RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 DEFB105AQ8NG35 78 aa8.85□□□□□ -0.99
ERCC3-205ENST00000460485 SPRR1BP22528 89 aa8.84□□□□□ -0.99
ERCC3-205ENST00000460485 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
ERCC3-205ENST00000460485 Q8NBF4 154 aa8.84□□□□□ -0.99
ERCC3-205ENST00000460485 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
ERCC3-205ENST00000460485 UQCRQO14949 82 aa8.82□□□□□ -1
ERCC3-205ENST00000460485 RTL8CO15255 209 aa8.82□□□□□ -1
ERCC3-205ENST00000460485 CHTF8P0CG12 524 aa8.82□□□□□ -1
ERCC3-205ENST00000460485 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
ERCC3-205ENST00000460485 SPRR4Q96PI1 79 aa8.82□□□□□ -1
ERCC3-205ENST00000460485 DNAH11Q96DT5 4516 aa8.82□□□□□ -1
ERCC3-205ENST00000460485 DYNC1H1Q14204 4646 aaKnown RBP8.82□□□□□ -1
ERCC3-205ENST00000460485 M0R2N4 97 aa8.81□□□□□ -1
ERCC3-205ENST00000460485 UBE2AP49459 152 aa8.81□□□□□ -1
ERCC3-205ENST00000460485 HAMPP81172 84 aa8.81□□□□□ -1
ERCC3-205ENST00000460485 NREPQ16612 68 aa8.81□□□□□ -1
ERCC3-205ENST00000460485 DNAH17Q9UFH2 4485 aa8.81□□□□□ -1
ERCC3-205ENST00000460485 ERC2-IT1O76042 136 aa8.8□□□□□ -1
ERCC3-205ENST00000460485 ST20-AS1Q8NBB2 130 aa8.8□□□□□ -1
ERCC3-205ENST00000460485 PKD1P98161 4303 aa8.79□□□□□ -1
ERCC3-205ENST00000460485 PRLHP81277 87 aa8.79□□□□□ -1
ERCC3-205ENST00000460485 HIGD2AQ9BW72 106 aa8.79□□□□□ -1
ERCC3-205ENST00000460485 HSPG2P98160 4391 aa8.79□□□□□ -1
ERCC3-205ENST00000460485 CDK2AP2O75956 126 aa8.78□□□□□ -1
ERCC3-205ENST00000460485 COX7CP15954 63 aa8.78□□□□□ -1
ERCC3-205ENST00000460485 SMIM29Q86T20 159 aa8.78□□□□□ -1
ERCC3-205ENST00000460485 PLAC8Q9NZF1 115 aa8.78□□□□□ -1
ERCC3-205ENST00000460485 HERC1Q15751 4861 aa8.77□□□□□ -1
ERCC3-205ENST00000460485 C3orf22Q8N5N4 141 aa8.77□□□□□ -1.01
ERCC3-205ENST00000460485 SERP2Q8N6R1 65 aa8.77□□□□□ -1.01
ERCC3-205ENST00000460485 DPH3Q96FX2 82 aa8.77□□□□□ -1.01
ERCC3-205ENST00000460485 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
ERCC3-205ENST00000460485 IGLV5-52A0A0A0MRZ9 124 aa8.76□□□□□ -1.01
ERCC3-205ENST00000460485 CRYGAP11844 174 aa8.76□□□□□ -1.01
ERCC3-205ENST00000460485 RPL37AP61513 92 aaKnown RBP8.76□□□□□ -1.01
ERCC3-205ENST00000460485 KRTAP13-1Q8IUC0 172 aa8.76□□□□□ -1.01
ERCC3-205ENST00000460485 A0A087WVE0 104 aa8.74□□□□□ -1.01
ERCC3-205ENST00000460485 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
ERCC3-205ENST00000460485 BPY2O14599 106 aa8.73□□□□□ -1.01
ERCC3-205ENST00000460485 Q8N1X5 172 aa8.73□□□□□ -1.01
ERCC3-205ENST00000460485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-205ENST00000460485 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
ERCC3-205ENST00000460485 PANO1I0J062 215 aa8.7□□□□□ -1.02
ERCC3-205ENST00000460485 C9orf153Q5TBE3 101 aa8.7□□□□□ -1.02
ERCC3-205ENST00000460485 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
ERCC3-205ENST00000460485 KRTAP11-1Q8IUC1 163 aa8.69□□□□□ -1.02
ERCC3-205ENST00000460485 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-205ENST00000460485 TRAV7A0A075B6U4 112 aa8.68□□□□□ -1.02
ERCC3-205ENST00000460485 LINC00483Q53H64 154 aa8.68□□□□□ -1.02
ERCC3-205ENST00000460485 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
ERCC3-205ENST00000460485 ZNF861PO60384 105 aa8.63□□□□□ -1.03
ERCC3-205ENST00000460485 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
ERCC3-205ENST00000460485 SCXQ7RTU7 201 aa8.62□□□□□ -1.03
ERCC3-205ENST00000460485 LRP1BQ9NZR2 4599 aa8.61□□□□□ -1.03
ERCC3-205ENST00000460485 SS18L2Q9UHA2 77 aa8.6□□□□□ -1.03
ERCC3-205ENST00000460485 J3KT08 172 aa8.59□□□□□ -1.03
ERCC3-205ENST00000460485 APOBP04114 4563 aaKnown RBP8.59□□□□□ -1.03
ERCC3-205ENST00000460485 A0A087WSZ3 146 aa8.58□□□□□ -1.04
ERCC3-205ENST00000460485 TMEM258P61165 79 aa8.58□□□□□ -1.04
ERCC3-205ENST00000460485 Q6ZSA8 131 aa8.57□□□□□ -1.04
ERCC3-205ENST00000460485 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
ERCC3-205ENST00000460485 DSCR10P59022 87 aa8.56□□□□□ -1.04
ERCC3-205ENST00000460485 NDUFC1O43677 76 aa8.55□□□□□ -1.04
ERCC3-205ENST00000460485 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
ERCC3-205ENST00000460485 DNAH5Q8TE73 4624 aa8.52□□□□□ -1.05
ERCC3-205ENST00000460485 Q8N9L7 120 aa8.52□□□□□ -1.05
ERCC3-205ENST00000460485 HCG22E2RYF7 251 aa8.51□□□□□ -1.05
ERCC3-205ENST00000460485 OCR1Q9BZK8 76 aa8.51□□□□□ -1.05
ERCC3-205ENST00000460485 K7EQZ3 153 aa8.5□□□□□ -1.05
ERCC3-205ENST00000460485 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
ERCC3-205ENST00000460485 CD164Q04900 197 aa8.5□□□□□ -1.05
ERCC3-205ENST00000460485 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
ERCC3-205ENST00000460485 LINC00472Q9H8W2 130 aa8.5□□□□□ -1.05
ERCC3-205ENST00000460485 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
ERCC3-205ENST00000460485 A8MWP4 228 aa8.49□□□□□ -1.05
ERCC3-205ENST00000460485 C20orf197Q8N268 126 aa8.49□□□□□ -1.05
ERCC3-205ENST00000460485 IGLV9-49A0A0B4J1Y8 123 aa8.48□□□□□ -1.05
ERCC3-205ENST00000460485 NDUFB1O75438 58 aa8.48□□□□□ -1.05
ERCC3-205ENST00000460485 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
ERCC3-205ENST00000460485 ATP5EP56381 51 aaPredicted RBP8.46□□□□□ -1.06
ERCC3-205ENST00000460485 FAM229BQ4G0N7 80 aa8.46□□□□□ -1.06
ERCC3-205ENST00000460485 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
ERCC3-205ENST00000460485 UBR4Q5T4S7 5183 aa8.46□□□□□ -1.06
ERCC3-205ENST00000460485 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
ERCC3-205ENST00000460485 MOBPQ13875 183 aa8.45□□□□□ -1.06
ERCC3-205ENST00000460485 FLG2Q5D862 2391 aaPredicted RBP8.45□□□□□ -1.06
ERCC3-205ENST00000460485 A0A0G2JQZ4 141 aa8.44□□□□□ -1.06
ERCC3-205ENST00000460485 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
ERCC3-205ENST00000460485 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
ERCC3-205ENST00000460485 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
ERCC3-205ENST00000460485 RPS28P62857 69 aaKnown RBP8.42□□□□□ -1.06
ERCC3-205ENST00000460485 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
ERCC3-205ENST00000460485 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
ERCC3-205ENST00000460485 FAM30AQ9NZY2 134 aa8.42□□□□□ -1.06
ERCC3-205ENST00000460485 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.06
ERCC3-205ENST00000460485 A0A0U1RQV1 116 aa8.39□□□□□ -1.07
ERCC3-205ENST00000460485 H3BPC8 53 aa8.39□□□□□ -1.07
ERCC3-205ENST00000460485 H7BZZ5 65 aa8.39□□□□□ -1.07
ERCC3-205ENST00000460485 Q5VSD8 79 aa8.39□□□□□ -1.07
ERCC3-205ENST00000460485 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms