RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 CCDC168Q8NDH2 2452 aa-0.56□□□□□ -2.5
GARNL3-213ENST00000464616 ITPR2Q14571 2701 aa-0.56□□□□□ -2.5
GARNL3-213ENST00000464616 DNHD1Q96M86 4753 aa-0.56□□□□□ -2.5
GARNL3-213ENST00000464616 PKHD1P08F94 4074 aa-0.56□□□□□ -2.5
GARNL3-213ENST00000464616 LRRK2Q5S007 2527 aa-0.57□□□□□ -2.5
GARNL3-213ENST00000464616 CFAP46Q8IYW2 2715 aa-0.57□□□□□ -2.5
GARNL3-213ENST00000464616 NWD1Q149M9 1564 aa-0.57□□□□□ -2.5
GARNL3-213ENST00000464616 SVEP1Q4LDE5 3571 aa-0.57□□□□□ -2.5
GARNL3-213ENST00000464616 C9orf92A6NGG3 77 aa-0.57□□□□□ -2.5
GARNL3-213ENST00000464616 CCDC88BA6NC98 1476 aa-0.57□□□□□ -2.5
GARNL3-213ENST00000464616 TNRC18O15417 2968 aaPredicted RBP-0.57□□□□□ -2.5
GARNL3-213ENST00000464616 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.57□□□□□ -2.5
GARNL3-213ENST00000464616 TACC2O95359 2948 aa-0.58□□□□□ -2.5
GARNL3-213ENST00000464616 IFI27P40305 119 aaPredicted RBP-0.58□□□□□ -2.5
GARNL3-213ENST00000464616 NESP48681 1621 aa-0.58□□□□□ -2.5
GARNL3-213ENST00000464616 UTP20O75691 2785 aaKnown RBP-0.58□□□□□ -2.5
GARNL3-213ENST00000464616 ANKRD11Q6UB99 2663 aaPredicted RBP-0.59□□□□□ -2.5
GARNL3-213ENST00000464616 ACACAQ13085 2346 aa-0.59□□□□□ -2.5
GARNL3-213ENST00000464616 UACAQ9BZF9 1416 aa-0.59□□□□□ -2.5
GARNL3-213ENST00000464616 KIF14Q15058 1648 aa-0.6□□□□□ -2.5
GARNL3-213ENST00000464616 A0A0C4DFX4 3053 aa-0.6□□□□□ -2.51
GARNL3-213ENST00000464616 UMAD1C9J7I0 102 aa-0.6□□□□□ -2.51
GARNL3-213ENST00000464616 MAGI3Q5TCQ9 1506 aa-0.6□□□□□ -2.51
GARNL3-213ENST00000464616 TMEM131LA2VDJ0 1609 aa-0.6□□□□□ -2.51
GARNL3-213ENST00000464616 SPG11Q96JI7 2443 aa-0.6□□□□□ -2.51
GARNL3-213ENST00000464616 LINC00158P58513 81 aa-0.61□□□□□ -2.51
GARNL3-213ENST00000464616 NBASA2RRP1 2371 aa-0.61□□□□□ -2.51
GARNL3-213ENST00000464616 DEPDC5O75140 1603 aa-0.61□□□□□ -2.51
GARNL3-213ENST00000464616 FAT3Q8TDW7 4589 aa-0.61□□□□□ -2.51
GARNL3-213ENST00000464616 PLXNC1O60486 1568 aa-0.62□□□□□ -2.51
GARNL3-213ENST00000464616 ATP5EP2Q5VTU8 51 aa-0.62□□□□□ -2.51
GARNL3-213ENST00000464616 WIZO95785 1651 aa-0.62□□□□□ -2.51
GARNL3-213ENST00000464616 SRCAPQ6ZRS2 3230 aa-0.62□□□□□ -2.51
GARNL3-213ENST00000464616 DNAH3Q8TD57 4116 aa-0.63□□□□□ -2.51
GARNL3-213ENST00000464616 DOT1LQ8TEK3 1739 aa-0.63□□□□□ -2.51
GARNL3-213ENST00000464616 CELSR3Q9NYQ7 3312 aa-0.63□□□□□ -2.51
GARNL3-213ENST00000464616 LCE6AA0A183 80 aa-0.63□□□□□ -2.51
GARNL3-213ENST00000464616 MT1AP04731 61 aa-0.63□□□□□ -2.51
GARNL3-213ENST00000464616 NCOA2Q15596 1464 aa-0.63□□□□□ -2.51
GARNL3-213ENST00000464616 NBEAQ8NFP9 2946 aa-0.63□□□□□ -2.51
GARNL3-213ENST00000464616 USP32Q8NFA0 1604 aa-0.64□□□□□ -2.51
GARNL3-213ENST00000464616 DNAH6Q9C0G6 4158 aa-0.64□□□□□ -2.51
GARNL3-213ENST00000464616 PKD1L2Q7Z442 2459 aa-0.64□□□□□ -2.51
GARNL3-213ENST00000464616 ARFGEF2Q9Y6D5 1785 aa-0.64□□□□□ -2.51
GARNL3-213ENST00000464616 H3BNG1 76 aa-0.64□□□□□ -2.51
GARNL3-213ENST00000464616 KNL1Q8NG31 2342 aa-0.65□□□□□ -2.51
GARNL3-213ENST00000464616 MUC17Q685J3 4493 aa-0.65□□□□□ -2.51
GARNL3-213ENST00000464616 THOC2Q8NI27 1593 aaKnown RBP-0.66□□□□□ -2.51
GARNL3-213ENST00000464616 DIP2BQ9P265 1576 aa-0.66□□□□□ -2.51
GARNL3-213ENST00000464616 PIK3C2BO00750 1634 aa-0.66□□□□□ -2.51
GARNL3-213ENST00000464616 ADIRFQ15847 76 aa-0.66□□□□□ -2.52
GARNL3-213ENST00000464616 SPRR2FQ96RM1 72 aa-0.66□□□□□ -2.52
GARNL3-213ENST00000464616 DDX60LQ5H9U9 1706 aaKnown RBP-0.67□□□□□ -2.52
GARNL3-213ENST00000464616 IFI6P09912 130 aa-0.67□□□□□ -2.52
GARNL3-213ENST00000464616 GNG2P59768 71 aa-0.67□□□□□ -2.52
GARNL3-213ENST00000464616 S100A13Q99584 98 aa-0.67□□□□□ -2.52
GARNL3-213ENST00000464616 ST20Q9HBF5 79 aa-0.67□□□□□ -2.52
GARNL3-213ENST00000464616 PDE4DIPQ5VU43 2346 aa-0.67□□□□□ -2.52
GARNL3-213ENST00000464616 LAMA1P25391 3075 aa-0.68□□□□□ -2.52
GARNL3-213ENST00000464616 LYNX1G3V0Z9 82 aa-0.68□□□□□ -2.52
GARNL3-213ENST00000464616 MRPL33O75394 65 aaKnown RBP-0.68□□□□□ -2.52
GARNL3-213ENST00000464616 DNAH2Q9P225 4427 aa-0.68□□□□□ -2.52
GARNL3-213ENST00000464616 ANKRD50Q9ULJ7 1429 aa-0.68□□□□□ -2.52
GARNL3-213ENST00000464616 HTTP42858 3142 aa-0.68□□□□□ -2.52
GARNL3-213ENST00000464616 PKD1P98161 4303 aa-0.68□□□□□ -2.52
GARNL3-213ENST00000464616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.69□□□□□ -2.52
GARNL3-213ENST00000464616 MYO9AB2RTY4 2548 aa-0.69□□□□□ -2.52
GARNL3-213ENST00000464616 PRLHP81277 87 aa-0.69□□□□□ -2.52
GARNL3-213ENST00000464616 PLECQ15149 4684 aaKnown RBP-0.69□□□□□ -2.52
GARNL3-213ENST00000464616 DEFB121Q5J5C9 76 aa-0.69□□□□□ -2.52
GARNL3-213ENST00000464616 DYNC1H1Q14204 4646 aaKnown RBP-0.69□□□□□ -2.52
GARNL3-213ENST00000464616 ANK3Q12955 4377 aaKnown RBP-0.69□□□□□ -2.52
GARNL3-213ENST00000464616 ZZEF1O43149 2961 aa-0.69□□□□□ -2.52
GARNL3-213ENST00000464616 CEP290O15078 2479 aa-0.7□□□□□ -2.52
GARNL3-213ENST00000464616 A0A087WXM4 84 aa-0.7□□□□□ -2.52
GARNL3-213ENST00000464616 NDUFA4O00483 81 aa-0.7□□□□□ -2.52
GARNL3-213ENST00000464616 PKHD1L1Q86WI1 4243 aa-0.7□□□□□ -2.52
GARNL3-213ENST00000464616 DEFB131BA0A096LNP1 70 aa-0.71□□□□□ -2.52
GARNL3-213ENST00000464616 NREPQ16612 68 aa-0.71□□□□□ -2.52
GARNL3-213ENST00000464616 TDRG1Q3Y452 100 aa-0.71□□□□□ -2.52
GARNL3-213ENST00000464616 RB1CC1Q8TDY2 1594 aa-0.71□□□□□ -2.52
GARNL3-213ENST00000464616 DMXL2Q8TDJ6 3036 aa-0.72□□□□□ -2.52
GARNL3-213ENST00000464616 TLN1Q9Y490 2541 aaKnown RBP-0.72□□□□□ -2.53
GARNL3-213ENST00000464616 SCN11AQ9UI33 1791 aa-0.73□□□□□ -2.53
GARNL3-213ENST00000464616 APOBP04114 4563 aaKnown RBP-0.73□□□□□ -2.53
GARNL3-213ENST00000464616 ABCC1P33527 1531 aa-0.73□□□□□ -2.53
GARNL3-213ENST00000464616 VPS13DQ5THJ4 4388 aa-0.73□□□□□ -2.53
GARNL3-213ENST00000464616 ZNF831Q5JPB2 1677 aa-0.73□□□□□ -2.53
GARNL3-213ENST00000464616 CFAP43Q8NDM7 1665 aa-0.73□□□□□ -2.53
GARNL3-213ENST00000464616 PLCH1Q4KWH8 1693 aa-0.74□□□□□ -2.53
GARNL3-213ENST00000464616 ITSN1Q15811 1721 aa-0.74□□□□□ -2.53
GARNL3-213ENST00000464616 H0YAA0 97 aa-0.74□□□□□ -2.53
GARNL3-213ENST00000464616 REV3LO60673 3130 aa-0.74□□□□□ -2.53
GARNL3-213ENST00000464616 LAMA3Q16787 3333 aa-0.74□□□□□ -2.53
GARNL3-213ENST00000464616 LYSTQ99698 3801 aa-0.75□□□□□ -2.53
GARNL3-213ENST00000464616 SMIM13P0DJ93 91 aa-0.75□□□□□ -2.53
GARNL3-213ENST00000464616 AKAP9Q99996 3911 aa-0.75□□□□□ -2.53
GARNL3-213ENST00000464616 ACACBO00763 2458 aa-0.75□□□□□ -2.53
GARNL3-213ENST00000464616 TRANK1O15050 2925 aa-0.75□□□□□ -2.53
GARNL3-213ENST00000464616 KALRNO60229 2985 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms