RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 CD164Q04900 197 aa11.51□□□□□ -0.57
SRM-202ENST00000459997 NHP2Q9NX24 153 aaKnown RBP11.51□□□□□ -0.57
SRM-202ENST00000459997 CEND1Q8N111 149 aa11.49□□□□□ -0.57
SRM-202ENST00000459997 RAB37Q96AX2 223 aa11.49□□□□□ -0.57
SRM-202ENST00000459997 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
SRM-202ENST00000459997 hADV29S1A0JD25 119 aa11.46□□□□□ -0.57
SRM-202ENST00000459997 FXYD2P54710 66 aa11.46□□□□□ -0.57
SRM-202ENST00000459997 Q6ZQY7 126 aa11.45□□□□□ -0.58
SRM-202ENST00000459997 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
SRM-202ENST00000459997 C9orf92A6NGG3 77 aa11.44□□□□□ -0.58
SRM-202ENST00000459997 BVES-AS1Q5T3Y7 98 aa11.44□□□□□ -0.58
SRM-202ENST00000459997 KRTAP9-2Q9BYQ4 174 aa11.44□□□□□ -0.58
SRM-202ENST00000459997 Q5XG85 94 aa11.41□□□□□ -0.58
SRM-202ENST00000459997 TMEM238LA0A1B0GVL6 79 aa11.39□□□□□ -0.59
SRM-202ENST00000459997 A6NJY4 79 aa11.39□□□□□ -0.59
SRM-202ENST00000459997 HSD52Q0P140 79 aa11.39□□□□□ -0.59
SRM-202ENST00000459997 PRO1854Q9UHT4 67 aa11.39□□□□□ -0.59
SRM-202ENST00000459997 F8WEM9 126 aa11.37□□□□□ -0.59
SRM-202ENST00000459997 C1orf195Q5TG92 126 aa11.37□□□□□ -0.59
SRM-202ENST00000459997 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.37□□□□□ -0.59
SRM-202ENST00000459997 FAM218AQ96MZ4 157 aa11.37□□□□□ -0.59
SRM-202ENST00000459997 UQCR10Q9UDW1 63 aa11.37□□□□□ -0.59
SRM-202ENST00000459997 PCOTHQ58A44 107 aa11.35□□□□□ -0.59
SRM-202ENST00000459997 K7ERJ3 54 aa11.34□□□□□ -0.59
SRM-202ENST00000459997 H0YGX0 51 aa11.33□□□□□ -0.6
SRM-202ENST00000459997 TRIAP1O43715 76 aa11.31□□□□□ -0.6
SRM-202ENST00000459997 TCL1BO95988 128 aa11.31□□□□□ -0.6
SRM-202ENST00000459997 IGLV8-61A0A075B6I0 122 aa11.3□□□□□ -0.6
SRM-202ENST00000459997 OCIAD2Q56VL3 154 aa11.27□□□□□ -0.61
SRM-202ENST00000459997 Q6JHZ5 121 aa11.27□□□□□ -0.61
SRM-202ENST00000459997 PPDPFLQ8WWR9 84 aa11.27□□□□□ -0.61
SRM-202ENST00000459997 IGFL1Q6UW32 110 aa11.26□□□□□ -0.61
SRM-202ENST00000459997 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
SRM-202ENST00000459997 SNCGO76070 127 aa11.25□□□□□ -0.61
SRM-202ENST00000459997 CLEC2BQ92478 149 aa11.25□□□□□ -0.61
SRM-202ENST00000459997 H3BUT2 72 aa11.24□□□□□ -0.61
SRM-202ENST00000459997 LCE2CQ5TA81 110 aa11.23□□□□□ -0.61
SRM-202ENST00000459997 PSMB2P49721 201 aa11.22□□□□□ -0.61
SRM-202ENST00000459997 TRBV7-7A0A0K0K1E9 115 aa11.21□□□□□ -0.61
SRM-202ENST00000459997 A0A1B0GX51 115 aa11.21□□□□□ -0.61
SRM-202ENST00000459997 SMIM6P0DI80 62 aa11.2□□□□□ -0.62
SRM-202ENST00000459997 RPL37P61927 97 aaKnown RBP11.2□□□□□ -0.62
SRM-202ENST00000459997 KRTAP19-2Q3LHN2 52 aa11.2□□□□□ -0.62
SRM-202ENST00000459997 NDUFV3P56181 108 aaKnown RBP11.18□□□□□ -0.62
SRM-202ENST00000459997 FABP2P12104 132 aa11.16□□□□□ -0.62
SRM-202ENST00000459997 LOC105371267A0A1B0GV96 52 aa11.14□□□□□ -0.63
SRM-202ENST00000459997 COX6CP09669 75 aa11.14□□□□□ -0.63
SRM-202ENST00000459997 H3BMG7 143 aa11.11□□□□□ -0.63
SRM-202ENST00000459997 DNAL4O96015 105 aa11.11□□□□□ -0.63
SRM-202ENST00000459997 MT1HP80294 61 aa11.11□□□□□ -0.63
SRM-202ENST00000459997 GHRHP01286 108 aa11.09□□□□□ -0.63
SRM-202ENST00000459997 ORMDL1Q9P0S3 153 aa11.09□□□□□ -0.63
SRM-202ENST00000459997 KRTAP9-6A0A140TA67 174 aa11.08□□□□□ -0.64
SRM-202ENST00000459997 M0R143 59 aa11.08□□□□□ -0.64
SRM-202ENST00000459997 LST1O00453 97 aa11.07□□□□□ -0.64
SRM-202ENST00000459997 SCGB1C2P0DMR2 95 aa11.07□□□□□ -0.64
SRM-202ENST00000459997 OBSCN-AS1Q96MR7 158 aa11.07□□□□□ -0.64
SRM-202ENST00000459997 A0A1B0GV72 72 aa11.06□□□□□ -0.64
SRM-202ENST00000459997 Q6Q795 121 aa11.05□□□□□ -0.64
SRM-202ENST00000459997 LCE2DQ5TA82 110 aaPredicted RBP11.04□□□□□ -0.64
SRM-202ENST00000459997 TEN1Q86WV5 123 aa11.04□□□□□ -0.64
SRM-202ENST00000459997 NAA38Q9BRA0 125 aaKnown RBP11.04□□□□□ -0.64
SRM-202ENST00000459997 TRACP01848 142 aa11.03□□□□□ -0.64
SRM-202ENST00000459997 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
SRM-202ENST00000459997 TSTD3H0UI37 97 aa11.02□□□□□ -0.65
SRM-202ENST00000459997 A0A1W2PNM2 257 aa11.01□□□□□ -0.65
SRM-202ENST00000459997 TMEM256-PLSCR3K7ERE1 68 aa11.01□□□□□ -0.65
SRM-202ENST00000459997 H3BQ85 93 aa11□□□□□ -0.65
SRM-202ENST00000459997 COX6B2Q6YFQ2 88 aa11□□□□□ -0.65
SRM-202ENST00000459997 A0A087WSZ3 146 aa10.99□□□□□ -0.65
SRM-202ENST00000459997 Q75L30 129 aa10.99□□□□□ -0.65
SRM-202ENST00000459997 ATP11AUNQ6ZP68 121 aa10.98□□□□□ -0.65
SRM-202ENST00000459997 ANKRD29Q8N6D5 301 aa10.97□□□□□ -0.65
SRM-202ENST00000459997 UBE2V1Q13404 147 aa10.96□□□□□ -0.65
SRM-202ENST00000459997 BATFQ16520 125 aa10.96□□□□□ -0.65
SRM-202ENST00000459997 Q96NJ1 140 aa10.95□□□□□ -0.66
SRM-202ENST00000459997 M0R2T5 61 aa10.93□□□□□ -0.66
SRM-202ENST00000459997 BAALC-AS2P0C853 105 aa10.92□□□□□ -0.66
SRM-202ENST00000459997 TRBV7-4A0A0J9YYF1 115 aa10.9□□□□□ -0.66
SRM-202ENST00000459997 LORP23490 312 aaPredicted RBP10.9□□□□□ -0.66
SRM-202ENST00000459997 KRTAP10-6P60371 365 aaPredicted RBP10.9□□□□□ -0.66
SRM-202ENST00000459997 CCKP06307 115 aa10.89□□□□□ -0.67
SRM-202ENST00000459997 ATXN8Q156A1 80 aa10.89□□□□□ -0.67
SRM-202ENST00000459997 RBM3P98179 157 aaKnown RBP10.86□□□□□ -0.67
SRM-202ENST00000459997 C20orf166-AS1Q96NR2 134 aa10.86□□□□□ -0.67
SRM-202ENST00000459997 FSIP2Q5CZC0 6907 aa10.84□□□□□ -0.67
SRM-202ENST00000459997 SIGMAR1Q99720 223 aa10.84□□□□□ -0.67
SRM-202ENST00000459997 A8MUU9 505 aa10.83□□□□□ -0.68
SRM-202ENST00000459997 VPS25Q9BRG1 176 aa10.83□□□□□ -0.68
SRM-202ENST00000459997 FLGP20930 4061 aaPredicted RBP10.83□□□□□ -0.68
SRM-202ENST00000459997 DSCR10P59022 87 aa10.82□□□□□ -0.68
SRM-202ENST00000459997 DSCR8Q96T75 97 aa10.81□□□□□ -0.68
SRM-202ENST00000459997 TAX1BP3O14907 124 aa10.8□□□□□ -0.68
SRM-202ENST00000459997 CRCT1Q9UGL9 99 aa10.8□□□□□ -0.68
SRM-202ENST00000459997 DEFB116Q30KQ4 102 aa10.79□□□□□ -0.68
SRM-202ENST00000459997 LYRM7Q5U5X0 104 aa10.79□□□□□ -0.68
SRM-202ENST00000459997 C9orf118A6NHY6 69 aa10.78□□□□□ -0.68
SRM-202ENST00000459997 IGKV4-1P06312 121 aa10.78□□□□□ -0.68
SRM-202ENST00000459997 TRBV20-1A0A075B6N2 111 aa10.77□□□□□ -0.69
SRM-202ENST00000459997 C9JAW5 83 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms