RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 A6NED7 52 aa8.88□□□□□ -0.99
BRAT1-203ENST00000467558 RPL37AP61513 92 aaKnown RBP8.88□□□□□ -0.99
BRAT1-203ENST00000467558 A8MWP4 228 aa8.87□□□□□ -0.99
BRAT1-203ENST00000467558 H3BPC8 53 aa8.87□□□□□ -0.99
BRAT1-203ENST00000467558 SVEP1Q4LDE5 3571 aa8.87□□□□□ -0.99
BRAT1-203ENST00000467558 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
BRAT1-203ENST00000467558 K7EQZ3 153 aa8.85□□□□□ -0.99
BRAT1-203ENST00000467558 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
BRAT1-203ENST00000467558 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
BRAT1-203ENST00000467558 ERC2-IT1O76042 136 aa8.85□□□□□ -0.99
BRAT1-203ENST00000467558 SSBP3-AS1Q7Z2R9 100 aa8.84□□□□□ -0.99
BRAT1-203ENST00000467558 LINC00313P59037 77 aa8.84□□□□□ -0.99
BRAT1-203ENST00000467558 IGKV2D-30A0A075B6S6 120 aa8.83□□□□□ -1
BRAT1-203ENST00000467558 IGKV2-30P06310 120 aa8.83□□□□□ -1
BRAT1-203ENST00000467558 K7ERS5 55 aa8.83□□□□□ -1
BRAT1-203ENST00000467558 PSORS1C2Q9UIG4 136 aa8.82□□□□□ -1
BRAT1-203ENST00000467558 OBSCN-AS1Q96MR7 158 aa8.81□□□□□ -1
BRAT1-203ENST00000467558 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
BRAT1-203ENST00000467558 C8orf87E5RJ46 101 aa8.79□□□□□ -1
BRAT1-203ENST00000467558 IGLV7-43P04211 117 aa8.79□□□□□ -1
BRAT1-203ENST00000467558 A0A1W2PNM2 257 aa8.79□□□□□ -1
BRAT1-203ENST00000467558 PRR15Q8IV56 129 aa8.79□□□□□ -1
BRAT1-203ENST00000467558 SPENQ96T58 3664 aaKnown RBP8.78□□□□□ -1
BRAT1-203ENST00000467558 A0A0G2JQZ4 141 aa8.78□□□□□ -1
BRAT1-203ENST00000467558 A0A0U1RQV1 116 aa8.78□□□□□ -1
BRAT1-203ENST00000467558 SPRR4Q96PI1 79 aa8.78□□□□□ -1
BRAT1-203ENST00000467558 LINC00336Q6ZUF6 198 aa8.77□□□□□ -1.01
BRAT1-203ENST00000467558 RPS28P62857 69 aaKnown RBP8.77□□□□□ -1.01
BRAT1-203ENST00000467558 MRPL34Q9BQ48 92 aaKnown RBP8.76□□□□□ -1.01
BRAT1-203ENST00000467558 SPINK1P00995 79 aa8.75□□□□□ -1.01
BRAT1-203ENST00000467558 PSPHP1O15172 72 aa8.74□□□□□ -1.01
BRAT1-203ENST00000467558 ANAPC11Q9NYG5 84 aa8.73□□□□□ -1.01
BRAT1-203ENST00000467558 TNP2Q05952 138 aa8.73□□□□□ -1.01
BRAT1-203ENST00000467558 ACYP2P14621 99 aa8.72□□□□□ -1.01
BRAT1-203ENST00000467558 Q8NDZ9 215 aa8.72□□□□□ -1.01
BRAT1-203ENST00000467558 C8orf17Q9NRJ1 99 aa8.72□□□□□ -1.01
BRAT1-203ENST00000467558 LOC101927531A0A1B0GV80 90 aa8.72□□□□□ -1.01
BRAT1-203ENST00000467558 A0A1B0GVX0 72 aa8.71□□□□□ -1.02
BRAT1-203ENST00000467558 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.02
BRAT1-203ENST00000467558 TENM4Q6N022 2769 aa8.71□□□□□ -1.02
BRAT1-203ENST00000467558 Q96NJ1 140 aa8.7□□□□□ -1.02
BRAT1-203ENST00000467558 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
BRAT1-203ENST00000467558 C7orf65Q6ZTY9 151 aa8.69□□□□□ -1.02
BRAT1-203ENST00000467558 KRTAP26-1Q6PEX3 210 aa8.69□□□□□ -1.02
BRAT1-203ENST00000467558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
BRAT1-203ENST00000467558 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
BRAT1-203ENST00000467558 KMT2BQ9UMN6 2715 aaPredicted RBP8.69□□□□□ -1.02
BRAT1-203ENST00000467558 SMR3BP02814 79 aaPredicted RBP8.68□□□□□ -1.02
BRAT1-203ENST00000467558 SPRR1AP35321 89 aa8.67□□□□□ -1.02
BRAT1-203ENST00000467558 CUBNO60494 3623 aa8.66□□□□□ -1.02
BRAT1-203ENST00000467558 BSNQ9UPA5 3926 aa8.66□□□□□ -1.02
BRAT1-203ENST00000467558 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
BRAT1-203ENST00000467558 DSCR10P59022 87 aa8.63□□□□□ -1.03
BRAT1-203ENST00000467558 STAB2Q8WWQ8 2551 aa8.61□□□□□ -1.03
BRAT1-203ENST00000467558 PLAC8Q9NZF1 115 aa8.6□□□□□ -1.03
BRAT1-203ENST00000467558 ATP11AUNQ6ZP68 121 aa8.59□□□□□ -1.03
BRAT1-203ENST00000467558 PMAIP1Q13794 54 aa8.59□□□□□ -1.03
BRAT1-203ENST00000467558 A0A1B0GU69 56 aa8.58□□□□□ -1.04
BRAT1-203ENST00000467558 CSMD2Q7Z408 3487 aa8.58□□□□□ -1.04
BRAT1-203ENST00000467558 H7BZZ5 65 aa8.57□□□□□ -1.04
BRAT1-203ENST00000467558 C1orf195Q5TG92 126 aa8.57□□□□□ -1.04
BRAT1-203ENST00000467558 CD164Q04900 197 aa8.56□□□□□ -1.04
BRAT1-203ENST00000467558 TENM1Q9UKZ4 2725 aa8.55□□□□□ -1.04
BRAT1-203ENST00000467558 NBPF19A0A087WUL8 3843 aa8.53□□□□□ -1.04
BRAT1-203ENST00000467558 OTOGQ6ZRI0 2925 aa8.53□□□□□ -1.04
BRAT1-203ENST00000467558 SPRR1BP22528 89 aa8.53□□□□□ -1.04
BRAT1-203ENST00000467558 C4orf26Q17RF5 130 aa8.52□□□□□ -1.05
BRAT1-203ENST00000467558 PDZD2O15018 2839 aa8.52□□□□□ -1.05
BRAT1-203ENST00000467558 COA5Q86WW8 74 aa8.51□□□□□ -1.05
BRAT1-203ENST00000467558 OCR1Q9BZK8 76 aa8.51□□□□□ -1.05
BRAT1-203ENST00000467558 VWFP04275 2813 aa8.5□□□□□ -1.05
BRAT1-203ENST00000467558 FAM229BQ4G0N7 80 aa8.5□□□□□ -1.05
BRAT1-203ENST00000467558 J3QL48 77 aa8.49□□□□□ -1.05
BRAT1-203ENST00000467558 IGLV8-61A0A075B6I0 122 aa8.49□□□□□ -1.05
BRAT1-203ENST00000467558 PRO0628Q9UI54 55 aa8.48□□□□□ -1.05
BRAT1-203ENST00000467558 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
BRAT1-203ENST00000467558 SPANXA2-OT1Q8N9U9 137 aa8.44□□□□□ -1.06
BRAT1-203ENST00000467558 FBN1P35555 2871 aaKnown RBP8.43□□□□□ -1.06
BRAT1-203ENST00000467558 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
BRAT1-203ENST00000467558 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
BRAT1-203ENST00000467558 Q6ZR54 194 aa8.41□□□□□ -1.06
BRAT1-203ENST00000467558 ZFHX3Q15911 3703 aa8.4□□□□□ -1.06
BRAT1-203ENST00000467558 TENM3Q9P273 2699 aa8.4□□□□□ -1.06
BRAT1-203ENST00000467558 A8MUN3 132 aa8.4□□□□□ -1.06
BRAT1-203ENST00000467558 CYP4F30PQ9H0H9 118 aa8.38□□□□□ -1.07
BRAT1-203ENST00000467558 LINC00472Q9H8W2 130 aa8.38□□□□□ -1.07
BRAT1-203ENST00000467558 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
BRAT1-203ENST00000467558 KRTAP10-2P60368 255 aa8.36□□□□□ -1.07
BRAT1-203ENST00000467558 LCE6AA0A183 80 aa8.36□□□□□ -1.07
BRAT1-203ENST00000467558 PANO1I0J062 215 aa8.35□□□□□ -1.07
BRAT1-203ENST00000467558 KRTAP10-1P60331 282 aa8.35□□□□□ -1.07
BRAT1-203ENST00000467558 UQCR11O14957 56 aa8.31□□□□□ -1.08
BRAT1-203ENST00000467558 LINC00483Q53H64 154 aa8.3□□□□□ -1.08
BRAT1-203ENST00000467558 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
BRAT1-203ENST00000467558 VPS13CQ709C8 3753 aa8.27□□□□□ -1.09
BRAT1-203ENST00000467558 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.09
BRAT1-203ENST00000467558 Q8N1X5 172 aa8.25□□□□□ -1.09
BRAT1-203ENST00000467558 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
BRAT1-203ENST00000467558 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
BRAT1-203ENST00000467558 KRTAP7-1Q8IUC3 87 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms