RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 PRO1854Q9UHT4 67 aa14.59□□□□□ -0.07
SMC4-206ENST00000465903 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.57□□□□□ -0.08
SMC4-206ENST00000465903 A0A0G2JQZ4 141 aa14.56□□□□□ -0.08
SMC4-206ENST00000465903 CD164Q04900 197 aa14.55□□□□□ -0.08
SMC4-206ENST00000465903 H0YGX0 51 aa14.54□□□□□ -0.08
SMC4-206ENST00000465903 FAM218AQ96MZ4 157 aa14.53□□□□□ -0.08
SMC4-206ENST00000465903 KRTAP13-3Q3SY46 172 aa14.5□□□□□ -0.09
SMC4-206ENST00000465903 CDIP1Q9H305 208 aa14.5□□□□□ -0.09
SMC4-206ENST00000465903 LIMD2Q9BT23 127 aa14.48□□□□□ -0.09
SMC4-206ENST00000465903 F8WEM9 126 aa14.46□□□□□ -0.09
SMC4-206ENST00000465903 K7ERJ3 54 aa14.46□□□□□ -0.09
SMC4-206ENST00000465903 TRIAP1O43715 76 aa14.46□□□□□ -0.09
SMC4-206ENST00000465903 PPDPFLQ8WWR9 84 aa14.46□□□□□ -0.09
SMC4-206ENST00000465903 MUC17Q685J3 4493 aa14.45□□□□□ -0.1
SMC4-206ENST00000465903 IGLV8-61A0A075B6I0 122 aa14.45□□□□□ -0.1
SMC4-206ENST00000465903 OCIAD2Q56VL3 154 aa14.43□□□□□ -0.1
SMC4-206ENST00000465903 Q5XG85 94 aa14.42□□□□□ -0.1
SMC4-206ENST00000465903 A0A1B0GX51 115 aa14.41□□□□□ -0.1
SMC4-206ENST00000465903 SNCGO76070 127 aa14.4□□□□□ -0.1
SMC4-206ENST00000465903 SNHG12Q9BXW3 62 aa14.4□□□□□ -0.1
SMC4-206ENST00000465903 Q6JHZ5 121 aa14.39□□□□□ -0.11
SMC4-206ENST00000465903 IGFL1Q6UW32 110 aa14.39□□□□□ -0.11
SMC4-206ENST00000465903 SMIM6P0DI80 62 aa14.38□□□□□ -0.11
SMC4-206ENST00000465903 CLEC2BQ92478 149 aa14.37□□□□□ -0.11
SMC4-206ENST00000465903 PSMB2P49721 201 aa14.34□□□□□ -0.11
SMC4-206ENST00000465903 H3BUT2 72 aa14.32□□□□□ -0.12
SMC4-206ENST00000465903 C1orf195Q5TG92 126 aa14.32□□□□□ -0.12
SMC4-206ENST00000465903 LOC105371267A0A1B0GV96 52 aa14.31□□□□□ -0.12
SMC4-206ENST00000465903 NDUFV3P56181 108 aaKnown RBP14.3□□□□□ -0.12
SMC4-206ENST00000465903 MUC2Q02817 5179 aa14.29□□□□□ -0.12
SMC4-206ENST00000465903 TRBV7-7A0A0K0K1E9 115 aa14.28□□□□□ -0.12
SMC4-206ENST00000465903 COX6CP09669 75 aa14.28□□□□□ -0.12
SMC4-206ENST00000465903 TCL1BO95988 128 aa14.25□□□□□ -0.13
SMC4-206ENST00000465903 GHRHP01286 108 aa14.24□□□□□ -0.13
SMC4-206ENST00000465903 FABP2P12104 132 aa14.24□□□□□ -0.13
SMC4-206ENST00000465903 XP32Q5T750 250 aa14.23□□□□□ -0.13
SMC4-206ENST00000465903 ASB16-AS1Q495Z4 193 aa14.22□□□□□ -0.13
SMC4-206ENST00000465903 DNAL4O96015 105 aa14.21□□□□□ -0.13
SMC4-206ENST00000465903 H3BMG7 143 aa14.2□□□□□ -0.14
SMC4-206ENST00000465903 M0R143 59 aa14.2□□□□□ -0.14
SMC4-206ENST00000465903 ORMDL1Q9P0S3 153 aa14.2□□□□□ -0.14
SMC4-206ENST00000465903 C9orf92A6NGG3 77 aa14.18□□□□□ -0.14
SMC4-206ENST00000465903 SCGB1C2P0DMR2 95 aa14.17□□□□□ -0.14
SMC4-206ENST00000465903 Q6Q795 121 aa14.17□□□□□ -0.14
SMC4-206ENST00000465903 H3BQ85 93 aa14.15□□□□□ -0.14
SMC4-206ENST00000465903 LST1O00453 97 aa14.15□□□□□ -0.14
SMC4-206ENST00000465903 TRACP01848 142 aa14.15□□□□□ -0.14
SMC4-206ENST00000465903 TSTD3H0UI37 97 aa14.14□□□□□ -0.15
SMC4-206ENST00000465903 TEN1Q86WV5 123 aa14.14□□□□□ -0.15
SMC4-206ENST00000465903 TMEM256-PLSCR3K7ERE1 68 aa14.12□□□□□ -0.15
SMC4-206ENST00000465903 SEC61BP60468 96 aaKnown RBP14.12□□□□□ -0.15
SMC4-206ENST00000465903 A0A1W2PNM2 257 aa14.09□□□□□ -0.15
SMC4-206ENST00000465903 NAA38Q9BRA0 125 aaKnown RBP14.08□□□□□ -0.16
SMC4-206ENST00000465903 UBE2V1Q13404 147 aa14.07□□□□□ -0.16
SMC4-206ENST00000465903 KRTAP4-1Q9BYQ7 146 aa14.07□□□□□ -0.16
SMC4-206ENST00000465903 A0A1B0GV72 72 aa14.05□□□□□ -0.16
SMC4-206ENST00000465903 ANKRD29Q8N6D5 301 aa14.04□□□□□ -0.16
SMC4-206ENST00000465903 A0A087WSZ3 146 aa14.03□□□□□ -0.16
SMC4-206ENST00000465903 SS18L2Q9UHA2 77 aa14.03□□□□□ -0.16
SMC4-206ENST00000465903 FAT4Q6V0I7 4981 aa13.99□□□□□ -0.17
SMC4-206ENST00000465903 A0A0U1RQV1 116 aa13.99□□□□□ -0.17
SMC4-206ENST00000465903 BAALC-AS2P0C853 105 aa13.99□□□□□ -0.17
SMC4-206ENST00000465903 BATFQ16520 125 aa13.98□□□□□ -0.17
SMC4-206ENST00000465903 Q96NJ1 140 aa13.97□□□□□ -0.17
SMC4-206ENST00000465903 TRBV7-4A0A0J9YYF1 115 aa13.96□□□□□ -0.17
SMC4-206ENST00000465903 ATXN8Q156A1 80 aa13.96□□□□□ -0.17
SMC4-206ENST00000465903 PCOTHQ58A44 107 aa13.95□□□□□ -0.18
SMC4-206ENST00000465903 CCKP06307 115 aa13.91□□□□□ -0.18
SMC4-206ENST00000465903 RPL37P61927 97 aaKnown RBP13.91□□□□□ -0.18
SMC4-206ENST00000465903 RBM3P98179 157 aaKnown RBP13.91□□□□□ -0.18
SMC4-206ENST00000465903 TAX1BP3O14907 124 aa13.86□□□□□ -0.19
SMC4-206ENST00000465903 C9orf118A6NHY6 69 aa13.85□□□□□ -0.19
SMC4-206ENST00000465903 LYRM7Q5U5X0 104 aa13.85□□□□□ -0.19
SMC4-206ENST00000465903 OBSCN-AS1Q96MR7 158 aa13.85□□□□□ -0.19
SMC4-206ENST00000465903 DSCR8Q96T75 97 aa13.84□□□□□ -0.19
SMC4-206ENST00000465903 LCE2AQ5TA79 106 aaPredicted RBP13.83□□□□□ -0.2
SMC4-206ENST00000465903 TRBV20-1A0A075B6N2 111 aa13.82□□□□□ -0.2
SMC4-206ENST00000465903 VPS25Q9BRG1 176 aa13.81□□□□□ -0.2
SMC4-206ENST00000465903 LINC00472Q9H8W2 130 aa13.8□□□□□ -0.2
SMC4-206ENST00000465903 C9JAW5 83 aa13.79□□□□□ -0.2
SMC4-206ENST00000465903 JMJD7-PLA2G4BH0Y9G9 81 aa13.76□□□□□ -0.21
SMC4-206ENST00000465903 IGKV4-1P06312 121 aa13.76□□□□□ -0.21
SMC4-206ENST00000465903 A0A1W2PPM0 123 aa13.75□□□□□ -0.21
SMC4-206ENST00000465903 DEFB116Q30KQ4 102 aa13.75□□□□□ -0.21
SMC4-206ENST00000465903 Q75L30 129 aa13.75□□□□□ -0.21
SMC4-206ENST00000465903 SIGMAR1Q99720 223 aa13.75□□□□□ -0.21
SMC4-206ENST00000465903 Q6ZQT0 140 aa13.72□□□□□ -0.21
SMC4-206ENST00000465903 DSCR10P59022 87 aa13.71□□□□□ -0.21
SMC4-206ENST00000465903 LOC110117498A0A087WWA1 95 aa13.7□□□□□ -0.22
SMC4-206ENST00000465903 KRTAP19-2Q3LHN2 52 aa13.68□□□□□ -0.22
SMC4-206ENST00000465903 C20orf166-AS1Q96NR2 134 aa13.68□□□□□ -0.22
SMC4-206ENST00000465903 A8MUU9 505 aa13.66□□□□□ -0.22
SMC4-206ENST00000465903 C14orf132Q9NPU4 83 aa13.66□□□□□ -0.22
SMC4-206ENST00000465903 LCE2CQ5TA81 110 aa13.65□□□□□ -0.22
SMC4-206ENST00000465903 LINC00313P59037 77 aa13.64□□□□□ -0.23
SMC4-206ENST00000465903 C21orf62-AS1Q17RA5 79 aa13.64□□□□□ -0.23
SMC4-206ENST00000465903 NOTCH2NLQ7Z3S9 236 aa13.64□□□□□ -0.23
SMC4-206ENST00000465903 PDE6GP18545 87 aa13.63□□□□□ -0.23
SMC4-206ENST00000465903 ATP11AUNQ6ZP68 121 aa13.63□□□□□ -0.23
SMC4-206ENST00000465903 MTURNQ8N3F0 131 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms