RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 Q6ZQY7 126 aa7.27□□□□□ -1.25
HDAC1-203ENST00000463172 PPDPFLQ8WWR9 84 aa7.27□□□□□ -1.25
HDAC1-203ENST00000463172 HIGD1BQ9P298 99 aa7.27□□□□□ -1.25
HDAC1-203ENST00000463172 PAM16Q9Y3D7 125 aa7.27□□□□□ -1.25
HDAC1-203ENST00000463172 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
HDAC1-203ENST00000463172 XP32Q5T750 250 aa7.26□□□□□ -1.25
HDAC1-203ENST00000463172 Q6JHZ5 121 aa7.26□□□□□ -1.25
HDAC1-203ENST00000463172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.26□□□□□ -1.25
HDAC1-203ENST00000463172 C14orf144Q96I85 54 aa7.26□□□□□ -1.25
HDAC1-203ENST00000463172 TMEM238LA0A1B0GVL6 79 aa7.24□□□□□ -1.25
HDAC1-203ENST00000463172 A6NJY4 79 aa7.24□□□□□ -1.25
HDAC1-203ENST00000463172 SNHG12Q9BXW3 62 aa7.24□□□□□ -1.25
HDAC1-203ENST00000463172 H0YGX0 51 aa7.23□□□□□ -1.25
HDAC1-203ENST00000463172 GHRHP01286 108 aa7.23□□□□□ -1.25
HDAC1-203ENST00000463172 OCIAD2Q56VL3 154 aa7.23□□□□□ -1.25
HDAC1-203ENST00000463172 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
HDAC1-203ENST00000463172 CFC1BP0CG36 223 aa7.21□□□□□ -1.26
HDAC1-203ENST00000463172 CFC1P0CG37 223 aa7.21□□□□□ -1.26
HDAC1-203ENST00000463172 CLEC2BQ92478 149 aa7.21□□□□□ -1.26
HDAC1-203ENST00000463172 IGLV8-61A0A075B6I0 122 aa7.2□□□□□ -1.26
HDAC1-203ENST00000463172 C9orf92A6NGG3 77 aa7.2□□□□□ -1.26
HDAC1-203ENST00000463172 C1orf195Q5TG92 126 aa7.2□□□□□ -1.26
HDAC1-203ENST00000463172 CEND1Q8N111 149 aa7.19□□□□□ -1.26
HDAC1-203ENST00000463172 A0A0G2JQZ4 141 aa7.18□□□□□ -1.26
HDAC1-203ENST00000463172 C2orf91Q6ZV80 131 aa7.17□□□□□ -1.26
HDAC1-203ENST00000463172 PRO1854Q9UHT4 67 aa7.17□□□□□ -1.26
HDAC1-203ENST00000463172 TRBV7-7A0A0K0K1E9 115 aa7.16□□□□□ -1.26
HDAC1-203ENST00000463172 A0A1B0GX51 115 aa7.16□□□□□ -1.26
HDAC1-203ENST00000463172 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
HDAC1-203ENST00000463172 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-203ENST00000463172 SS18L2Q9UHA2 77 aa7.13□□□□□ -1.27
HDAC1-203ENST00000463172 HSD52Q0P140 79 aa7.12□□□□□ -1.27
HDAC1-203ENST00000463172 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
HDAC1-203ENST00000463172 H3BQ85 93 aa7.11□□□□□ -1.27
HDAC1-203ENST00000463172 H3BUT2 72 aa7.11□□□□□ -1.27
HDAC1-203ENST00000463172 LST1O00453 97 aa7.11□□□□□ -1.27
HDAC1-203ENST00000463172 DNAL4O96015 105 aa7.11□□□□□ -1.27
HDAC1-203ENST00000463172 COX6CP09669 75 aa7.1□□□□□ -1.27
HDAC1-203ENST00000463172 FABP2P12104 132 aa7.1□□□□□ -1.27
HDAC1-203ENST00000463172 PSMB2P49721 201 aa7.1□□□□□ -1.27
HDAC1-203ENST00000463172 FXYD2P54710 66 aa7.1□□□□□ -1.27
HDAC1-203ENST00000463172 NDUFV3P56181 108 aaKnown RBP7.1□□□□□ -1.27
HDAC1-203ENST00000463172 PYY3Q5JQD4 70 aa7.1□□□□□ -1.27
HDAC1-203ENST00000463172 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
HDAC1-203ENST00000463172 FAM218AQ96MZ4 157 aa7.09□□□□□ -1.27
HDAC1-203ENST00000463172 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
HDAC1-203ENST00000463172 LCE2BO14633 110 aa7.08□□□□□ -1.28
HDAC1-203ENST00000463172 Q6Q795 121 aa7.08□□□□□ -1.28
HDAC1-203ENST00000463172 UQCR10Q9UDW1 63 aa7.08□□□□□ -1.28
HDAC1-203ENST00000463172 TMA7Q9Y2S6 64 aaKnown RBP7.08□□□□□ -1.28
HDAC1-203ENST00000463172 H3BMG7 143 aa7.07□□□□□ -1.28
HDAC1-203ENST00000463172 TRIAP1O43715 76 aa7.07□□□□□ -1.28
HDAC1-203ENST00000463172 RPL37P61927 97 aaKnown RBP7.07□□□□□ -1.28
HDAC1-203ENST00000463172 ORMDL1Q9P0S3 153 aa7.06□□□□□ -1.28
HDAC1-203ENST00000463172 LOC105371267A0A1B0GV96 52 aa7.05□□□□□ -1.28
HDAC1-203ENST00000463172 TMEM256-PLSCR3K7ERE1 68 aa7.03□□□□□ -1.28
HDAC1-203ENST00000463172 A0A087WSZ3 146 aa7.01□□□□□ -1.29
HDAC1-203ENST00000463172 K7ERJ3 54 aa7.01□□□□□ -1.29
HDAC1-203ENST00000463172 ATP11AUNQ6ZP68 121 aa7.01□□□□□ -1.29
HDAC1-203ENST00000463172 ANKRD29Q8N6D5 301 aa7.01□□□□□ -1.29
HDAC1-203ENST00000463172 OBSCN-AS1Q96MR7 158 aa7.01□□□□□ -1.29
HDAC1-203ENST00000463172 SCGB1C2P0DMR2 95 aa6.99□□□□□ -1.29
HDAC1-203ENST00000463172 Q75L30 129 aa6.98□□□□□ -1.29
HDAC1-203ENST00000463172 TRBV7-4A0A0J9YYF1 115 aa6.97□□□□□ -1.29
HDAC1-203ENST00000463172 Q96NJ1 140 aa6.97□□□□□ -1.29
HDAC1-203ENST00000463172 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
HDAC1-203ENST00000463172 TRACP01848 142 aa6.96□□□□□ -1.3
HDAC1-203ENST00000463172 UBE2V1Q13404 147 aa6.96□□□□□ -1.3
HDAC1-203ENST00000463172 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
HDAC1-203ENST00000463172 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
HDAC1-203ENST00000463172 A0A1B0GV72 72 aa6.94□□□□□ -1.3
HDAC1-203ENST00000463172 A0A1W2PNM2 257 aa6.94□□□□□ -1.3
HDAC1-203ENST00000463172 M0R143 59 aa6.94□□□□□ -1.3
HDAC1-203ENST00000463172 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-203ENST00000463172 CCKP06307 115 aa6.93□□□□□ -1.3
HDAC1-203ENST00000463172 IGKV4-1P06312 121 aa6.91□□□□□ -1.3
HDAC1-203ENST00000463172 RBM3P98179 157 aaKnown RBP6.91□□□□□ -1.3
HDAC1-203ENST00000463172 C21orf62-AS1Q17RA5 79 aa6.91□□□□□ -1.3
HDAC1-203ENST00000463172 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
HDAC1-203ENST00000463172 DSCR8Q96T75 97 aa6.91□□□□□ -1.3
HDAC1-203ENST00000463172 LINC00313P59037 77 aa6.89□□□□□ -1.31
HDAC1-203ENST00000463172 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
HDAC1-203ENST00000463172 C20orf166-AS1Q96NR2 134 aa6.89□□□□□ -1.31
HDAC1-203ENST00000463172 MT1HP80294 61 aa6.88□□□□□ -1.31
HDAC1-203ENST00000463172 VPS25Q9BRG1 176 aa6.88□□□□□ -1.31
HDAC1-203ENST00000463172 A8MUU9 505 aa6.87□□□□□ -1.31
HDAC1-203ENST00000463172 M0R2T5 61 aa6.87□□□□□ -1.31
HDAC1-203ENST00000463172 BAALC-AS2P0C853 105 aa6.87□□□□□ -1.31
HDAC1-203ENST00000463172 SMIM6P0DI80 62 aa6.87□□□□□ -1.31
HDAC1-203ENST00000463172 DSCR10P59022 87 aa6.87□□□□□ -1.31
HDAC1-203ENST00000463172 C9JAW5 83 aa6.86□□□□□ -1.31
HDAC1-203ENST00000463172 ATXN8Q156A1 80 aa6.86□□□□□ -1.31
HDAC1-203ENST00000463172 LYRM7Q5U5X0 104 aa6.85□□□□□ -1.31
HDAC1-203ENST00000463172 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.31
HDAC1-203ENST00000463172 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
HDAC1-203ENST00000463172 TSTD3H0UI37 97 aa6.83□□□□□ -1.32
HDAC1-203ENST00000463172 JMJD7-PLA2G4BH0Y9G9 81 aa6.83□□□□□ -1.32
HDAC1-203ENST00000463172 J3KT08 172 aa6.82□□□□□ -1.32
HDAC1-203ENST00000463172 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
HDAC1-203ENST00000463172 C8orf87E5RJ46 101 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms