RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
HPS4-208ENST00000464362 ERC2-IT1O76042 136 aa5.95□□□□□ -1.46
HPS4-208ENST00000464362 LIMD2Q9BT23 127 aa5.95□□□□□ -1.46
HPS4-208ENST00000464362 CYSTM1Q9H1C7 97 aa5.95□□□□□ -1.46
HPS4-208ENST00000464362 KLKP1Q107X0 134 aa5.94□□□□□ -1.46
HPS4-208ENST00000464362 DNAH10OSP0CZ25 163 aa5.94□□□□□ -1.46
HPS4-208ENST00000464362 KCNQ1DNQ9H478 68 aa5.94□□□□□ -1.46
HPS4-208ENST00000464362 A8MUN3 132 aa5.93□□□□□ -1.46
HPS4-208ENST00000464362 IGLV1-50A0A075B6I6 118 aa5.93□□□□□ -1.46
HPS4-208ENST00000464362 NUPR2A6NF83 97 aa5.93□□□□□ -1.46
HPS4-208ENST00000464362 SPINK1P00995 79 aa5.92□□□□□ -1.46
HPS4-208ENST00000464362 TENM4Q6N022 2769 aa5.92□□□□□ -1.46
HPS4-208ENST00000464362 OBSCN-AS1Q96MR7 158 aa5.91□□□□□ -1.46
HPS4-208ENST00000464362 hDV103S1A0JD37 113 aa5.91□□□□□ -1.46
HPS4-208ENST00000464362 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
HPS4-208ENST00000464362 C16orf90A8MZG2 172 aa5.91□□□□□ -1.46
HPS4-208ENST00000464362 IGFL1Q6UW32 110 aa5.9□□□□□ -1.46
HPS4-208ENST00000464362 LINC01600Q96MT4 127 aa5.9□□□□□ -1.47
HPS4-208ENST00000464362 AKAP9Q99996 3911 aa5.9□□□□□ -1.47
HPS4-208ENST00000464362 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.47
HPS4-208ENST00000464362 SPAG11AQ6PDA7 123 aa5.89□□□□□ -1.47
HPS4-208ENST00000464362 K7EIL1 84 aa5.89□□□□□ -1.47
HPS4-208ENST00000464362 ANAPC11Q9NYG5 84 aa5.89□□□□□ -1.47
HPS4-208ENST00000464362 C1orf134Q5TEV5 83 aa5.88□□□□□ -1.47
HPS4-208ENST00000464362 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
HPS4-208ENST00000464362 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
HPS4-208ENST00000464362 TRAV22A0A0B4J277 110 aa5.86□□□□□ -1.47
HPS4-208ENST00000464362 NBDYA0A0U1RRE5 68 aa5.86□□□□□ -1.47
HPS4-208ENST00000464362 OXTP01178 125 aa5.86□□□□□ -1.47
HPS4-208ENST00000464362 PRR15Q8IV56 129 aa5.86□□□□□ -1.47
HPS4-208ENST00000464362 SPACA4Q8TDM5 124 aa5.85□□□□□ -1.47
HPS4-208ENST00000464362 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
HPS4-208ENST00000464362 H3BS24 57 aa5.84□□□□□ -1.48
HPS4-208ENST00000464362 RBM12B-AS1Q9P1G2 102 aa5.83□□□□□ -1.48
HPS4-208ENST00000464362 A0A1B0GW54 56 aa5.82□□□□□ -1.48
HPS4-208ENST00000464362 RTL8CO15255 209 aa5.82□□□□□ -1.48
HPS4-208ENST00000464362 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
HPS4-208ENST00000464362 LCA10Q71F78 164 aa5.81□□□□□ -1.48
HPS4-208ENST00000464362 A8MWP4 228 aa5.81□□□□□ -1.48
HPS4-208ENST00000464362 C7orf65Q6ZTY9 151 aa5.81□□□□□ -1.48
HPS4-208ENST00000464362 DMBT1Q9UGM3 2413 aaPredicted RBP5.81□□□□□ -1.48
HPS4-208ENST00000464362 IGLV8-61A0A075B6I0 122 aa5.8□□□□□ -1.48
HPS4-208ENST00000464362 CYP4F30PQ9H0H9 118 aa5.79□□□□□ -1.48
HPS4-208ENST00000464362 IGLV5-48A0A075B6I7 105 aa5.79□□□□□ -1.48
HPS4-208ENST00000464362 C8orf87E5RJ46 101 aa5.79□□□□□ -1.48
HPS4-208ENST00000464362 OCR1Q9BZK8 76 aa5.78□□□□□ -1.48
HPS4-208ENST00000464362 TLX1NBP0CAT3 122 aa5.78□□□□□ -1.48
HPS4-208ENST00000464362 K7ERS5 55 aa5.77□□□□□ -1.49
HPS4-208ENST00000464362 C9orf163Q8N9P6 203 aa5.77□□□□□ -1.49
HPS4-208ENST00000464362 FLG2Q5D862 2391 aaPredicted RBP5.77□□□□□ -1.49
HPS4-208ENST00000464362 DSCR10P59022 87 aa5.77□□□□□ -1.49
HPS4-208ENST00000464362 TP53AIP1Q9HCN2 124 aa5.77□□□□□ -1.49
HPS4-208ENST00000464362 COA5Q86WW8 74 aa5.76□□□□□ -1.49
HPS4-208ENST00000464362 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
HPS4-208ENST00000464362 C8orf17Q9NRJ1 99 aa5.74□□□□□ -1.49
HPS4-208ENST00000464362 LOC101927531A0A1B0GV80 90 aa5.73□□□□□ -1.49
HPS4-208ENST00000464362 FAM229BQ4G0N7 80 aa5.73□□□□□ -1.49
HPS4-208ENST00000464362 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
HPS4-208ENST00000464362 PDZD2O15018 2839 aa5.73□□□□□ -1.49
HPS4-208ENST00000464362 A0A1B0GU69 56 aa5.73□□□□□ -1.49
HPS4-208ENST00000464362 FBN1P35555 2871 aaKnown RBP5.72□□□□□ -1.49
HPS4-208ENST00000464362 PSORS1C2Q9UIG4 136 aa5.72□□□□□ -1.49
HPS4-208ENST00000464362 TENM3Q9P273 2699 aa5.72□□□□□ -1.49
HPS4-208ENST00000464362 LINC00313P59037 77 aa5.72□□□□□ -1.49
HPS4-208ENST00000464362 H3BPC8 53 aa5.72□□□□□ -1.49
HPS4-208ENST00000464362 Q1T7F1 81 aa5.71□□□□□ -1.49
HPS4-208ENST00000464362 A0A087WTM6 91 aa5.71□□□□□ -1.5
HPS4-208ENST00000464362 ACYP2P14621 99 aa5.71□□□□□ -1.5
HPS4-208ENST00000464362 TENM1Q9UKZ4 2725 aa5.7□□□□□ -1.5
HPS4-208ENST00000464362 VWFP04275 2813 aa5.7□□□□□ -1.5
HPS4-208ENST00000464362 ZNF861PO60384 105 aa5.69□□□□□ -1.5
HPS4-208ENST00000464362 APLNQ9ULZ1 77 aa5.69□□□□□ -1.5
HPS4-208ENST00000464362 KRTAP26-1Q6PEX3 210 aa5.69□□□□□ -1.5
HPS4-208ENST00000464362 KRTAP1-5Q9BYS1 174 aa5.69□□□□□ -1.5
HPS4-208ENST00000464362 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
HPS4-208ENST00000464362 A0A1B0GVX0 72 aa5.68□□□□□ -1.5
HPS4-208ENST00000464362 SPRR4Q96PI1 79 aa5.68□□□□□ -1.5
HPS4-208ENST00000464362 CNBPP62633 177 aaKnown RBP5.68□□□□□ -1.5
HPS4-208ENST00000464362 TYMSOSQ8TAI1 123 aa5.68□□□□□ -1.5
HPS4-208ENST00000464362 Q96NJ1 140 aa5.67□□□□□ -1.5
HPS4-208ENST00000464362 PRR26Q8N8Z3 221 aa5.67□□□□□ -1.5
HPS4-208ENST00000464362 IGLV5-37A0A075B6J1 123 aa5.67□□□□□ -1.5
HPS4-208ENST00000464362 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
HPS4-208ENST00000464362 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
HPS4-208ENST00000464362 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
HPS4-208ENST00000464362 PKD1L1Q8TDX9 2849 aa5.66□□□□□ -1.5
HPS4-208ENST00000464362 SMR3BP02814 79 aaPredicted RBP5.65□□□□□ -1.51
HPS4-208ENST00000464362 SPRR1AP35321 89 aa5.64□□□□□ -1.51
HPS4-208ENST00000464362 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
HPS4-208ENST00000464362 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
HPS4-208ENST00000464362 OTOGQ6ZRI0 2925 aa5.61□□□□□ -1.51
HPS4-208ENST00000464362 IGLV7-43P04211 117 aa5.61□□□□□ -1.51
HPS4-208ENST00000464362 TNP2Q05952 138 aa5.6□□□□□ -1.51
HPS4-208ENST00000464362 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
HPS4-208ENST00000464362 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
HPS4-208ENST00000464362 PANO1I0J062 215 aa5.58□□□□□ -1.52
HPS4-208ENST00000464362 SSBP3-AS1Q7Z2R9 100 aa5.57□□□□□ -1.52
HPS4-208ENST00000464362 Q8N1X5 172 aa5.57□□□□□ -1.52
HPS4-208ENST00000464362 MMP24-AS1A0A0U1RRL7 71 aa5.57□□□□□ -1.52
HPS4-208ENST00000464362 Q5VV11 94 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms