RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 LINC00575Q6W349 94 aa4.81□□□□□ -1.64
TMEM254-208ENST00000463209 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
TMEM254-208ENST00000463209 CFC1P0CG37 223 aa4.8□□□□□ -1.64
TMEM254-208ENST00000463209 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
TMEM254-208ENST00000463209 Q6ZQY7 126 aa4.8□□□□□ -1.64
TMEM254-208ENST00000463209 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
TMEM254-208ENST00000463209 hADV29S1A0JD25 119 aa4.79□□□□□ -1.64
TMEM254-208ENST00000463209 VAMP3Q15836 100 aa4.79□□□□□ -1.64
TMEM254-208ENST00000463209 PYY3Q5JQD4 70 aa4.79□□□□□ -1.64
TMEM254-208ENST00000463209 PRO1933Q9H354 126 aa4.79□□□□□ -1.64
TMEM254-208ENST00000463209 NHP2Q9NX24 153 aaKnown RBP4.79□□□□□ -1.64
TMEM254-208ENST00000463209 RAB37Q96AX2 223 aa4.78□□□□□ -1.64
TMEM254-208ENST00000463209 HIGD1BQ9P298 99 aa4.78□□□□□ -1.64
TMEM254-208ENST00000463209 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
TMEM254-208ENST00000463209 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
TMEM254-208ENST00000463209 K7ERJ3 54 aa4.76□□□□□ -1.65
TMEM254-208ENST00000463209 FXYD2P54710 66 aa4.76□□□□□ -1.65
TMEM254-208ENST00000463209 CEND1Q8N111 149 aa4.76□□□□□ -1.65
TMEM254-208ENST00000463209 FAM218AQ96MZ4 157 aa4.76□□□□□ -1.65
TMEM254-208ENST00000463209 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
TMEM254-208ENST00000463209 A0A0B4J2C4 111 aa4.75□□□□□ -1.65
TMEM254-208ENST00000463209 F8WEM9 126 aa4.75□□□□□ -1.65
TMEM254-208ENST00000463209 H3BUT2 72 aa4.75□□□□□ -1.65
TMEM254-208ENST00000463209 BVES-AS1Q5T3Y7 98 aa4.75□□□□□ -1.65
TMEM254-208ENST00000463209 KRTAP4-1Q9BYQ7 146 aa4.75□□□□□ -1.65
TMEM254-208ENST00000463209 CD164Q04900 197 aa4.74□□□□□ -1.65
TMEM254-208ENST00000463209 C1orf195Q5TG92 126 aa4.73□□□□□ -1.65
TMEM254-208ENST00000463209 IGFL1Q6UW32 110 aa4.73□□□□□ -1.65
TMEM254-208ENST00000463209 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.73□□□□□ -1.65
TMEM254-208ENST00000463209 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
TMEM254-208ENST00000463209 TRIAP1O43715 76 aa4.72□□□□□ -1.65
TMEM254-208ENST00000463209 ASB16-AS1Q495Z4 193 aa4.72□□□□□ -1.65
TMEM254-208ENST00000463209 KRTAP9-2Q9BYQ4 174 aa4.72□□□□□ -1.65
TMEM254-208ENST00000463209 PRO1854Q9UHT4 67 aa4.72□□□□□ -1.65
TMEM254-208ENST00000463209 FAT4Q6V0I7 4981 aa4.71□□□□□ -1.66
TMEM254-208ENST00000463209 A0A1B0GV72 72 aa4.71□□□□□ -1.66
TMEM254-208ENST00000463209 HSD52Q0P140 79 aa4.71□□□□□ -1.66
TMEM254-208ENST00000463209 OCIAD2Q56VL3 154 aa4.71□□□□□ -1.66
TMEM254-208ENST00000463209 CLEC2BQ92478 149 aa4.71□□□□□ -1.66
TMEM254-208ENST00000463209 SNHG12Q9BXW3 62 aa4.71□□□□□ -1.66
TMEM254-208ENST00000463209 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
TMEM254-208ENST00000463209 IGLV8-61A0A075B6I0 122 aa4.69□□□□□ -1.66
TMEM254-208ENST00000463209 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
TMEM254-208ENST00000463209 A0A0U1RQV1 116 aa4.69□□□□□ -1.66
TMEM254-208ENST00000463209 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
TMEM254-208ENST00000463209 Q5XG85 94 aa4.69□□□□□ -1.66
TMEM254-208ENST00000463209 UQCR10Q9UDW1 63 aa4.69□□□□□ -1.66
TMEM254-208ENST00000463209 H0YGX0 51 aa4.68□□□□□ -1.66
TMEM254-208ENST00000463209 FABP2P12104 132 aa4.68□□□□□ -1.66
TMEM254-208ENST00000463209 PSMB2P49721 201 aa4.68□□□□□ -1.66
TMEM254-208ENST00000463209 PCOTHQ58A44 107 aa4.68□□□□□ -1.66
TMEM254-208ENST00000463209 Q6JHZ5 121 aa4.68□□□□□ -1.66
TMEM254-208ENST00000463209 TCL1BO95988 128 aa4.67□□□□□ -1.66
TMEM254-208ENST00000463209 NDUFV3P56181 108 aaKnown RBP4.67□□□□□ -1.66
TMEM254-208ENST00000463209 PPDPFLQ8WWR9 84 aa4.66□□□□□ -1.66
TMEM254-208ENST00000463209 H3BMG7 143 aa4.64□□□□□ -1.67
TMEM254-208ENST00000463209 SNCGO76070 127 aa4.64□□□□□ -1.67
TMEM254-208ENST00000463209 NAA38Q9BRA0 125 aaKnown RBP4.63□□□□□ -1.67
TMEM254-208ENST00000463209 A0A087WSZ3 146 aa4.62□□□□□ -1.67
TMEM254-208ENST00000463209 DNAL4O96015 105 aa4.62□□□□□ -1.67
TMEM254-208ENST00000463209 OBSCN-AS1Q96MR7 158 aa4.62□□□□□ -1.67
TMEM254-208ENST00000463209 A0A1B0GX51 115 aa4.61□□□□□ -1.67
TMEM254-208ENST00000463209 A0A1W2PNM2 257 aa4.61□□□□□ -1.67
TMEM254-208ENST00000463209 C9orf118A6NHY6 69 aa4.61□□□□□ -1.67
TMEM254-208ENST00000463209 LST1O00453 97 aa4.61□□□□□ -1.67
TMEM254-208ENST00000463209 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
TMEM254-208ENST00000463209 ORMDL1Q9P0S3 153 aa4.61□□□□□ -1.67
TMEM254-208ENST00000463209 Q6Q795 121 aa4.6□□□□□ -1.67
TMEM254-208ENST00000463209 TEN1Q86WV5 123 aa4.6□□□□□ -1.67
TMEM254-208ENST00000463209 COX6CP09669 75 aa4.59□□□□□ -1.67
TMEM254-208ENST00000463209 SCGB1C2P0DMR2 95 aa4.59□□□□□ -1.67
TMEM254-208ENST00000463209 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
TMEM254-208ENST00000463209 Q96NJ1 140 aa4.59□□□□□ -1.67
TMEM254-208ENST00000463209 SMIM6P0DI80 62 aa4.58□□□□□ -1.68
TMEM254-208ENST00000463209 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
TMEM254-208ENST00000463209 ANKRD29Q8N6D5 301 aa4.58□□□□□ -1.68
TMEM254-208ENST00000463209 DSCR10P59022 87 aa4.57□□□□□ -1.68
TMEM254-208ENST00000463209 DEFB116Q30KQ4 102 aa4.57□□□□□ -1.68
TMEM254-208ENST00000463209 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
TMEM254-208ENST00000463209 SS18L2Q9UHA2 77 aa4.57□□□□□ -1.68
TMEM254-208ENST00000463209 TRACP01848 142 aa4.56□□□□□ -1.68
TMEM254-208ENST00000463209 BATFQ16520 125 aa4.56□□□□□ -1.68
TMEM254-208ENST00000463209 SIGMAR1Q99720 223 aa4.56□□□□□ -1.68
TMEM254-208ENST00000463209 VPS25Q9BRG1 176 aa4.56□□□□□ -1.68
TMEM254-208ENST00000463209 LOC105371267A0A1B0GV96 52 aa4.55□□□□□ -1.68
TMEM254-208ENST00000463209 TMEM256-PLSCR3K7ERE1 68 aa4.55□□□□□ -1.68
TMEM254-208ENST00000463209 M0R143 59 aa4.55□□□□□ -1.68
TMEM254-208ENST00000463209 CCKP06307 115 aa4.55□□□□□ -1.68
TMEM254-208ENST00000463209 TRBV7-4A0A0J9YYF1 115 aa4.53□□□□□ -1.68
TMEM254-208ENST00000463209 IGKV4-1P06312 121 aa4.53□□□□□ -1.68
TMEM254-208ENST00000463209 BAALC-AS2P0C853 105 aa4.53□□□□□ -1.68
TMEM254-208ENST00000463209 UBE2V1Q13404 147 aa4.53□□□□□ -1.68
TMEM254-208ENST00000463209 MT1HP80294 61 aa4.52□□□□□ -1.69
TMEM254-208ENST00000463209 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
TMEM254-208ENST00000463209 TSTD3H0UI37 97 aa4.51□□□□□ -1.69
TMEM254-208ENST00000463209 H3BQ85 93 aa4.51□□□□□ -1.69
TMEM254-208ENST00000463209 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
TMEM254-208ENST00000463209 ATXN8Q156A1 80 aa4.51□□□□□ -1.69
TMEM254-208ENST00000463209 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
TMEM254-208ENST00000463209 Q75L30 129 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms