RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 BVES-AS1Q5T3Y7 98 aa-3.16□□□□□ -2.92
SSB-208ENST00000468600 ZNF436-AS1Q8NC38 126 aaPredicted RBP-3.16□□□□□ -2.92
SSB-208ENST00000468600 ANKRD36BQ8N2N9 1353 aa-3.16□□□□□ -2.92
SSB-208ENST00000468600 VPS13CQ709C8 3753 aa-3.16□□□□□ -2.92
SSB-208ENST00000468600 LEAP2Q969E1 77 aa-3.17□□□□□ -2.92
SSB-208ENST00000468600 CEP250Q9BV73 2442 aa-3.18□□□□□ -2.92
SSB-208ENST00000468600 IQCF6A8MYZ5 107 aa-3.18□□□□□ -2.92
SSB-208ENST00000468600 TSTD1Q8NFU3 115 aa-3.18□□□□□ -2.92
SSB-208ENST00000468600 CENPHQ9H3R5 247 aa-3.18□□□□□ -2.92
SSB-208ENST00000468600 TMEM131LA2VDJ0 1609 aa-3.19□□□□□ -2.92
SSB-208ENST00000468600 TRBV25-1A0A075B6N4 114 aa-3.19□□□□□ -2.92
SSB-208ENST00000468600 ATP5EP56381 51 aaPredicted RBP-3.19□□□□□ -2.92
SSB-208ENST00000468600 RPS25P62851 125 aaKnown RBP-3.19□□□□□ -2.92
SSB-208ENST00000468600 CCDC58Q4VC31 144 aa-3.19□□□□□ -2.92
SSB-208ENST00000468600 PFDN5Q99471 154 aa-3.19□□□□□ -2.92
SSB-208ENST00000468600 SCAPERQ9BY12 1400 aa-3.19□□□□□ -2.92
SSB-208ENST00000468600 DPH3P1Q9H4G8 78 aa-3.2□□□□□ -2.92
SSB-208ENST00000468600 CACFD1Q9UGQ2 172 aa-3.2□□□□□ -2.92
SSB-208ENST00000468600 LRRC7Q96NW7 1537 aa-3.2□□□□□ -2.92
SSB-208ENST00000468600 FHAD1B1AJZ9 1412 aa-3.2□□□□□ -2.92
SSB-208ENST00000468600 PHLPP1O60346 1717 aa-3.21□□□□□ -2.92
SSB-208ENST00000468600 FAM24AA6NFZ4 105 aa-3.21□□□□□ -2.92
SSB-208ENST00000468600 KRTDAPP60985 99 aa-3.21□□□□□ -2.92
SSB-208ENST00000468600 DDA1Q9BW61 102 aa-3.21□□□□□ -2.92
SSB-208ENST00000468600 NESP48681 1621 aa-3.22□□□□□ -2.92
SSB-208ENST00000468600 LCE6AA0A183 80 aa-3.22□□□□□ -2.92
SSB-208ENST00000468600 HMGN3Q15651 99 aa-3.22□□□□□ -2.92
SSB-208ENST00000468600 MEIG1Q5JSS6 88 aa-3.22□□□□□ -2.92
SSB-208ENST00000468600 PKD1L3Q7Z443 1732 aa-3.22□□□□□ -2.93
SSB-208ENST00000468600 A0A1B0GUT8 65 aa-3.23□□□□□ -2.93
SSB-208ENST00000468600 OOSP1A8MZH6 123 aa-3.23□□□□□ -2.93
SSB-208ENST00000468600 DR1Q01658 176 aa-3.23□□□□□ -2.93
SSB-208ENST00000468600 MYH4Q9Y623 1939 aa-3.23□□□□□ -2.93
SSB-208ENST00000468600 EIF4G3O43432 1585 aaKnown RBP-3.24□□□□□ -2.93
SSB-208ENST00000468600 NWD1Q149M9 1564 aa-3.24□□□□□ -2.93
SSB-208ENST00000468600 UQCRHP07919 91 aa-3.24□□□□□ -2.93
SSB-208ENST00000468600 CKS1BP61024 79 aa-3.24□□□□□ -2.93
SSB-208ENST00000468600 RPS27P42677 84 aaKnown RBP-3.25□□□□□ -2.93
SSB-208ENST00000468600 RPS27LQ71UM5 84 aaKnown RBP-3.25□□□□□ -2.93
SSB-208ENST00000468600 ROBO1Q9Y6N7 1651 aa-3.25□□□□□ -2.93
SSB-208ENST00000468600 SUPT6HQ7KZ85 1726 aaKnown RBP-3.25□□□□□ -2.93
SSB-208ENST00000468600 ABCC2Q92887 1545 aa-3.25□□□□□ -2.93
SSB-208ENST00000468600 A0A1B0GUL6 1792 aa-3.25□□□□□ -2.93
SSB-208ENST00000468600 PLIN4Q96Q06 1357 aa-3.25□□□□□ -2.93
SSB-208ENST00000468600 FRYLO94915 3013 aa-3.26□□□□□ -2.93
SSB-208ENST00000468600 PCNTO95613 3336 aa-3.26□□□□□ -2.93
SSB-208ENST00000468600 DNMBPQ6XZF7 1577 aa-3.26□□□□□ -2.93
SSB-208ENST00000468600 TRAV21A0A0B4J279 112 aa-3.27□□□□□ -2.93
SSB-208ENST00000468600 ARPC4P59998 168 aa-3.27□□□□□ -2.93
SSB-208ENST00000468600 ETDBQ3ZM63 59 aa-3.27□□□□□ -2.93
SSB-208ENST00000468600 ACBD7Q8N6N7 88 aa-3.27□□□□□ -2.93
SSB-208ENST00000468600 KTN1Q86UP2 1357 aaKnown RBP-3.27□□□□□ -2.93
SSB-208ENST00000468600 ERVK-7P63135 1459 aa-3.28□□□□□ -2.93
SSB-208ENST00000468600 MLH3Q9UHC1 1453 aa-3.28□□□□□ -2.93
SSB-208ENST00000468600 FAM25AB3EWG3 89 aa-3.28□□□□□ -2.93
SSB-208ENST00000468600 FAM25CB3EWG5 89 aa-3.28□□□□□ -2.93
SSB-208ENST00000468600 FAM25GB3EWG6 89 aa-3.28□□□□□ -2.93
SSB-208ENST00000468600 CYB5AP00167 134 aa-3.28□□□□□ -2.93
SSB-208ENST00000468600 POLR1AO95602 1720 aaPredicted RBP-3.28□□□□□ -2.93
SSB-208ENST00000468600 FABP1P07148 127 aa-3.29□□□□□ -2.94
SSB-208ENST00000468600 MINOS1Q5TGZ0 78 aa-3.29□□□□□ -2.94
SSB-208ENST00000468600 ZNF720Q7Z2F6 126 aa-3.29□□□□□ -2.94
SSB-208ENST00000468600 CCNB3Q8WWL7 1395 aa-3.29□□□□□ -2.94
SSB-208ENST00000468600 KIF1AQ12756 1690 aa-3.3□□□□□ -2.94
SSB-208ENST00000468600 NDUFC1O43677 76 aa-3.3□□□□□ -2.94
SSB-208ENST00000468600 MPC2O95563 127 aa-3.3□□□□□ -2.94
SSB-208ENST00000468600 PAIP2BQ9ULR5 123 aaKnown RBP-3.3□□□□□ -2.94
SSB-208ENST00000468600 BAZ1AQ9NRL2 1556 aaPredicted RBP-3.3□□□□□ -2.94
SSB-208ENST00000468600 ITSN2Q9NZM3 1697 aa-3.3□□□□□ -2.94
SSB-208ENST00000468600 CHD1O14646 1710 aa-3.3□□□□□ -2.94
SSB-208ENST00000468600 NBEAP1P0C6P0 100 aa-3.31□□□□□ -2.94
SSB-208ENST00000468600 SFTA3P0C7M3 94 aa-3.31□□□□□ -2.94
SSB-208ENST00000468600 MRPS10P82664 201 aaKnown RBP-3.31□□□□□ -2.94
SSB-208ENST00000468600 LZICQ8WZA0 190 aa-3.31□□□□□ -2.94
SSB-208ENST00000468600 KIAA0586Q9BVV6 1533 aa-3.31□□□□□ -2.94
SSB-208ENST00000468600 PLCH1Q4KWH8 1693 aa-3.31□□□□□ -2.94
SSB-208ENST00000468600 RAPGEF2Q9Y4G8 1499 aa-3.32□□□□□ -2.94
SSB-208ENST00000468600 hADV29S1A0JD25 119 aa-3.32□□□□□ -2.94
SSB-208ENST00000468600 PLGLAQ15195 96 aa-3.32□□□□□ -2.94
SSB-208ENST00000468600 SMIM15Q7Z3B0 74 aa-3.32□□□□□ -2.94
SSB-208ENST00000468600 FCER1GP30273 86 aa-3.33□□□□□ -2.94
SSB-208ENST00000468600 MUC3AQ02505 3323 aa-3.34□□□□□ -2.94
SSB-208ENST00000468600 NAIPQ13075 1403 aa-3.34□□□□□ -2.94
SSB-208ENST00000468600 IFI27P40305 119 aaPredicted RBP-3.34□□□□□ -2.94
SSB-208ENST00000468600 C20orf78Q9BR46 151 aa-3.34□□□□□ -2.94
SSB-208ENST00000468600 RGPD1P0DJD0 1748 aa-3.34□□□□□ -2.94
SSB-208ENST00000468600 ZC3H13Q5T200 1668 aaKnown RBP-3.35□□□□□ -2.95
SSB-208ENST00000468600 DEFB131BA0A096LNP1 70 aa-3.35□□□□□ -2.95
SSB-208ENST00000468600 H3BQ15 152 aa-3.35□□□□□ -2.95
SSB-208ENST00000468600 MRPL33O75394 65 aaKnown RBP-3.35□□□□□ -2.95
SSB-208ENST00000468600 DCHS1Q96JQ0 3298 aa-3.35□□□□□ -2.95
SSB-208ENST00000468600 SVBPQ8N300 66 aa-3.36□□□□□ -2.95
SSB-208ENST00000468600 DOT1LQ8TEK3 1739 aa-3.36□□□□□ -2.95
SSB-208ENST00000468600 WDFY4Q6ZS81 3184 aa-3.37□□□□□ -2.95
SSB-208ENST00000468600 NDUFB1O75438 58 aa-3.37□□□□□ -2.95
SSB-208ENST00000468600 RPL13AP3Q6NVV1 102 aa-3.37□□□□□ -2.95
SSB-208ENST00000468600 C6orf48Q9UBA6 75 aa-3.37□□□□□ -2.95
SSB-208ENST00000468600 DDX60LQ5H9U9 1706 aaKnown RBP-3.37□□□□□ -2.95
SSB-208ENST00000468600 ATP10BO94823 1461 aa-3.37□□□□□ -2.95
SSB-208ENST00000468600 CD163L1Q9NR16 1453 aa-3.38□□□□□ -2.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms