RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
HERC4-208ENST00000463478 FDCSPQ8NFU4 85 aa0.85□□□□□ -2.27
HERC4-208ENST00000463478 ERVK-7P63135 1459 aa0.85□□□□□ -2.27
HERC4-208ENST00000463478 CLTCQ00610 1675 aaKnown RBP0.84□□□□□ -2.27
HERC4-208ENST00000463478 ZNF831Q5JPB2 1677 aa0.84□□□□□ -2.27
HERC4-208ENST00000463478 MAP3K1Q13233 1512 aa0.84□□□□□ -2.27
HERC4-208ENST00000463478 KIAA1551Q9HCM1 1747 aa0.84□□□□□ -2.27
HERC4-208ENST00000463478 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.27
HERC4-208ENST00000463478 D6R8Y8 96 aa0.84□□□□□ -2.27
HERC4-208ENST00000463478 F8WEM9 126 aa0.84□□□□□ -2.27
HERC4-208ENST00000463478 ACYP1P07311 99 aa0.84□□□□□ -2.27
HERC4-208ENST00000463478 MUSTN1Q8IVN3 82 aa0.84□□□□□ -2.27
HERC4-208ENST00000463478 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
HERC4-208ENST00000463478 CCDC18Q5T9S5 1454 aa0.84□□□□□ -2.28
HERC4-208ENST00000463478 WNK3Q9BYP7 1800 aa0.84□□□□□ -2.28
HERC4-208ENST00000463478 DNMBPQ6XZF7 1577 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 KIF14Q15058 1648 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 LEPROTL1O95214 131 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 LELP1Q5T871 98 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 SPINK6Q6UWN8 80 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 PSENENQ9NZ42 101 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 PRO0255Q9UI72 69 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 MAGI2Q86UL8 1455 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 FAT1Q14517 4588 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 PKHD1L1Q86WI1 4243 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 RGPD3A6NKT7 1758 aaPredicted RBP0.83□□□□□ -2.28
HERC4-208ENST00000463478 RGPD4Q7Z3J3 1758 aa0.83□□□□□ -2.28
HERC4-208ENST00000463478 CCDC141Q6ZP82 1450 aa0.82□□□□□ -2.28
HERC4-208ENST00000463478 I3L2K1 104 aa0.82□□□□□ -2.28
HERC4-208ENST00000463478 GNGT1P63211 74 aa0.82□□□□□ -2.28
HERC4-208ENST00000463478 LINC00643Q86TS7 51 aa0.82□□□□□ -2.28
HERC4-208ENST00000463478 Q8IZM0 81 aa0.82□□□□□ -2.28
HERC4-208ENST00000463478 MAST1Q9Y2H9 1570 aa0.82□□□□□ -2.28
HERC4-208ENST00000463478 ITSN2Q9NZM3 1697 aa0.81□□□□□ -2.28
HERC4-208ENST00000463478 KANTRA0A1W2PQU2 76 aa0.81□□□□□ -2.28
HERC4-208ENST00000463478 C6orf201Q7Z4U5 140 aa0.81□□□□□ -2.28
HERC4-208ENST00000463478 S100A13Q99584 98 aa0.81□□□□□ -2.28
HERC4-208ENST00000463478 SCN7AQ01118 1682 aa0.81□□□□□ -2.28
HERC4-208ENST00000463478 A0A0G2JMZ2 1700 aa0.81□□□□□ -2.28
HERC4-208ENST00000463478 A0A1B0GU69 56 aa0.8□□□□□ -2.28
HERC4-208ENST00000463478 NMSQ5H8A3 153 aa0.8□□□□□ -2.28
HERC4-208ENST00000463478 UBE2D4Q9Y2X8 147 aa0.8□□□□□ -2.28
HERC4-208ENST00000463478 DNAH6Q9C0G6 4158 aa0.8□□□□□ -2.28
HERC4-208ENST00000463478 DNAH5Q8TE73 4624 aa0.8□□□□□ -2.28
HERC4-208ENST00000463478 LINC00959A0A1B0GUT2 108 aa0.79□□□□□ -2.28
HERC4-208ENST00000463478 DEFB107AQ8IZN7 70 aa0.79□□□□□ -2.28
HERC4-208ENST00000463478 USMG5Q96IX5 58 aa0.79□□□□□ -2.28
HERC4-208ENST00000463478 PDCD11Q14690 1871 aaKnown RBP0.79□□□□□ -2.28
HERC4-208ENST00000463478 LAMC1P11047 1609 aa0.78□□□□□ -2.28
HERC4-208ENST00000463478 LTN1O94822 1766 aa0.78□□□□□ -2.28
HERC4-208ENST00000463478 PLGLAQ15195 96 aa0.78□□□□□ -2.28
HERC4-208ENST00000463478 DNAH10Q8IVF4 4471 aa0.78□□□□□ -2.28
HERC4-208ENST00000463478 NEXMIFQ5QGS0 1516 aa0.78□□□□□ -2.28
HERC4-208ENST00000463478 ASXL1Q8IXJ9 1541 aa0.78□□□□□ -2.28
HERC4-208ENST00000463478 MYO3AQ8NEV4 1616 aa0.78□□□□□ -2.29
HERC4-208ENST00000463478 XRN1Q8IZH2 1706 aaKnown RBP0.78□□□□□ -2.29
HERC4-208ENST00000463478 PLXNB2O15031 1838 aa0.78□□□□□ -2.29
HERC4-208ENST00000463478 SAMD9Q5K651 1589 aa0.77□□□□□ -2.29
HERC4-208ENST00000463478 ABCA6Q8N139 1617 aa0.77□□□□□ -2.29
HERC4-208ENST00000463478 SCN11AQ9UI33 1791 aa0.77□□□□□ -2.29
HERC4-208ENST00000463478 PLCH1Q4KWH8 1693 aa0.76□□□□□ -2.29
HERC4-208ENST00000463478 ARHGAP35Q9NRY4 1499 aa0.76□□□□□ -2.29
HERC4-208ENST00000463478 MYMXA0A1B0GTQ4 84 aa0.76□□□□□ -2.29
HERC4-208ENST00000463478 PRH1P02810 166 aa0.76□□□□□ -2.29
HERC4-208ENST00000463478 IGLC3P0DOY3 106 aa0.76□□□□□ -2.29
HERC4-208ENST00000463478 ADIRFQ15847 76 aa0.76□□□□□ -2.29
HERC4-208ENST00000463478 TDRG1Q3Y452 100 aa0.76□□□□□ -2.29
HERC4-208ENST00000463478 Q5VSD8 79 aa0.76□□□□□ -2.29
HERC4-208ENST00000463478 BTAF1O14981 1849 aa0.75□□□□□ -2.29
HERC4-208ENST00000463478 COX6B1P14854 86 aa0.75□□□□□ -2.29
HERC4-208ENST00000463478 Q5BKY6 102 aa0.75□□□□□ -2.29
HERC4-208ENST00000463478 ST20Q9HBF5 79 aa0.75□□□□□ -2.29
HERC4-208ENST00000463478 MON2Q7Z3U7 1717 aa0.75□□□□□ -2.29
HERC4-208ENST00000463478 A0A1B0GUT8 65 aa0.74□□□□□ -2.29
HERC4-208ENST00000463478 IQCF6A8MYZ5 107 aa0.74□□□□□ -2.29
HERC4-208ENST00000463478 COX8AP10176 69 aa0.74□□□□□ -2.29
HERC4-208ENST00000463478 SMR3AQ99954 134 aa0.74□□□□□ -2.29
HERC4-208ENST00000463478 MYO7BQ6PIF6 2116 aa0.74□□□□□ -2.29
HERC4-208ENST00000463478 TIAM1Q13009 1591 aa0.74□□□□□ -2.29
HERC4-208ENST00000463478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.74□□□□□ -2.29
HERC4-208ENST00000463478 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
HERC4-208ENST00000463478 FMN2Q9NZ56 1722 aa0.73□□□□□ -2.29
HERC4-208ENST00000463478 IGLC2P0DOY2 106 aa0.73□□□□□ -2.29
HERC4-208ENST00000463478 WFDC2Q14508 124 aa0.73□□□□□ -2.29
HERC4-208ENST00000463478 GOLGA4Q13439 2230 aaKnown RBP0.73□□□□□ -2.29
HERC4-208ENST00000463478 ATP7BP35670 1465 aa0.73□□□□□ -2.29
HERC4-208ENST00000463478 LY75O60449 1722 aa0.72□□□□□ -2.29
HERC4-208ENST00000463478 CEBPZOSA8MTT3 80 aa0.72□□□□□ -2.29
HERC4-208ENST00000463478 K7EQZ3 153 aa0.71□□□□□ -2.3
HERC4-208ENST00000463478 SPINK1P00995 79 aa0.71□□□□□ -2.3
HERC4-208ENST00000463478 NHSQ6T4R5 1651 aa0.71□□□□□ -2.3
HERC4-208ENST00000463478 PPLO60437 1756 aa0.7□□□□□ -2.3
HERC4-208ENST00000463478 TNXBP22105 4242 aa0.7□□□□□ -2.3
HERC4-208ENST00000463478 KNDC1Q76NI1 1749 aa0.7□□□□□ -2.3
HERC4-208ENST00000463478 NDUFB1O75438 58 aa0.7□□□□□ -2.3
HERC4-208ENST00000463478 CRIPTQ9P021 101 aa0.7□□□□□ -2.3
HERC4-208ENST00000463478 LRRC37AA6NMS7 1700 aa0.69□□□□□ -2.3
HERC4-208ENST00000463478 ITSN1Q15811 1721 aa0.69□□□□□ -2.3
HERC4-208ENST00000463478 FXYD6-FXYD2A0A087WZ82 144 aa0.69□□□□□ -2.3
HERC4-208ENST00000463478 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms