RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
PDE6B-203ENST00000460119 ATOH7Q8N100 152 aa11.18□□□□□ -0.62
PDE6B-203ENST00000460119 COPS9Q8WXC6 57 aa11.18□□□□□ -0.62
PDE6B-203ENST00000460119 KRTAP9-8Q9BYQ0 159 aa11.18□□□□□ -0.62
PDE6B-203ENST00000460119 IGFL1Q6UW32 110 aa11.17□□□□□ -0.62
PDE6B-203ENST00000460119 Q75L30 129 aa11.17□□□□□ -0.62
PDE6B-203ENST00000460119 TRAV13-2A0A0B4J235 113 aa11.16□□□□□ -0.62
PDE6B-203ENST00000460119 LINC00575Q6W349 94 aa11.15□□□□□ -0.62
PDE6B-203ENST00000460119 Q6ZVH6 145 aa11.15□□□□□ -0.62
PDE6B-203ENST00000460119 USH2AO75445 5202 aa11.13□□□□□ -0.63
PDE6B-203ENST00000460119 OCIAD2Q56VL3 154 aa11.13□□□□□ -0.63
PDE6B-203ENST00000460119 Q6ZQY7 126 aa11.13□□□□□ -0.63
PDE6B-203ENST00000460119 SSPOA2VEC9 5147 aa11.13□□□□□ -0.63
PDE6B-203ENST00000460119 Q6JHZ5 121 aa11.12□□□□□ -0.63
PDE6B-203ENST00000460119 CLEC2BQ92478 149 aa11.12□□□□□ -0.63
PDE6B-203ENST00000460119 Q96NJ1 140 aa11.12□□□□□ -0.63
PDE6B-203ENST00000460119 VAMP3Q15836 100 aa11.11□□□□□ -0.63
PDE6B-203ENST00000460119 hADV29S1A0JD25 119 aa11.09□□□□□ -0.63
PDE6B-203ENST00000460119 C20orf202A1L168 122 aa11.07□□□□□ -0.64
PDE6B-203ENST00000460119 CFC1P0CG37 223 aa11.07□□□□□ -0.64
PDE6B-203ENST00000460119 H3BUT2 72 aa11.05□□□□□ -0.64
PDE6B-203ENST00000460119 LST1O00453 97 aa11.04□□□□□ -0.64
PDE6B-203ENST00000460119 COA6Q5JTJ3 125 aaKnown RBP11.02□□□□□ -0.65
PDE6B-203ENST00000460119 C20orf166-AS1Q96NR2 134 aa11□□□□□ -0.65
PDE6B-203ENST00000460119 SNHG12Q9BXW3 62 aa11□□□□□ -0.65
PDE6B-203ENST00000460119 A8MUU9 505 aa10.98□□□□□ -0.65
PDE6B-203ENST00000460119 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.98□□□□□ -0.65
PDE6B-203ENST00000460119 MT2AP02795 61 aa10.97□□□□□ -0.65
PDE6B-203ENST00000460119 TRBV20-1A0A075B6N2 111 aa10.96□□□□□ -0.65
PDE6B-203ENST00000460119 C12orf57Q99622 126 aa10.94□□□□□ -0.66
PDE6B-203ENST00000460119 LCE2BO14633 110 aa10.93□□□□□ -0.66
PDE6B-203ENST00000460119 FCGBPQ9Y6R7 5405 aaPredicted RBP10.93□□□□□ -0.66
PDE6B-203ENST00000460119 KRTAP16-1A8MUX0 517 aa10.92□□□□□ -0.66
PDE6B-203ENST00000460119 KRTAP19-1Q8IUB9 90 aa10.92□□□□□ -0.66
PDE6B-203ENST00000460119 DSCR10P59022 87 aa10.91□□□□□ -0.66
PDE6B-203ENST00000460119 MT1FP04733 61 aa10.89□□□□□ -0.67
PDE6B-203ENST00000460119 PPDPFLQ8WWR9 84 aa10.89□□□□□ -0.67
PDE6B-203ENST00000460119 SNRPEP62304 92 aaKnown RBP10.88□□□□□ -0.67
PDE6B-203ENST00000460119 SCGB1D1O95968 90 aa10.86□□□□□ -0.67
PDE6B-203ENST00000460119 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
PDE6B-203ENST00000460119 A0A087WSZ3 146 aa10.85□□□□□ -0.67
PDE6B-203ENST00000460119 BVES-AS1Q5T3Y7 98 aa10.85□□□□□ -0.67
PDE6B-203ENST00000460119 FAM236DA0A1B0GTK5 79 aa10.84□□□□□ -0.67
PDE6B-203ENST00000460119 FAM236CP0DP71 79 aa10.84□□□□□ -0.67
PDE6B-203ENST00000460119 KRTAP9-3Q9BYQ3 159 aa10.84□□□□□ -0.67
PDE6B-203ENST00000460119 TEN1Q86WV5 123 aa10.83□□□□□ -0.68
PDE6B-203ENST00000460119 NDUFV3P56181 108 aaKnown RBP10.82□□□□□ -0.68
PDE6B-203ENST00000460119 KRTAP10-10P60014 251 aa10.81□□□□□ -0.68
PDE6B-203ENST00000460119 HIST1H4GQ99525 98 aa10.79□□□□□ -0.68
PDE6B-203ENST00000460119 HSBP1L1C9JCN9 74 aa10.78□□□□□ -0.68
PDE6B-203ENST00000460119 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
PDE6B-203ENST00000460119 HRES1P13985 223 aa10.76□□□□□ -0.69
PDE6B-203ENST00000460119 SIGMAR1Q99720 223 aa10.76□□□□□ -0.69
PDE6B-203ENST00000460119 NOTCH2NLQ7Z3S9 236 aa10.75□□□□□ -0.69
PDE6B-203ENST00000460119 MPLKIPQ8TAP9 179 aa10.75□□□□□ -0.69
PDE6B-203ENST00000460119 HIST1H2BLQ99880 126 aa10.75□□□□□ -0.69
PDE6B-203ENST00000460119 H3BMG7 143 aa10.74□□□□□ -0.69
PDE6B-203ENST00000460119 HIST3H2BBQ8N257 126 aa10.74□□□□□ -0.69
PDE6B-203ENST00000460119 A0A1W2PNM2 257 aa10.73□□□□□ -0.69
PDE6B-203ENST00000460119 LINC00313P59037 77 aa10.73□□□□□ -0.69
PDE6B-203ENST00000460119 FABP2P12104 132 aa10.7□□□□□ -0.7
PDE6B-203ENST00000460119 RBM12B-AS1Q9P1G2 102 aa10.7□□□□□ -0.7
PDE6B-203ENST00000460119 IGKV4-1P06312 121 aa10.69□□□□□ -0.7
PDE6B-203ENST00000460119 H0YGX0 51 aa10.68□□□□□ -0.7
PDE6B-203ENST00000460119 S100A2P29034 98 aa10.68□□□□□ -0.7
PDE6B-203ENST00000460119 DEFB116Q30KQ4 102 aa10.68□□□□□ -0.7
PDE6B-203ENST00000460119 SNCGO76070 127 aa10.67□□□□□ -0.7
PDE6B-203ENST00000460119 RAB37Q96AX2 223 aa10.67□□□□□ -0.7
PDE6B-203ENST00000460119 COX8AP10176 69 aa10.65□□□□□ -0.7
PDE6B-203ENST00000460119 MACF1Q9UPN3 7388 aaKnown RBP10.63□□□□□ -0.71
PDE6B-203ENST00000460119 A0A1B0GV72 72 aa10.62□□□□□ -0.71
PDE6B-203ENST00000460119 SYNE2Q8WXH0 6885 aaKnown RBP10.6□□□□□ -0.71
PDE6B-203ENST00000460119 C14orf144Q96I85 54 aa10.59□□□□□ -0.71
PDE6B-203ENST00000460119 IGHV6-1A0A0B4J1U7 121 aa10.58□□□□□ -0.72
PDE6B-203ENST00000460119 A0A0B4J2C4 111 aa10.58□□□□□ -0.72
PDE6B-203ENST00000460119 ANKRD29Q8N6D5 301 aa10.58□□□□□ -0.72
PDE6B-203ENST00000460119 LINC00472Q9H8W2 130 aa10.57□□□□□ -0.72
PDE6B-203ENST00000460119 DLEU1O43261 78 aa10.56□□□□□ -0.72
PDE6B-203ENST00000460119 TRBV7-4A0A0J9YYF1 115 aa10.54□□□□□ -0.72
PDE6B-203ENST00000460119 A0A1B0GX51 115 aa10.54□□□□□ -0.72
PDE6B-203ENST00000460119 KRTAP19-6Q3LI70 58 aa10.54□□□□□ -0.72
PDE6B-203ENST00000460119 GHRHP01286 108 aa10.52□□□□□ -0.73
PDE6B-203ENST00000460119 C2orf91Q6ZV80 131 aa10.5□□□□□ -0.73
PDE6B-203ENST00000460119 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
PDE6B-203ENST00000460119 TRIAP1O43715 76 aa10.49□□□□□ -0.73
PDE6B-203ENST00000460119 HIGD1BQ9P298 99 aa10.49□□□□□ -0.73
PDE6B-203ENST00000460119 S100A6P06703 90 aa10.48□□□□□ -0.73
PDE6B-203ENST00000460119 LINC00846Q9NV44 126 aa10.48□□□□□ -0.73
PDE6B-203ENST00000460119 CCKP06307 115 aa10.46□□□□□ -0.73
PDE6B-203ENST00000460119 SPINK7P58062 85 aa10.46□□□□□ -0.73
PDE6B-203ENST00000460119 CEND1Q8N111 149 aa10.46□□□□□ -0.73
PDE6B-203ENST00000460119 MTURNQ8N3F0 131 aa10.46□□□□□ -0.73
PDE6B-203ENST00000460119 PAM16Q9Y3D7 125 aa10.45□□□□□ -0.74
PDE6B-203ENST00000460119 TRACP01848 142 aa10.44□□□□□ -0.74
PDE6B-203ENST00000460119 FXYD2P54710 66 aa10.43□□□□□ -0.74
PDE6B-203ENST00000460119 SPATA45Q537H7 98 aa10.43□□□□□ -0.74
PDE6B-203ENST00000460119 ZCCHC13Q8WW36 166 aaKnown RBP10.43□□□□□ -0.74
PDE6B-203ENST00000460119 ORMDL1Q9P0S3 153 aa10.43□□□□□ -0.74
PDE6B-203ENST00000460119 A0A1B0GVX0 72 aa10.41□□□□□ -0.74
PDE6B-203ENST00000460119 C8orf87E5RJ46 101 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms