RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 F8WEM9 126 aa12.51□□□□□ -0.41
TRAF4-207ENST00000461195 PYY3Q5JQD4 70 aa12.5□□□□□ -0.41
TRAF4-207ENST00000461195 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-207ENST00000461195 CEND1Q8N111 149 aa12.5□□□□□ -0.41
TRAF4-207ENST00000461195 A0A0G2JQZ4 141 aa12.49□□□□□ -0.41
TRAF4-207ENST00000461195 TMA7Q9Y2S6 64 aaKnown RBP12.49□□□□□ -0.41
TRAF4-207ENST00000461195 FAT4Q6V0I7 4981 aa12.47□□□□□ -0.41
TRAF4-207ENST00000461195 TMEM238LA0A1B0GVL6 79 aa12.47□□□□□ -0.41
TRAF4-207ENST00000461195 A6NJY4 79 aa12.47□□□□□ -0.41
TRAF4-207ENST00000461195 Q5XG85 94 aa12.47□□□□□ -0.41
TRAF4-207ENST00000461195 LCE2AQ5TA79 106 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-207ENST00000461195 PPDPFLQ8WWR9 84 aa12.44□□□□□ -0.42
TRAF4-207ENST00000461195 ASB16-AS1Q495Z4 193 aa12.43□□□□□ -0.42
TRAF4-207ENST00000461195 H0YGX0 51 aa12.42□□□□□ -0.42
TRAF4-207ENST00000461195 SNCGO76070 127 aa12.42□□□□□ -0.42
TRAF4-207ENST00000461195 Q6JHZ5 121 aa12.42□□□□□ -0.42
TRAF4-207ENST00000461195 PRO1854Q9UHT4 67 aa12.42□□□□□ -0.42
TRAF4-207ENST00000461195 IGLV8-61A0A075B6I0 122 aa12.41□□□□□ -0.42
TRAF4-207ENST00000461195 FXYD2P54710 66 aa12.41□□□□□ -0.42
TRAF4-207ENST00000461195 SEC61BP60468 96 aaKnown RBP12.4□□□□□ -0.42
TRAF4-207ENST00000461195 OCIAD2Q56VL3 154 aa12.4□□□□□ -0.42
TRAF4-207ENST00000461195 XP32Q5T750 250 aa12.4□□□□□ -0.42
TRAF4-207ENST00000461195 SNHG12Q9BXW3 62 aa12.39□□□□□ -0.43
TRAF4-207ENST00000461195 C1orf195Q5TG92 126 aa12.38□□□□□ -0.43
TRAF4-207ENST00000461195 TCL1BO95988 128 aa12.37□□□□□ -0.43
TRAF4-207ENST00000461195 HSD52Q0P140 79 aa12.37□□□□□ -0.43
TRAF4-207ENST00000461195 CLEC2BQ92478 149 aa12.37□□□□□ -0.43
TRAF4-207ENST00000461195 IGFL1Q6UW32 110 aa12.36□□□□□ -0.43
TRAF4-207ENST00000461195 FAM218AQ96MZ4 157 aa12.36□□□□□ -0.43
TRAF4-207ENST00000461195 KRTAP9-6A0A140TA67 174 aa12.33□□□□□ -0.44
TRAF4-207ENST00000461195 C9orf92A6NGG3 77 aa12.33□□□□□ -0.44
TRAF4-207ENST00000461195 UQCR10Q9UDW1 63 aa12.33□□□□□ -0.44
TRAF4-207ENST00000461195 A0A1B0GX51 115 aa12.32□□□□□ -0.44
TRAF4-207ENST00000461195 TRBV7-7A0A0K0K1E9 115 aa12.3□□□□□ -0.44
TRAF4-207ENST00000461195 TRIAP1O43715 76 aa12.3□□□□□ -0.44
TRAF4-207ENST00000461195 H3BUT2 72 aa12.29□□□□□ -0.44
TRAF4-207ENST00000461195 GHRHP01286 108 aa12.28□□□□□ -0.44
TRAF4-207ENST00000461195 K7ERJ3 54 aa12.26□□□□□ -0.45
TRAF4-207ENST00000461195 NDUFV3P56181 108 aaKnown RBP12.26□□□□□ -0.45
TRAF4-207ENST00000461195 PSMB2P49721 201 aa12.24□□□□□ -0.45
TRAF4-207ENST00000461195 KRTAP4-1Q9BYQ7 146 aa12.24□□□□□ -0.45
TRAF4-207ENST00000461195 FABP2P12104 132 aa12.22□□□□□ -0.45
TRAF4-207ENST00000461195 COX6CP09669 75 aa12.2□□□□□ -0.46
TRAF4-207ENST00000461195 H3BMG7 143 aa12.18□□□□□ -0.46
TRAF4-207ENST00000461195 DNAL4O96015 105 aa12.18□□□□□ -0.46
TRAF4-207ENST00000461195 Q6Q795 121 aa12.18□□□□□ -0.46
TRAF4-207ENST00000461195 PCOTHQ58A44 107 aa12.16□□□□□ -0.46
TRAF4-207ENST00000461195 TEN1Q86WV5 123 aa12.16□□□□□ -0.46
TRAF4-207ENST00000461195 LST1O00453 97 aa12.15□□□□□ -0.46
TRAF4-207ENST00000461195 ORMDL1Q9P0S3 153 aa12.15□□□□□ -0.46
TRAF4-207ENST00000461195 H3BQ85 93 aa12.14□□□□□ -0.47
TRAF4-207ENST00000461195 SS18L2Q9UHA2 77 aa12.14□□□□□ -0.47
TRAF4-207ENST00000461195 TMEM256-PLSCR3K7ERE1 68 aa12.09□□□□□ -0.47
TRAF4-207ENST00000461195 RPL37P61927 97 aaKnown RBP12.09□□□□□ -0.47
TRAF4-207ENST00000461195 A0A087WSZ3 146 aa12.07□□□□□ -0.48
TRAF4-207ENST00000461195 SCGB1C2P0DMR2 95 aa12.07□□□□□ -0.48
TRAF4-207ENST00000461195 SMIM6P0DI80 62 aa12.05□□□□□ -0.48
TRAF4-207ENST00000461195 ANKRD29Q8N6D5 301 aa12.05□□□□□ -0.48
TRAF4-207ENST00000461195 A0A1W2PNM2 257 aa12.04□□□□□ -0.48
TRAF4-207ENST00000461195 TRACP01848 142 aa12.04□□□□□ -0.48
TRAF4-207ENST00000461195 A0A1B0GV72 72 aa12.03□□□□□ -0.48
TRAF4-207ENST00000461195 M0R143 59 aa12.02□□□□□ -0.49
TRAF4-207ENST00000461195 OBSCN-AS1Q96MR7 158 aa12.02□□□□□ -0.49
TRAF4-207ENST00000461195 UBE2V1Q13404 147 aa12.01□□□□□ -0.49
TRAF4-207ENST00000461195 TRBV7-4A0A0J9YYF1 115 aa11.98□□□□□ -0.49
TRAF4-207ENST00000461195 Q96NJ1 140 aa11.97□□□□□ -0.49
TRAF4-207ENST00000461195 Q75L30 129 aa11.94□□□□□ -0.5
TRAF4-207ENST00000461195 CCKP06307 115 aa11.93□□□□□ -0.5
TRAF4-207ENST00000461195 LCE2DQ5TA82 110 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-207ENST00000461195 BAALC-AS2P0C853 105 aa11.9□□□□□ -0.5
TRAF4-207ENST00000461195 RBM3P98179 157 aaKnown RBP11.9□□□□□ -0.5
TRAF4-207ENST00000461195 KRTAP19-2Q3LHN2 52 aa11.9□□□□□ -0.5
TRAF4-207ENST00000461195 LCE2CQ5TA81 110 aa11.9□□□□□ -0.5
TRAF4-207ENST00000461195 TSTD3H0UI37 97 aa11.89□□□□□ -0.51
TRAF4-207ENST00000461195 ATP11AUNQ6ZP68 121 aa11.89□□□□□ -0.51
TRAF4-207ENST00000461195 SIGMAR1Q99720 223 aa11.89□□□□□ -0.51
TRAF4-207ENST00000461195 NAA38Q9BRA0 125 aaKnown RBP11.89□□□□□ -0.51
TRAF4-207ENST00000461195 ATXN8Q156A1 80 aa11.87□□□□□ -0.51
TRAF4-207ENST00000461195 DSCR8Q96T75 97 aa11.87□□□□□ -0.51
TRAF4-207ENST00000461195 IGKV4-1P06312 121 aa11.85□□□□□ -0.51
TRAF4-207ENST00000461195 FSIP2Q5CZC0 6907 aa11.85□□□□□ -0.51
TRAF4-207ENST00000461195 C20orf166-AS1Q96NR2 134 aa11.84□□□□□ -0.51
TRAF4-207ENST00000461195 VPS25Q9BRG1 176 aa11.84□□□□□ -0.51
TRAF4-207ENST00000461195 LOC105371267A0A1B0GV96 52 aa11.83□□□□□ -0.52
TRAF4-207ENST00000461195 CRCT1Q9UGL9 99 aa11.83□□□□□ -0.52
TRAF4-207ENST00000461195 DSCR10P59022 87 aa11.82□□□□□ -0.52
TRAF4-207ENST00000461195 LINC00472Q9H8W2 130 aa11.82□□□□□ -0.52
TRAF4-207ENST00000461195 A8MUU9 505 aa11.8□□□□□ -0.52
TRAF4-207ENST00000461195 C9JAW5 83 aa11.8□□□□□ -0.52
TRAF4-207ENST00000461195 BATFQ16520 125 aa11.79□□□□□ -0.52
TRAF4-207ENST00000461195 DEFB116Q30KQ4 102 aa11.79□□□□□ -0.52
TRAF4-207ENST00000461195 LYRM7Q5U5X0 104 aa11.79□□□□□ -0.52
TRAF4-207ENST00000461195 LINC00313P59037 77 aa11.78□□□□□ -0.52
TRAF4-207ENST00000461195 MT1HP80294 61 aa11.76□□□□□ -0.53
TRAF4-207ENST00000461195 JMJD7-PLA2G4BH0Y9G9 81 aa11.75□□□□□ -0.53
TRAF4-207ENST00000461195 C21orf62-AS1Q17RA5 79 aa11.75□□□□□ -0.53
TRAF4-207ENST00000461195 TRBV20-1A0A075B6N2 111 aa11.73□□□□□ -0.53
TRAF4-207ENST00000461195 COX6B2Q6YFQ2 88 aa11.73□□□□□ -0.53
TRAF4-207ENST00000461195 KRTAP16-1A8MUX0 517 aa11.7□□□□□ -0.54
TRAF4-207ENST00000461195 IGHV6-1A0A0B4J1U7 121 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms