RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 SACSQ9NZJ4 4579 aa4.75□□□□□ -1.65
COL6A3-208ENST00000468792 IGKV3D-7A0A0C4DH55 119 aa4.74□□□□□ -1.65
COL6A3-208ENST00000468792 M0R2N4 97 aa4.74□□□□□ -1.65
COL6A3-208ENST00000468792 FUSP35637 526 aaKnown RBP eCLIP4.74□□□□□ -1.65
COL6A3-208ENST00000468792 ST20-AS1Q8NBB2 130 aa4.74□□□□□ -1.65
COL6A3-208ENST00000468792 Q8NBF4 154 aa4.74□□□□□ -1.65
COL6A3-208ENST00000468792 DEFB105AQ8NG35 78 aa4.74□□□□□ -1.65
COL6A3-208ENST00000468792 LINC00476Q8WZB0 136 aa4.74□□□□□ -1.65
COL6A3-208ENST00000468792 PLAC8Q9NZF1 115 aa4.74□□□□□ -1.65
COL6A3-208ENST00000468792 RTL8CO15255 209 aa4.73□□□□□ -1.65
COL6A3-208ENST00000468792 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
COL6A3-208ENST00000468792 A0A1W2PNM2 257 aa4.72□□□□□ -1.65
COL6A3-208ENST00000468792 F8WEM9 126 aa4.72□□□□□ -1.65
COL6A3-208ENST00000468792 PANO1I0J062 215 aa4.72□□□□□ -1.65
COL6A3-208ENST00000468792 CRYGAP11844 174 aa4.72□□□□□ -1.65
COL6A3-208ENST00000468792 KRTAP11-1Q8IUC1 163 aa4.72□□□□□ -1.65
COL6A3-208ENST00000468792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.72□□□□□ -1.65
COL6A3-208ENST00000468792 PKD1P98161 4303 aa4.72□□□□□ -1.65
COL6A3-208ENST00000468792 UQCRQO14949 82 aa4.71□□□□□ -1.66
COL6A3-208ENST00000468792 RPL37AP61513 92 aaKnown RBP4.71□□□□□ -1.66
COL6A3-208ENST00000468792 PRLHP81277 87 aa4.71□□□□□ -1.66
COL6A3-208ENST00000468792 NREPQ16612 68 aa4.71□□□□□ -1.66
COL6A3-208ENST00000468792 IGLV5-52A0A0A0MRZ9 124 aa4.7□□□□□ -1.66
COL6A3-208ENST00000468792 LY6G6CO95867 125 aa4.7□□□□□ -1.66
COL6A3-208ENST00000468792 UBE2AP49459 152 aa4.7□□□□□ -1.66
COL6A3-208ENST00000468792 HAMPP81172 84 aa4.7□□□□□ -1.66
COL6A3-208ENST00000468792 SMIM20Q8N5G0 67 aa4.7□□□□□ -1.66
COL6A3-208ENST00000468792 HIGD2AQ9BW72 106 aa4.7□□□□□ -1.66
COL6A3-208ENST00000468792 HYDINQ4G0P3 5121 aa4.69□□□□□ -1.66
COL6A3-208ENST00000468792 COX7CP15954 63 aa4.69□□□□□ -1.66
COL6A3-208ENST00000468792 LINC00483Q53H64 154 aa4.69□□□□□ -1.66
COL6A3-208ENST00000468792 C3orf22Q8N5N4 141 aa4.69□□□□□ -1.66
COL6A3-208ENST00000468792 SERP2Q8N6R1 65 aa4.69□□□□□ -1.66
COL6A3-208ENST00000468792 DPH3Q96FX2 82 aa4.69□□□□□ -1.66
COL6A3-208ENST00000468792 A0A087WVE0 104 aa4.68□□□□□ -1.66
COL6A3-208ENST00000468792 PLA2G1BP04054 148 aaKnown RBP4.68□□□□□ -1.66
COL6A3-208ENST00000468792 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
COL6A3-208ENST00000468792 ZNF706Q9Y5V0 76 aaPredicted RBP4.68□□□□□ -1.66
COL6A3-208ENST00000468792 SRRM2Q9UQ35 2752 aaKnown RBP4.68□□□□□ -1.66
COL6A3-208ENST00000468792 LRP1BQ9NZR2 4599 aa4.67□□□□□ -1.66
COL6A3-208ENST00000468792 BPY2O14599 106 aa4.67□□□□□ -1.66
COL6A3-208ENST00000468792 CCDC179H3BU77 68 aa4.66□□□□□ -1.66
COL6A3-208ENST00000468792 ZNF861PO60384 105 aa4.66□□□□□ -1.66
COL6A3-208ENST00000468792 Q6ZSA8 131 aa4.65□□□□□ -1.67
COL6A3-208ENST00000468792 PSORS1C2Q9UIG4 136 aa4.65□□□□□ -1.67
COL6A3-208ENST00000468792 TRAV7A0A075B6U4 112 aa4.64□□□□□ -1.67
COL6A3-208ENST00000468792 IGKV4-1P06312 121 aa4.64□□□□□ -1.67
COL6A3-208ENST00000468792 DYNC1H1Q14204 4646 aaKnown RBP4.62□□□□□ -1.67
COL6A3-208ENST00000468792 IGLV7-43P04211 117 aa4.61□□□□□ -1.67
COL6A3-208ENST00000468792 DSCR10P59022 87 aa4.61□□□□□ -1.67
COL6A3-208ENST00000468792 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
COL6A3-208ENST00000468792 C9orf153Q5TBE3 101 aa4.61□□□□□ -1.67
COL6A3-208ENST00000468792 A0A087WSZ3 146 aa4.6□□□□□ -1.67
COL6A3-208ENST00000468792 J3KT08 172 aa4.6□□□□□ -1.67
COL6A3-208ENST00000468792 SCXQ7RTU7 201 aa4.6□□□□□ -1.67
COL6A3-208ENST00000468792 LINC00336Q6ZUF6 198 aa4.59□□□□□ -1.67
COL6A3-208ENST00000468792 CIRBP-AS1Q8TBR5 109 aa4.59□□□□□ -1.67
COL6A3-208ENST00000468792 LINC00472Q9H8W2 130 aa4.59□□□□□ -1.67
COL6A3-208ENST00000468792 VPS13BQ7Z7G8 4022 aa4.58□□□□□ -1.68
COL6A3-208ENST00000468792 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
COL6A3-208ENST00000468792 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
COL6A3-208ENST00000468792 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
COL6A3-208ENST00000468792 OCR1Q9BZK8 76 aa4.58□□□□□ -1.68
COL6A3-208ENST00000468792 FAM30AQ9NZY2 134 aa4.58□□□□□ -1.68
COL6A3-208ENST00000468792 SS18L2Q9UHA2 77 aa4.58□□□□□ -1.68
COL6A3-208ENST00000468792 RYR2Q92736 4967 aa4.57□□□□□ -1.68
COL6A3-208ENST00000468792 CD164Q04900 197 aa4.57□□□□□ -1.68
COL6A3-208ENST00000468792 PKHD1P08F94 4074 aa4.56□□□□□ -1.68
COL6A3-208ENST00000468792 LCE6AA0A183 80 aa4.56□□□□□ -1.68
COL6A3-208ENST00000468792 A8MWP4 228 aa4.56□□□□□ -1.68
COL6A3-208ENST00000468792 NDUFC1O43677 76 aa4.56□□□□□ -1.68
COL6A3-208ENST00000468792 KRTAP10-1P60331 282 aa4.56□□□□□ -1.68
COL6A3-208ENST00000468792 SSBP3-AS1Q7Z2R9 100 aa4.56□□□□□ -1.68
COL6A3-208ENST00000468792 Q8N9L7 120 aa4.56□□□□□ -1.68
COL6A3-208ENST00000468792 A0A0G2JQZ4 141 aa4.55□□□□□ -1.68
COL6A3-208ENST00000468792 HCG22E2RYF7 251 aa4.55□□□□□ -1.68
COL6A3-208ENST00000468792 K7EQZ3 153 aa4.55□□□□□ -1.68
COL6A3-208ENST00000468792 TMEM258P61165 79 aa4.55□□□□□ -1.68
COL6A3-208ENST00000468792 FAM229BQ4G0N7 80 aa4.55□□□□□ -1.68
COL6A3-208ENST00000468792 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
COL6A3-208ENST00000468792 APOBP04114 4563 aaKnown RBP4.55□□□□□ -1.68
COL6A3-208ENST00000468792 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
COL6A3-208ENST00000468792 KRTAP29-1A8MX34 341 aaPredicted RBP4.53□□□□□ -1.68
COL6A3-208ENST00000468792 ASB16-AS1Q495Z4 193 aa4.53□□□□□ -1.68
COL6A3-208ENST00000468792 C20orf197Q8N268 126 aa4.53□□□□□ -1.68
COL6A3-208ENST00000468792 NDUFB1O75438 58 aa4.52□□□□□ -1.69
COL6A3-208ENST00000468792 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
COL6A3-208ENST00000468792 MOBPQ13875 183 aa4.52□□□□□ -1.69
COL6A3-208ENST00000468792 Q5XG85 94 aa4.52□□□□□ -1.69
COL6A3-208ENST00000468792 Q96NJ1 140 aa4.52□□□□□ -1.69
COL6A3-208ENST00000468792 C5orf47Q569G3 176 aa4.51□□□□□ -1.69
COL6A3-208ENST00000468792 TMEM254Q8TBM7 123 aa4.51□□□□□ -1.69
COL6A3-208ENST00000468792 KMT2CQ8NEZ4 4911 aaKnown RBP4.5□□□□□ -1.69
COL6A3-208ENST00000468792 A0A0U1RQV1 116 aa4.5□□□□□ -1.69
COL6A3-208ENST00000468792 H7BZZ5 65 aa4.5□□□□□ -1.69
COL6A3-208ENST00000468792 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
COL6A3-208ENST00000468792 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
COL6A3-208ENST00000468792 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
COL6A3-208ENST00000468792 FAT1Q14517 4588 aa4.48□□□□□ -1.69
COL6A3-208ENST00000468792 H3BPC8 53 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms