RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 UQCRQO14949 82 aa9.08□□□□□ -0.96
COL5A1-205ENST00000464187 COX7CP15954 63 aa9.07□□□□□ -0.96
COL5A1-205ENST00000464187 CXCL6P80162 114 aa9.07□□□□□ -0.96
COL5A1-205ENST00000464187 PHF5AQ7RTV0 110 aaKnown RBP9.05□□□□□ -0.96
COL5A1-205ENST00000464187 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
COL5A1-205ENST00000464187 C9orf153Q5TBE3 101 aa9.04□□□□□ -0.96
COL5A1-205ENST00000464187 PRLHP81277 87 aa9.03□□□□□ -0.96
COL5A1-205ENST00000464187 SCXQ7RTU7 201 aa9.03□□□□□ -0.96
COL5A1-205ENST00000464187 EPM2AB3EWF7 344 aa9.03□□□□□ -0.96
COL5A1-205ENST00000464187 KRTAP11-1Q8IUC1 163 aa9.03□□□□□ -0.96
COL5A1-205ENST00000464187 SERP2Q8N6R1 65 aa9.03□□□□□ -0.96
COL5A1-205ENST00000464187 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
COL5A1-205ENST00000464187 C1orf137Q5JT78 98 aa9.01□□□□□ -0.97
COL5A1-205ENST00000464187 SMIM29Q86T20 159 aa9.01□□□□□ -0.97
COL5A1-205ENST00000464187 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
COL5A1-205ENST00000464187 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
COL5A1-205ENST00000464187 FAM30AQ9NZY2 134 aa9.01□□□□□ -0.97
COL5A1-205ENST00000464187 PKHD1P08F94 4074 aa9□□□□□ -0.97
COL5A1-205ENST00000464187 DNAH8Q96JB1 4490 aa9□□□□□ -0.97
COL5A1-205ENST00000464187 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
COL5A1-205ENST00000464187 NREPQ16612 68 aa8.98□□□□□ -0.97
COL5A1-205ENST00000464187 CRYGAP11844 174 aa8.98□□□□□ -0.97
COL5A1-205ENST00000464187 Q8NBF4 154 aa8.98□□□□□ -0.97
COL5A1-205ENST00000464187 HIGD2AQ9BW72 106 aa8.98□□□□□ -0.97
COL5A1-205ENST00000464187 RYR3Q15413 4870 aa8.97□□□□□ -0.97
COL5A1-205ENST00000464187 Q6ZSA8 131 aa8.97□□□□□ -0.97
COL5A1-205ENST00000464187 A0A1B0GW54 56 aa8.96□□□□□ -0.97
COL5A1-205ENST00000464187 CIRBP-AS1Q8TBR5 109 aa8.96□□□□□ -0.98
COL5A1-205ENST00000464187 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
COL5A1-205ENST00000464187 H0Y9J4 135 aa8.94□□□□□ -0.98
COL5A1-205ENST00000464187 F8WEM9 126 aa8.94□□□□□ -0.98
COL5A1-205ENST00000464187 BCE1O60756 84 aa8.94□□□□□ -0.98
COL5A1-205ENST00000464187 IGKV4-1P06312 121 aa8.94□□□□□ -0.98
COL5A1-205ENST00000464187 Q8N9L7 120 aa8.94□□□□□ -0.98
COL5A1-205ENST00000464187 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
COL5A1-205ENST00000464187 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
COL5A1-205ENST00000464187 BPY2O14599 106 aa8.92□□□□□ -0.98
COL5A1-205ENST00000464187 IGFL1Q6UW32 110 aa8.91□□□□□ -0.98
COL5A1-205ENST00000464187 IGLV8-61A0A075B6I0 122 aa8.91□□□□□ -0.98
COL5A1-205ENST00000464187 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
COL5A1-205ENST00000464187 UBE2AP49459 152 aa8.9□□□□□ -0.98
COL5A1-205ENST00000464187 TRAV7A0A075B6U4 112 aa8.89□□□□□ -0.99
COL5A1-205ENST00000464187 SPRR1BP22528 89 aa8.89□□□□□ -0.99
COL5A1-205ENST00000464187 KRTAP13-1Q8IUC0 172 aa8.89□□□□□ -0.99
COL5A1-205ENST00000464187 PSORS1C2Q9UIG4 136 aa8.88□□□□□ -0.99
COL5A1-205ENST00000464187 DYNC1H1Q14204 4646 aaKnown RBP8.88□□□□□ -0.99
COL5A1-205ENST00000464187 SMIM20Q8N5G0 67 aa8.87□□□□□ -0.99
COL5A1-205ENST00000464187 SRRM2Q9UQ35 2752 aaKnown RBP8.85□□□□□ -0.99
COL5A1-205ENST00000464187 C20orf197Q8N268 126 aa8.83□□□□□ -1
COL5A1-205ENST00000464187 DSCR10P59022 87 aa8.82□□□□□ -1
COL5A1-205ENST00000464187 A0A087WSZ3 146 aa8.8□□□□□ -1
COL5A1-205ENST00000464187 TMEM258P61165 79 aa8.8□□□□□ -1
COL5A1-205ENST00000464187 APOBP04114 4563 aaKnown RBP8.78□□□□□ -1
COL5A1-205ENST00000464187 K7EQZ3 153 aa8.78□□□□□ -1
COL5A1-205ENST00000464187 ZNF861PO60384 105 aa8.78□□□□□ -1
COL5A1-205ENST00000464187 IGLV7-43P04211 117 aa8.77□□□□□ -1
COL5A1-205ENST00000464187 OCR1Q9BZK8 76 aa8.77□□□□□ -1
COL5A1-205ENST00000464187 KLKP1Q107X0 134 aa8.76□□□□□ -1.01
COL5A1-205ENST00000464187 VPS13BQ7Z7G8 4022 aa8.75□□□□□ -1.01
COL5A1-205ENST00000464187 DEFB116Q30KQ4 102 aa8.75□□□□□ -1.01
COL5A1-205ENST00000464187 SNURFQ9Y675 71 aa8.75□□□□□ -1.01
COL5A1-205ENST00000464187 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
COL5A1-205ENST00000464187 H7BZZ5 65 aa8.73□□□□□ -1.01
COL5A1-205ENST00000464187 SMR3BP02814 79 aaPredicted RBP8.73□□□□□ -1.01
COL5A1-205ENST00000464187 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
COL5A1-205ENST00000464187 FAT1Q14517 4588 aa8.7□□□□□ -1.02
COL5A1-205ENST00000464187 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
COL5A1-205ENST00000464187 TMEM254Q8TBM7 123 aa8.69□□□□□ -1.02
COL5A1-205ENST00000464187 ZNF706Q9Y5V0 76 aaPredicted RBP8.69□□□□□ -1.02
COL5A1-205ENST00000464187 RPL37AP61513 92 aaKnown RBP8.68□□□□□ -1.02
COL5A1-205ENST00000464187 LINC00472Q9H8W2 130 aa8.68□□□□□ -1.02
COL5A1-205ENST00000464187 J3KT08 172 aa8.67□□□□□ -1.02
COL5A1-205ENST00000464187 A0A0U1RQV1 116 aa8.66□□□□□ -1.02
COL5A1-205ENST00000464187 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
COL5A1-205ENST00000464187 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
COL5A1-205ENST00000464187 RPS28P62857 69 aaKnown RBP8.65□□□□□ -1.02
COL5A1-205ENST00000464187 EPPK1P58107 5090 aaKnown RBP8.64□□□□□ -1.03
COL5A1-205ENST00000464187 CDK2AP2O75956 126 aa8.64□□□□□ -1.03
COL5A1-205ENST00000464187 NDUFC1O43677 76 aa8.64□□□□□ -1.03
COL5A1-205ENST00000464187 ANAPC11Q9NYG5 84 aa8.64□□□□□ -1.03
COL5A1-205ENST00000464187 WFDC13Q8IUB5 93 aa8.63□□□□□ -1.03
COL5A1-205ENST00000464187 HSPG2P98160 4391 aa8.62□□□□□ -1.03
COL5A1-205ENST00000464187 A8MWP4 228 aa8.62□□□□□ -1.03
COL5A1-205ENST00000464187 MOBPQ13875 183 aa8.62□□□□□ -1.03
COL5A1-205ENST00000464187 PRR15Q8IV56 129 aa8.62□□□□□ -1.03
COL5A1-205ENST00000464187 OXTP01178 125 aa8.61□□□□□ -1.03
COL5A1-205ENST00000464187 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
COL5A1-205ENST00000464187 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
COL5A1-205ENST00000464187 HRCT1Q6UXD1 115 aa8.6□□□□□ -1.03
COL5A1-205ENST00000464187 Q96NJ1 140 aa8.6□□□□□ -1.03
COL5A1-205ENST00000464187 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
COL5A1-205ENST00000464187 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
COL5A1-205ENST00000464187 CASC2Q6XLA1 102 aa8.56□□□□□ -1.04
COL5A1-205ENST00000464187 RYR1P21817 5038 aa8.55□□□□□ -1.04
COL5A1-205ENST00000464187 PLA2G1BP04054 148 aaKnown RBP8.54□□□□□ -1.04
COL5A1-205ENST00000464187 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
COL5A1-205ENST00000464187 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
COL5A1-205ENST00000464187 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
COL5A1-205ENST00000464187 MMP24-AS1A0A0U1RRL7 71 aa8.54□□□□□ -1.04
COL5A1-205ENST00000464187 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms