RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 SPANXN1Q5VSR9 72 aa1.24□□□□□ -2.21
CCDC144A-211ENST00000463809 ATP11AUNQ6ZP68 121 aa1.24□□□□□ -2.21
CCDC144A-211ENST00000463809 OR5H6Q8NGV6 325 aa1.24□□□□□ -2.21
CCDC144A-211ENST00000463809 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
CCDC144A-211ENST00000463809 MGST2Q99735 147 aa1.24□□□□□ -2.21
CCDC144A-211ENST00000463809 NPCDR1Q9BY65 106 aa1.24□□□□□ -2.21
CCDC144A-211ENST00000463809 C22orf24Q9Y442 160 aa1.24□□□□□ -2.21
CCDC144A-211ENST00000463809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 LOC110117498A0A087WWA1 95 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 UBE2L5PA0A1B0GUS4 154 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 CST7O76096 145 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 CD3DP04234 171 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 ZNF25P17030 456 aaPredicted RBP1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 RPL37P61927 97 aaKnown RBP1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 NCS1P62166 190 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 RPS29P62273 56 aaKnown RBP1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 PRLHP81277 87 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 TEX261Q6UWH6 196 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 C5orf38Q86SI9 138 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 AP1S3Q96PC3 154 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 LIMD2Q9BT23 127 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 GGACTQ9BVM4 153 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 LSM2Q9Y333 95 aaKnown RBP1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 TPRKBQ9Y3C4 175 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 HSPB11Q9Y547 144 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 ARL2-SNX15V9GYD0 113 aa1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 FLGP20930 4061 aaPredicted RBP1.23□□□□□ -2.21
CCDC144A-211ENST00000463809 TRAV13-1A0A0B4J241 112 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 CCDC160A6NGH7 325 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 FAM25AB3EWG3 89 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 FAM25CB3EWG5 89 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 FAM25GB3EWG6 89 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 SLC25A6P12236 298 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 FGF7P21781 194 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 SDC2P34741 201 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 HBBP68871 147 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 C9orf153Q5TBE3 101 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 TMEM254Q8TBM7 123 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 BATF3Q9NR55 127 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 TMEM242Q9NWH2 141 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 NAT8BQ9UHF3 227 aa1.22□□□□□ -2.21
CCDC144A-211ENST00000463809 TRBV30A0A0K0K1B3 111 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 A0A1B0GX51 115 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 C17orf112F2Z3M2 114 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 J3KT08 172 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 RPS28P62857 69 aaKnown RBP1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 TMEM14EPQ6UXP3 125 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 NIT2Q9NQR4 276 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 CDC42SE1Q9NRR8 79 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 GSKIPQ9P0R6 139 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 C6orf48Q9UBA6 75 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 SCP2D1Q9UJQ7 156 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 ZFP30Q9Y2G7 519 aa1.21□□□□□ -2.22
CCDC144A-211ENST00000463809 TRBV7-6A0A0J9YX20 115 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 ZNF727A8MUV8 499 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 HIST1H2BKO60814 126 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 NCR2O95944 276 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 HIST1H2BJP06899 126 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 CKS1BP61024 79 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 GNGT1P63211 74 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 C5orf17Q8NAS9 161 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 TMEM229BQ8NBD8 167 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 OR10AG1Q8NH19 301 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 FAM167A-AS1Q96KT0 104 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 OBSCN-AS1Q96MR7 158 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 SPRR4Q96PI1 79 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 LAMTOR3Q9UHA4 124 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 LAMTOR2Q9Y2Q5 125 aa1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
CCDC144A-211ENST00000463809 M0QY20 66 aa1.19□□□□□ -2.22
CCDC144A-211ENST00000463809 AKAIN1P0CW23 69 aa1.19□□□□□ -2.22
CCDC144A-211ENST00000463809 RPL35P42766 123 aaKnown RBP1.19□□□□□ -2.22
CCDC144A-211ENST00000463809 SSBP3-AS1Q7Z2R9 100 aa1.19□□□□□ -2.22
CCDC144A-211ENST00000463809 PFDN1O60925 122 aa1.18□□□□□ -2.22
CCDC144A-211ENST00000463809 SFT2D2O95562 160 aa1.18□□□□□ -2.22
CCDC144A-211ENST00000463809 FABP2P12104 132 aa1.18□□□□□ -2.22
CCDC144A-211ENST00000463809 UBE2G1P62253 170 aa1.18□□□□□ -2.22
CCDC144A-211ENST00000463809 C2orf82Q6UX34 121 aa1.18□□□□□ -2.22
CCDC144A-211ENST00000463809 Q86TA4 180 aa1.18□□□□□ -2.22
CCDC144A-211ENST00000463809 CDC42SE2Q9NRR3 84 aa1.18□□□□□ -2.22
CCDC144A-211ENST00000463809 TOMM7Q9P0U1 55 aa1.18□□□□□ -2.22
CCDC144A-211ENST00000463809 C7orf77A4D0Y5 90 aa1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 I3L3M4 83 aa1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 INE1O15225 51 aa1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 FCER1GP30273 86 aa1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 FAUP35544 74 aaKnown RBP1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 FOXA3P55318 350 aaPredicted RBP1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 S100A12P80511 92 aa1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 SSBP1Q04837 148 aaKnown RBP1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 CHCHD1Q96BP2 118 aaKnown RBP1.17□□□□□ -2.22
CCDC144A-211ENST00000463809 A0A087WSZ3 146 aa1.16□□□□□ -2.22
CCDC144A-211ENST00000463809 TRBV27A0A0K0K1C4 114 aa1.16□□□□□ -2.22
CCDC144A-211ENST00000463809 C9JAW5 83 aa1.16□□□□□ -2.22
CCDC144A-211ENST00000463809 MRPS10P82664 201 aaKnown RBP1.16□□□□□ -2.22
CCDC144A-211ENST00000463809 Q5VV11 94 aa1.16□□□□□ -2.22
CCDC144A-211ENST00000463809 KRTAP8-1Q8IUC2 63 aa1.16□□□□□ -2.22
CCDC144A-211ENST00000463809 ETDCA0A1B0GVM5 59 aa1.15□□□□□ -2.23
CCDC144A-211ENST00000463809 DNAL4O96015 105 aa1.15□□□□□ -2.23
CCDC144A-211ENST00000463809 MT-ND4LP03901 98 aa1.15□□□□□ -2.23
CCDC144A-211ENST00000463809 LSM3P62310 102 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms