RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.96□□□□□ -0.82
VPS52-214ENST00000463486 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.82
VPS52-214ENST00000463486 PRO1933Q9H354 126 aa9.96□□□□□ -0.82
VPS52-214ENST00000463486 A0A0G2JQZ4 141 aa9.95□□□□□ -0.82
VPS52-214ENST00000463486 H0YGX0 51 aa9.95□□□□□ -0.82
VPS52-214ENST00000463486 K7ERJ3 54 aa9.95□□□□□ -0.82
VPS52-214ENST00000463486 TPRXLQ17RH7 258 aa9.95□□□□□ -0.82
VPS52-214ENST00000463486 CD164Q04900 197 aa9.94□□□□□ -0.82
VPS52-214ENST00000463486 TRIAP1O43715 76 aa9.92□□□□□ -0.82
VPS52-214ENST00000463486 SMIM6P0DI80 62 aa9.92□□□□□ -0.82
VPS52-214ENST00000463486 HRCT1Q6UXD1 115 aa9.92□□□□□ -0.82
VPS52-214ENST00000463486 IGLV8-61A0A075B6I0 122 aa9.91□□□□□ -0.82
VPS52-214ENST00000463486 LOC105371267A0A1B0GV96 52 aa9.91□□□□□ -0.82
VPS52-214ENST00000463486 PPDPFLQ8WWR9 84 aa9.9□□□□□ -0.82
VPS52-214ENST00000463486 KRTAP13-3Q3SY46 172 aa9.89□□□□□ -0.83
VPS52-214ENST00000463486 Q5XG85 94 aa9.88□□□□□ -0.83
VPS52-214ENST00000463486 SNCGO76070 127 aa9.87□□□□□ -0.83
VPS52-214ENST00000463486 OCIAD2Q56VL3 154 aa9.87□□□□□ -0.83
VPS52-214ENST00000463486 A0A1B0GX51 115 aa9.86□□□□□ -0.83
VPS52-214ENST00000463486 CLEC2BQ92478 149 aa9.85□□□□□ -0.83
VPS52-214ENST00000463486 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
VPS52-214ENST00000463486 IGFL1Q6UW32 110 aa9.84□□□□□ -0.83
VPS52-214ENST00000463486 F8WEM9 126 aa9.83□□□□□ -0.84
VPS52-214ENST00000463486 CDIP1Q9H305 208 aa9.83□□□□□ -0.84
VPS52-214ENST00000463486 Q6JHZ5 121 aa9.82□□□□□ -0.84
VPS52-214ENST00000463486 SNHG12Q9BXW3 62 aa9.82□□□□□ -0.84
VPS52-214ENST00000463486 H3BUT2 72 aa9.79□□□□□ -0.84
VPS52-214ENST00000463486 PSMB2P49721 201 aa9.79□□□□□ -0.84
VPS52-214ENST00000463486 C1orf195Q5TG92 126 aa9.79□□□□□ -0.84
VPS52-214ENST00000463486 NDUFV3P56181 108 aaKnown RBP9.78□□□□□ -0.84
VPS52-214ENST00000463486 COX6CP09669 75 aa9.76□□□□□ -0.85
VPS52-214ENST00000463486 TRBV7-7A0A0K0K1E9 115 aa9.75□□□□□ -0.85
VPS52-214ENST00000463486 M0R143 59 aa9.75□□□□□ -0.85
VPS52-214ENST00000463486 GHRHP01286 108 aa9.74□□□□□ -0.85
VPS52-214ENST00000463486 FABP2P12104 132 aa9.73□□□□□ -0.85
VPS52-214ENST00000463486 LST1O00453 97 aa9.72□□□□□ -0.85
VPS52-214ENST00000463486 ASB16-AS1Q495Z4 193 aa9.72□□□□□ -0.85
VPS52-214ENST00000463486 TSTD3H0UI37 97 aa9.71□□□□□ -0.86
VPS52-214ENST00000463486 H3BMG7 143 aa9.71□□□□□ -0.86
VPS52-214ENST00000463486 XP32Q5T750 250 aa9.71□□□□□ -0.86
VPS52-214ENST00000463486 Q6Q795 121 aa9.71□□□□□ -0.86
VPS52-214ENST00000463486 ORMDL1Q9P0S3 153 aa9.71□□□□□ -0.86
VPS52-214ENST00000463486 TCL1BO95988 128 aa9.7□□□□□ -0.86
VPS52-214ENST00000463486 TRACP01848 142 aa9.7□□□□□ -0.86
VPS52-214ENST00000463486 DNAL4O96015 105 aa9.69□□□□□ -0.86
VPS52-214ENST00000463486 SCGB1C2P0DMR2 95 aa9.68□□□□□ -0.86
VPS52-214ENST00000463486 H3BQ85 93 aa9.67□□□□□ -0.86
VPS52-214ENST00000463486 NAA38Q9BRA0 125 aaKnown RBP9.67□□□□□ -0.86
VPS52-214ENST00000463486 FAT4Q6V0I7 4981 aa9.67□□□□□ -0.86
VPS52-214ENST00000463486 TMEM256-PLSCR3K7ERE1 68 aa9.66□□□□□ -0.86
VPS52-214ENST00000463486 TEN1Q86WV5 123 aa9.66□□□□□ -0.86
VPS52-214ENST00000463486 A0A1W2PNM2 257 aa9.65□□□□□ -0.86
VPS52-214ENST00000463486 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
VPS52-214ENST00000463486 UBE2V1Q13404 147 aa9.63□□□□□ -0.87
VPS52-214ENST00000463486 KRTAP4-1Q9BYQ7 146 aa9.62□□□□□ -0.87
VPS52-214ENST00000463486 ANKRD29Q8N6D5 301 aa9.59□□□□□ -0.87
VPS52-214ENST00000463486 A0A087WSZ3 146 aa9.58□□□□□ -0.88
VPS52-214ENST00000463486 A0A1B0GV72 72 aa9.58□□□□□ -0.88
VPS52-214ENST00000463486 BAALC-AS2P0C853 105 aa9.58□□□□□ -0.88
VPS52-214ENST00000463486 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
VPS52-214ENST00000463486 BATFQ16520 125 aa9.58□□□□□ -0.88
VPS52-214ENST00000463486 Q96NJ1 140 aa9.57□□□□□ -0.88
VPS52-214ENST00000463486 TRBV7-4A0A0J9YYF1 115 aa9.56□□□□□ -0.88
VPS52-214ENST00000463486 ATXN8Q156A1 80 aa9.56□□□□□ -0.88
VPS52-214ENST00000463486 SS18L2Q9UHA2 77 aa9.56□□□□□ -0.88
VPS52-214ENST00000463486 TAX1BP3O14907 124 aa9.55□□□□□ -0.88
VPS52-214ENST00000463486 C9orf118A6NHY6 69 aa9.51□□□□□ -0.89
VPS52-214ENST00000463486 RBM3P98179 157 aaKnown RBP9.51□□□□□ -0.89
VPS52-214ENST00000463486 CCKP06307 115 aa9.5□□□□□ -0.89
VPS52-214ENST00000463486 TRBV20-1A0A075B6N2 111 aa9.49□□□□□ -0.89
VPS52-214ENST00000463486 PCOTHQ58A44 107 aa9.49□□□□□ -0.89
VPS52-214ENST00000463486 LYRM7Q5U5X0 104 aa9.49□□□□□ -0.89
VPS52-214ENST00000463486 RPL37P61927 97 aaKnown RBP9.48□□□□□ -0.89
VPS52-214ENST00000463486 A0A1W2PPM0 123 aa9.46□□□□□ -0.9
VPS52-214ENST00000463486 OBSCN-AS1Q96MR7 158 aa9.46□□□□□ -0.9
VPS52-214ENST00000463486 LINC00472Q9H8W2 130 aa9.46□□□□□ -0.9
VPS52-214ENST00000463486 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
VPS52-214ENST00000463486 A0A0U1RQV1 116 aa9.43□□□□□ -0.9
VPS52-214ENST00000463486 C9JAW5 83 aa9.43□□□□□ -0.9
VPS52-214ENST00000463486 LCE2AQ5TA79 106 aaPredicted RBP9.42□□□□□ -0.9
VPS52-214ENST00000463486 LOC110117498A0A087WWA1 95 aa9.41□□□□□ -0.9
VPS52-214ENST00000463486 JMJD7-PLA2G4BH0Y9G9 81 aa9.41□□□□□ -0.9
VPS52-214ENST00000463486 Q6ZQT0 140 aa9.41□□□□□ -0.9
VPS52-214ENST00000463486 VPS25Q9BRG1 176 aa9.4□□□□□ -0.9
VPS52-214ENST00000463486 DEFB116Q30KQ4 102 aa9.39□□□□□ -0.91
VPS52-214ENST00000463486 Q75L30 129 aa9.39□□□□□ -0.91
VPS52-214ENST00000463486 IGKV4-1P06312 121 aa9.38□□□□□ -0.91
VPS52-214ENST00000463486 KRTAP19-2Q3LHN2 52 aa9.38□□□□□ -0.91
VPS52-214ENST00000463486 SIGMAR1Q99720 223 aa9.36□□□□□ -0.91
VPS52-214ENST00000463486 H3BT86 120 aa9.35□□□□□ -0.91
VPS52-214ENST00000463486 DSCR10P59022 87 aa9.35□□□□□ -0.91
VPS52-214ENST00000463486 COL5A1-AS1Q5SY13 56 aa9.35□□□□□ -0.91
VPS52-214ENST00000463486 LCE2CQ5TA81 110 aa9.35□□□□□ -0.91
VPS52-214ENST00000463486 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
VPS52-214ENST00000463486 C14orf132Q9NPU4 83 aa9.35□□□□□ -0.91
VPS52-214ENST00000463486 A8MUU9 505 aa9.34□□□□□ -0.91
VPS52-214ENST00000463486 PDE6GP18545 87 aa9.34□□□□□ -0.91
VPS52-214ENST00000463486 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
VPS52-214ENST00000463486 MTURNQ8N3F0 131 aa9.34□□□□□ -0.91
VPS52-214ENST00000463486 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms