RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 KRTAP4-12Q9BQ66 201 aa6.62□□□□□ -1.35
SSBP1-202ENST00000461433 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-202ENST00000461433 IGLV5-48A0A075B6I7 105 aa6.61□□□□□ -1.35
SSBP1-202ENST00000461433 SLC25A20O43772 301 aa6.61□□□□□ -1.35
SSBP1-202ENST00000461433 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
SSBP1-202ENST00000461433 DEFB105AQ8NG35 78 aa6.6□□□□□ -1.35
SSBP1-202ENST00000461433 TEX49A0A1B0GTD5 131 aa6.59□□□□□ -1.35
SSBP1-202ENST00000461433 PSMB2P49721 201 aa6.59□□□□□ -1.35
SSBP1-202ENST00000461433 BATFQ16520 125 aa6.59□□□□□ -1.35
SSBP1-202ENST00000461433 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
SSBP1-202ENST00000461433 Q6ZQY7 126 aa6.59□□□□□ -1.35
SSBP1-202ENST00000461433 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
SSBP1-202ENST00000461433 Q8N377 158 aa6.59□□□□□ -1.35
SSBP1-202ENST00000461433 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
SSBP1-202ENST00000461433 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-202ENST00000461433 HERC1Q15751 4861 aa6.57□□□□□ -1.36
SSBP1-202ENST00000461433 IGLV9-49A0A0B4J1Y8 123 aa6.57□□□□□ -1.36
SSBP1-202ENST00000461433 A0A1B0GX51 115 aa6.56□□□□□ -1.36
SSBP1-202ENST00000461433 COX6CP09669 75 aa6.56□□□□□ -1.36
SSBP1-202ENST00000461433 NAA38Q9BRA0 125 aaKnown RBP6.56□□□□□ -1.36
SSBP1-202ENST00000461433 MOBPQ13875 183 aa6.55□□□□□ -1.36
SSBP1-202ENST00000461433 LAMTOR3Q9UHA4 124 aa6.55□□□□□ -1.36
SSBP1-202ENST00000461433 SSBP3-AS1Q7Z2R9 100 aa6.54□□□□□ -1.36
SSBP1-202ENST00000461433 Q8NBF4 154 aa6.54□□□□□ -1.36
SSBP1-202ENST00000461433 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
SSBP1-202ENST00000461433 SNCGO76070 127 aa6.53□□□□□ -1.36
SSBP1-202ENST00000461433 SCGB1C2P0DMR2 95 aa6.53□□□□□ -1.36
SSBP1-202ENST00000461433 LINC00304Q8N9R0 145 aa6.53□□□□□ -1.36
SSBP1-202ENST00000461433 LST1O00453 97 aa6.52□□□□□ -1.37
SSBP1-202ENST00000461433 C9orf153Q5TBE3 101 aa6.52□□□□□ -1.37
SSBP1-202ENST00000461433 PPDPFLQ8WWR9 84 aa6.52□□□□□ -1.37
SSBP1-202ENST00000461433 OCIAD2Q56VL3 154 aa6.52□□□□□ -1.37
SSBP1-202ENST00000461433 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
SSBP1-202ENST00000461433 C9orf118A6NHY6 69 aa6.51□□□□□ -1.37
SSBP1-202ENST00000461433 H3BUT2 72 aa6.51□□□□□ -1.37
SSBP1-202ENST00000461433 TCL1BO95988 128 aa6.5□□□□□ -1.37
SSBP1-202ENST00000461433 TRACP01848 142 aa6.5□□□□□ -1.37
SSBP1-202ENST00000461433 IGLV8-61A0A075B6I0 122 aa6.49□□□□□ -1.37
SSBP1-202ENST00000461433 DNAL4O96015 105 aa6.49□□□□□ -1.37
SSBP1-202ENST00000461433 UBE2V1Q13404 147 aa6.49□□□□□ -1.37
SSBP1-202ENST00000461433 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
SSBP1-202ENST00000461433 A0A0G2JQZ4 141 aa6.48□□□□□ -1.37
SSBP1-202ENST00000461433 ORMDL1Q9P0S3 153 aa6.48□□□□□ -1.37
SSBP1-202ENST00000461433 A0A1W2PPM0 123 aa6.46□□□□□ -1.37
SSBP1-202ENST00000461433 SPINK1P00995 79 aa6.46□□□□□ -1.37
SSBP1-202ENST00000461433 NDUFV3P56181 108 aaKnown RBP6.46□□□□□ -1.37
SSBP1-202ENST00000461433 F8WEM9 126 aa6.45□□□□□ -1.38
SSBP1-202ENST00000461433 GHRHP01286 108 aa6.45□□□□□ -1.38
SSBP1-202ENST00000461433 FABP2P12104 132 aa6.45□□□□□ -1.38
SSBP1-202ENST00000461433 PCP4P48539 62 aa6.45□□□□□ -1.38
SSBP1-202ENST00000461433 ATXN8Q156A1 80 aa6.45□□□□□ -1.38
SSBP1-202ENST00000461433 TRBV20-1A0A075B6N2 111 aa6.44□□□□□ -1.38
SSBP1-202ENST00000461433 H3BQ85 93 aa6.44□□□□□ -1.38
SSBP1-202ENST00000461433 TMEM256-PLSCR3K7ERE1 68 aa6.44□□□□□ -1.38
SSBP1-202ENST00000461433 LYRM7Q5U5X0 104 aa6.44□□□□□ -1.38
SSBP1-202ENST00000461433 IGFL1Q6UW32 110 aa6.44□□□□□ -1.38
SSBP1-202ENST00000461433 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
SSBP1-202ENST00000461433 CD164Q04900 197 aa6.43□□□□□ -1.38
SSBP1-202ENST00000461433 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
SSBP1-202ENST00000461433 BAALC-AS2P0C853 105 aa6.42□□□□□ -1.38
SSBP1-202ENST00000461433 Q6JHZ5 121 aa6.42□□□□□ -1.38
SSBP1-202ENST00000461433 H3BMG7 143 aa6.42□□□□□ -1.38
SSBP1-202ENST00000461433 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
SSBP1-202ENST00000461433 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
SSBP1-202ENST00000461433 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
SSBP1-202ENST00000461433 C9JAW5 83 aa6.39□□□□□ -1.39
SSBP1-202ENST00000461433 ANKRD29Q8N6D5 301 aa6.39□□□□□ -1.39
SSBP1-202ENST00000461433 SPCS1Q9Y6A9 102 aa6.39□□□□□ -1.39
SSBP1-202ENST00000461433 A0A1B0GV72 72 aa6.38□□□□□ -1.39
SSBP1-202ENST00000461433 K7ERU9 68 aa6.38□□□□□ -1.39
SSBP1-202ENST00000461433 GTF2H5Q6ZYL4 71 aa6.38□□□□□ -1.39
SSBP1-202ENST00000461433 Q5XG85 94 aa6.37□□□□□ -1.39
SSBP1-202ENST00000461433 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
SSBP1-202ENST00000461433 PRR4Q16378 134 aa6.36□□□□□ -1.39
SSBP1-202ENST00000461433 Q6Q795 121 aa6.36□□□□□ -1.39
SSBP1-202ENST00000461433 VPS25Q9BRG1 176 aa6.36□□□□□ -1.39
SSBP1-202ENST00000461433 MTURNQ8N3F0 131 aa6.36□□□□□ -1.39
SSBP1-202ENST00000461433 LIMD2Q9BT23 127 aa6.36□□□□□ -1.39
SSBP1-202ENST00000461433 A0A1W2PNM2 257 aa6.35□□□□□ -1.39
SSBP1-202ENST00000461433 TEN1Q86WV5 123 aa6.35□□□□□ -1.39
SSBP1-202ENST00000461433 TRBV7-4A0A0J9YYF1 115 aa6.34□□□□□ -1.39
SSBP1-202ENST00000461433 K7EP34 96 aa6.34□□□□□ -1.39
SSBP1-202ENST00000461433 RBM3P98179 157 aaKnown RBP6.34□□□□□ -1.39
SSBP1-202ENST00000461433 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
SSBP1-202ENST00000461433 H3BT86 120 aa6.33□□□□□ -1.4
SSBP1-202ENST00000461433 OBSCN-AS1Q96MR7 158 aa6.33□□□□□ -1.4
SSBP1-202ENST00000461433 FP248Q71RG6 208 aaPredicted RBP6.33□□□□□ -1.4
SSBP1-202ENST00000461433 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
SSBP1-202ENST00000461433 IGLV7-46A0A075B6I9 117 aa6.32□□□□□ -1.4
SSBP1-202ENST00000461433 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
SSBP1-202ENST00000461433 JMJD7-PLA2G4BH0Y9G9 81 aa6.31□□□□□ -1.4
SSBP1-202ENST00000461433 ASB16-AS1Q495Z4 193 aa6.31□□□□□ -1.4
SSBP1-202ENST00000461433 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
SSBP1-202ENST00000461433 LPAP08519 4548 aa6.31□□□□□ -1.4
SSBP1-202ENST00000461433 CCKP06307 115 aa6.3□□□□□ -1.4
SSBP1-202ENST00000461433 DSCR8Q96T75 97 aa6.3□□□□□ -1.4
SSBP1-202ENST00000461433 A0A087WSZ3 146 aa6.29□□□□□ -1.4
SSBP1-202ENST00000461433 LRP2P98164 4655 aa6.28□□□□□ -1.4
SSBP1-202ENST00000461433 LOC110117498A0A087WWA1 95 aa6.28□□□□□ -1.4
SSBP1-202ENST00000461433 Q6ZQT0 140 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms