC28-204ENST00000468807 RBM3P98179 157 aaKnown RBP11□□□□□ -0.65
TTC28-204ENST00000468807 DSCR8Q96T75 97 aa11□□□□□ -0.65
TTC28-204ENST00000468807 RBM12B-AS1Q9P1G2 102 aa10.97□□□□□ -0.65
TTC28-204ENST00000468807 USH2AO75445 5202 aa10.96□□□□□ -0.65
TTC28-204ENST00000468807 A0A1B0GVX0 72 aa10.95□□□□□ -0.66
TTC28-204ENST00000468807 KRTAP9-8Q9BYQ0 159 aa10.95□□□□□ -0.66
TTC28-204ENST00000468807 C8orf87E5RJ46 101 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms