RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 KRTAP1-5Q9BYS1 174 aa6.91□□□□□ -1.3
RFX3-211ENST00000458034 LINC00474Q9P2X8 69 aa6.91□□□□□ -1.3
RFX3-211ENST00000458034 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.3
RFX3-211ENST00000458034 UBE2AP49459 152 aa6.9□□□□□ -1.3
RFX3-211ENST00000458034 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
RFX3-211ENST00000458034 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
RFX3-211ENST00000458034 NUPR2A6NF83 97 aa6.89□□□□□ -1.31
RFX3-211ENST00000458034 PRLHP81277 87 aa6.89□□□□□ -1.31
RFX3-211ENST00000458034 HIGD2AQ9BW72 106 aa6.89□□□□□ -1.31
RFX3-211ENST00000458034 SPRR1BP22528 89 aa6.88□□□□□ -1.31
RFX3-211ENST00000458034 IGFL1Q6UW32 110 aa6.88□□□□□ -1.31
RFX3-211ENST00000458034 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
RFX3-211ENST00000458034 OXTP01178 125 aa6.87□□□□□ -1.31
RFX3-211ENST00000458034 C9orf163Q8N9P6 203 aa6.87□□□□□ -1.31
RFX3-211ENST00000458034 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
RFX3-211ENST00000458034 STAB1Q9NY15 2570 aa6.87□□□□□ -1.31
RFX3-211ENST00000458034 ANK2Q01484 3957 aa6.86□□□□□ -1.31
RFX3-211ENST00000458034 NBDYA0A0U1RRE5 68 aa6.86□□□□□ -1.31
RFX3-211ENST00000458034 DSCR10P59022 87 aa6.86□□□□□ -1.31
RFX3-211ENST00000458034 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
RFX3-211ENST00000458034 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
RFX3-211ENST00000458034 MAST4O15021 2626 aa6.86□□□□□ -1.31
RFX3-211ENST00000458034 HCG22E2RYF7 251 aa6.85□□□□□ -1.31
RFX3-211ENST00000458034 C5orf47Q569G3 176 aa6.85□□□□□ -1.31
RFX3-211ENST00000458034 FAM30AQ9NZY2 134 aa6.85□□□□□ -1.31
RFX3-211ENST00000458034 BAHCC1Q9P281 2608 aa6.84□□□□□ -1.31
RFX3-211ENST00000458034 K7EQZ3 153 aa6.84□□□□□ -1.31
RFX3-211ENST00000458034 FLNBO75369 2602 aaKnown RBP6.84□□□□□ -1.31
RFX3-211ENST00000458034 PKD1L1Q8TDX9 2849 aa6.84□□□□□ -1.31
RFX3-211ENST00000458034 SMIM26A0A096LP01 95 aa6.83□□□□□ -1.32
RFX3-211ENST00000458034 LCE6AA0A183 80 aa6.83□□□□□ -1.32
RFX3-211ENST00000458034 LRCOL1A6NCL2 159 aa6.83□□□□□ -1.32
RFX3-211ENST00000458034 A0A087WSZ3 146 aa6.82□□□□□ -1.32
RFX3-211ENST00000458034 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
RFX3-211ENST00000458034 FBN1P35555 2871 aaKnown RBP6.81□□□□□ -1.32
RFX3-211ENST00000458034 Q5XG85 94 aa6.8□□□□□ -1.32
RFX3-211ENST00000458034 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
RFX3-211ENST00000458034 Q6ZRN7 208 aaPredicted RBP6.78□□□□□ -1.32
RFX3-211ENST00000458034 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
RFX3-211ENST00000458034 ZNF706Q9Y5V0 76 aaPredicted RBP6.77□□□□□ -1.33
RFX3-211ENST00000458034 DYNC2H1Q8NCM8 4307 aaKnown RBP6.77□□□□□ -1.33
RFX3-211ENST00000458034 NOTCH1P46531 2555 aa6.76□□□□□ -1.33
RFX3-211ENST00000458034 A0A0G2JQZ4 141 aa6.76□□□□□ -1.33
RFX3-211ENST00000458034 MP68P56378 58 aa6.76□□□□□ -1.33
RFX3-211ENST00000458034 RPL37AP61513 92 aaKnown RBP6.76□□□□□ -1.33
RFX3-211ENST00000458034 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
RFX3-211ENST00000458034 NDUFB1O75438 58 aa6.75□□□□□ -1.33
RFX3-211ENST00000458034 C4orf26Q17RF5 130 aa6.75□□□□□ -1.33
RFX3-211ENST00000458034 KRTAP13-1Q8IUC0 172 aa6.75□□□□□ -1.33
RFX3-211ENST00000458034 ZCCHC13Q8WW36 166 aaKnown RBP6.75□□□□□ -1.33
RFX3-211ENST00000458034 A8MWP4 228 aa6.74□□□□□ -1.33
RFX3-211ENST00000458034 H3BPC8 53 aa6.74□□□□□ -1.33
RFX3-211ENST00000458034 WFDC13Q8IUB5 93 aa6.74□□□□□ -1.33
RFX3-211ENST00000458034 PRR15Q8IV56 129 aa6.74□□□□□ -1.33
RFX3-211ENST00000458034 DEFB116Q30KQ4 102 aa6.73□□□□□ -1.33
RFX3-211ENST00000458034 HRCT1Q6UXD1 115 aa6.73□□□□□ -1.33
RFX3-211ENST00000458034 CASC2Q6XLA1 102 aa6.73□□□□□ -1.33
RFX3-211ENST00000458034 DNAH9Q9NYC9 4486 aa6.73□□□□□ -1.33
RFX3-211ENST00000458034 A0A087WTM6 91 aa6.72□□□□□ -1.33
RFX3-211ENST00000458034 LINC00472Q9H8W2 130 aa6.72□□□□□ -1.33
RFX3-211ENST00000458034 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.34
RFX3-211ENST00000458034 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
RFX3-211ENST00000458034 COL6A5A8TX70 2615 aa6.71□□□□□ -1.34
RFX3-211ENST00000458034 LINC00483Q53H64 154 aa6.7□□□□□ -1.34
RFX3-211ENST00000458034 NBEAL1Q6ZS30 2694 aa6.7□□□□□ -1.34
RFX3-211ENST00000458034 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
RFX3-211ENST00000458034 PANO1I0J062 215 aa6.69□□□□□ -1.34
RFX3-211ENST00000458034 RTL8CO15255 209 aa6.69□□□□□ -1.34
RFX3-211ENST00000458034 FP248Q71RG6 208 aaPredicted RBP6.69□□□□□ -1.34
RFX3-211ENST00000458034 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.69□□□□□ -1.34
RFX3-211ENST00000458034 CYP4F30PQ9H0H9 118 aa6.68□□□□□ -1.34
RFX3-211ENST00000458034 IGLV9-49A0A0B4J1Y8 123 aa6.67□□□□□ -1.34
RFX3-211ENST00000458034 H0Y9P7 68 aa6.67□□□□□ -1.34
RFX3-211ENST00000458034 TRAV22A0A0B4J277 110 aa6.66□□□□□ -1.34
RFX3-211ENST00000458034 MOBPQ13875 183 aa6.66□□□□□ -1.34
RFX3-211ENST00000458034 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
RFX3-211ENST00000458034 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.34
RFX3-211ENST00000458034 Q6ZR54 194 aa6.65□□□□□ -1.34
RFX3-211ENST00000458034 LINC00208Q96KT6 92 aa6.65□□□□□ -1.34
RFX3-211ENST00000458034 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
RFX3-211ENST00000458034 MMP24-AS1A0A0U1RRL7 71 aa6.64□□□□□ -1.35
RFX3-211ENST00000458034 CDK2AP2O75956 126 aa6.64□□□□□ -1.35
RFX3-211ENST00000458034 SPANXA2-OT1Q8N9U9 137 aa6.64□□□□□ -1.35
RFX3-211ENST00000458034 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
RFX3-211ENST00000458034 ZNF861PO60384 105 aa6.63□□□□□ -1.35
RFX3-211ENST00000458034 FAM229BQ4G0N7 80 aa6.63□□□□□ -1.35
RFX3-211ENST00000458034 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
RFX3-211ENST00000458034 PSORS1C2Q9UIG4 136 aa6.63□□□□□ -1.35
RFX3-211ENST00000458034 MGAM2Q2M2H8 2515 aa6.62□□□□□ -1.35
RFX3-211ENST00000458034 C1orf134Q5TEV5 83 aa6.62□□□□□ -1.35
RFX3-211ENST00000458034 C1orf64Q8NEQ6 169 aa6.62□□□□□ -1.35
RFX3-211ENST00000458034 STAB2Q8WWQ8 2551 aa6.61□□□□□ -1.35
RFX3-211ENST00000458034 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
RFX3-211ENST00000458034 Q96NJ1 140 aa6.6□□□□□ -1.35
RFX3-211ENST00000458034 WWC2-AS2Q96NR7 200 aa6.6□□□□□ -1.35
RFX3-211ENST00000458034 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
RFX3-211ENST00000458034 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
RFX3-211ENST00000458034 VPS13DQ5THJ4 4388 aa6.58□□□□□ -1.36
RFX3-211ENST00000458034 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
RFX3-211ENST00000458034 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms