RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 SPTBN1Q01082 2364 aaKnown RBP1.42□□□□□ -2.18
HMGB3P30-201ENST00000457863 IGLV5-48A0A075B6I7 105 aa1.4□□□□□ -2.19
HMGB3P30-201ENST00000457863 RPL39P62891 51 aaKnown RBP1.4□□□□□ -2.19
HMGB3P30-201ENST00000457863 WT1-ASQ06250 92 aa1.4□□□□□ -2.19
HMGB3P30-201ENST00000457863 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
HMGB3P30-201ENST00000457863 RPL39LQ96EH5 51 aaKnown RBP1.4□□□□□ -2.19
HMGB3P30-201ENST00000457863 PCNX1Q96RV3 2341 aa1.4□□□□□ -2.19
HMGB3P30-201ENST00000457863 MUC6Q6W4X9 2439 aa1.39□□□□□ -2.19
HMGB3P30-201ENST00000457863 PRCDQ00LT1 54 aa1.39□□□□□ -2.19
HMGB3P30-201ENST00000457863 KAAG1Q9UBP8 84 aa1.39□□□□□ -2.19
HMGB3P30-201ENST00000457863 GVINP1Q7Z2Y8 2422 aa1.39□□□□□ -2.19
HMGB3P30-201ENST00000457863 KLK9Q2XQG4 91 aa1.38□□□□□ -2.19
HMGB3P30-201ENST00000457863 LEAP2Q969E1 77 aa1.38□□□□□ -2.19
HMGB3P30-201ENST00000457863 POLR2KP53803 58 aaKnown RBP1.37□□□□□ -2.19
HMGB3P30-201ENST00000457863 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P30-201ENST00000457863 TOMM7Q9P0U1 55 aa1.37□□□□□ -2.19
HMGB3P30-201ENST00000457863 CSPG4Q6UVK1 2322 aa1.37□□□□□ -2.19
HMGB3P30-201ENST00000457863 MMP24-AS1A0A0U1RRL7 71 aa1.36□□□□□ -2.19
HMGB3P30-201ENST00000457863 ASH1LQ9NR48 2969 aaKnown RBP1.36□□□□□ -2.19
HMGB3P30-201ENST00000457863 H3BUA1 57 aa1.35□□□□□ -2.19
HMGB3P30-201ENST00000457863 STATHP02808 62 aa1.35□□□□□ -2.19
HMGB3P30-201ENST00000457863 DEFB131AP59861 70 aa1.35□□□□□ -2.19
HMGB3P30-201ENST00000457863 TTC28Q96AY4 2481 aa1.35□□□□□ -2.19
HMGB3P30-201ENST00000457863 F8P00451 2351 aa1.34□□□□□ -2.19
HMGB3P30-201ENST00000457863 POLQO75417 2590 aa1.34□□□□□ -2.2
HMGB3P30-201ENST00000457863 ABCA12Q86UK0 2595 aa1.34□□□□□ -2.2
HMGB3P30-201ENST00000457863 ABCA2Q9BZC7 2435 aa1.34□□□□□ -2.2
HMGB3P30-201ENST00000457863 MEGF8Q7Z7M0 2845 aa1.33□□□□□ -2.2
HMGB3P30-201ENST00000457863 CD52P31358 61 aa1.33□□□□□ -2.2
HMGB3P30-201ENST00000457863 KRTAP12-3P60328 96 aa1.33□□□□□ -2.2
HMGB3P30-201ENST00000457863 KRTAP21-3Q3LHN1 58 aa1.33□□□□□ -2.2
HMGB3P30-201ENST00000457863 COX14Q96I36 57 aa1.33□□□□□ -2.2
HMGB3P30-201ENST00000457863 H0YGG7 62 aa1.32□□□□□ -2.2
HMGB3P30-201ENST00000457863 PRLHP81277 87 aa1.32□□□□□ -2.2
HMGB3P30-201ENST00000457863 Q9Y3F1 56 aa1.32□□□□□ -2.2
HMGB3P30-201ENST00000457863 S4R3F8 94 aa1.32□□□□□ -2.2
HMGB3P30-201ENST00000457863 REV3LO60673 3130 aa1.31□□□□□ -2.2
HMGB3P30-201ENST00000457863 ZNF292O60281 2723 aa1.3□□□□□ -2.2
HMGB3P30-201ENST00000457863 M0QY20 66 aa1.3□□□□□ -2.2
HMGB3P30-201ENST00000457863 TMEM167AQ8TBQ9 72 aa1.29□□□□□ -2.2
HMGB3P30-201ENST00000457863 DEFB104AQ8WTQ1 72 aa1.29□□□□□ -2.2
HMGB3P30-201ENST00000457863 DSPP15924 2871 aaKnown RBP1.28□□□□□ -2.2
HMGB3P30-201ENST00000457863 DEFB108AA8MXU0 73 aa1.27□□□□□ -2.21
HMGB3P30-201ENST00000457863 DEFB110Q30KQ9 67 aa1.27□□□□□ -2.21
HMGB3P30-201ENST00000457863 RPL39P5Q59GN2 51 aa1.27□□□□□ -2.21
HMGB3P30-201ENST00000457863 SPINK1P00995 79 aa1.26□□□□□ -2.21
HMGB3P30-201ENST00000457863 DEFB109BQ30KR1 87 aa1.26□□□□□ -2.21
HMGB3P30-201ENST00000457863 NOP10Q9NPE3 64 aaKnown RBP1.26□□□□□ -2.21
HMGB3P30-201ENST00000457863 CEP290O15078 2479 aa1.25□□□□□ -2.21
HMGB3P30-201ENST00000457863 A8MTW9 85 aa1.24□□□□□ -2.21
HMGB3P30-201ENST00000457863 K7EIM0 57 aa1.23□□□□□ -2.21
HMGB3P30-201ENST00000457863 CLPSL2Q6UWE3 100 aa1.22□□□□□ -2.21
HMGB3P30-201ENST00000457863 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
HMGB3P30-201ENST00000457863 HELZ2Q9BYK8 2649 aaKnown RBP1.21□□□□□ -2.22
HMGB3P30-201ENST00000457863 AKAP6Q13023 2319 aa1.21□□□□□ -2.22
HMGB3P30-201ENST00000457863 TRANK1O15050 2925 aa1.21□□□□□ -2.22
HMGB3P30-201ENST00000457863 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
HMGB3P30-201ENST00000457863 CELSR2Q9HCU4 2923 aa1.19□□□□□ -2.22
HMGB3P30-201ENST00000457863 SPTA1P02549 2419 aa1.19□□□□□ -2.22
HMGB3P30-201ENST00000457863 APELAP0DMC3 54 aa1.19□□□□□ -2.22
HMGB3P30-201ENST00000457863 DEFB133Q30KQ1 61 aa1.19□□□□□ -2.22
HMGB3P30-201ENST00000457863 DEFB108BQ8NET1 73 aa1.18□□□□□ -2.22
HMGB3P30-201ENST00000457863 CSMD3Q7Z407 3707 aa1.17□□□□□ -2.22
HMGB3P30-201ENST00000457863 HTN1P15515 57 aa1.17□□□□□ -2.22
HMGB3P30-201ENST00000457863 PKD1L2Q7Z442 2459 aa1.17□□□□□ -2.22
HMGB3P30-201ENST00000457863 PIEZO1Q92508 2521 aa1.16□□□□□ -2.22
HMGB3P30-201ENST00000457863 ATRQ13535 2644 aa1.16□□□□□ -2.22
HMGB3P30-201ENST00000457863 U3KQA8 63 aa1.15□□□□□ -2.23
HMGB3P30-201ENST00000457863 PRRC2CQ9Y520 2896 aaKnown RBP1.15□□□□□ -2.23
HMGB3P30-201ENST00000457863 EP300Q09472 2414 aaPredicted RBP1.15□□□□□ -2.23
HMGB3P30-201ENST00000457863 CHD9Q3L8U1 2897 aa1.14□□□□□ -2.23
HMGB3P30-201ENST00000457863 HECTD1Q9ULT8 2610 aa1.14□□□□□ -2.23
HMGB3P30-201ENST00000457863 KRTAP4-1Q9BYQ7 146 aa1.14□□□□□ -2.23
HMGB3P30-201ENST00000457863 BDP1A6H8Y1 2624 aa1.14□□□□□ -2.23
HMGB3P30-201ENST00000457863 CHD6Q8TD26 2715 aa1.13□□□□□ -2.23
HMGB3P30-201ENST00000457863 A0A0C4DFX4 3053 aa1.13□□□□□ -2.23
HMGB3P30-201ENST00000457863 WNK1Q9H4A3 2382 aa1.12□□□□□ -2.23
HMGB3P30-201ENST00000457863 H3BUX3 64 aa1.12□□□□□ -2.23
HMGB3P30-201ENST00000457863 DEFB1P60022 68 aa1.12□□□□□ -2.23
HMGB3P30-201ENST00000457863 CREBBPQ92793 2442 aa1.12□□□□□ -2.23
HMGB3P30-201ENST00000457863 FBN3Q75N90 2809 aa1.12□□□□□ -2.23
HMGB3P30-201ENST00000457863 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
HMGB3P30-201ENST00000457863 VWFP04275 2813 aa1.11□□□□□ -2.23
HMGB3P30-201ENST00000457863 RHPN1-AS1Q9BWJ2 59 aa1.11□□□□□ -2.23
HMGB3P30-201ENST00000457863 NCOR1O75376 2440 aa1.11□□□□□ -2.23
HMGB3P30-201ENST00000457863 DEFB135Q30KP9 77 aa1.1□□□□□ -2.23
HMGB3P30-201ENST00000457863 NAV2Q8IVL1 2488 aa1.1□□□□□ -2.23
HMGB3P30-201ENST00000457863 SPINK6Q6UWN8 80 aa1.09□□□□□ -2.23
HMGB3P30-201ENST00000457863 TENM4Q6N022 2769 aa1.08□□□□□ -2.24
HMGB3P30-201ENST00000457863 AKAP13Q12802 2813 aa1.08□□□□□ -2.24
HMGB3P30-201ENST00000457863 FAM186AA6NE01 2351 aa1.08□□□□□ -2.24
HMGB3P30-201ENST00000457863 ANK2Q01484 3957 aa1.08□□□□□ -2.24
HMGB3P30-201ENST00000457863 A0A096LNI7 61 aa1.07□□□□□ -2.24
HMGB3P30-201ENST00000457863 M0QZ58 72 aa1.07□□□□□ -2.24
HMGB3P30-201ENST00000457863 SMR3AQ99954 134 aa1.07□□□□□ -2.24
HMGB3P30-201ENST00000457863 SETD2Q9BYW2 2564 aaPredicted RBP1.07□□□□□ -2.24
HMGB3P30-201ENST00000457863 ACACAQ13085 2346 aa1.07□□□□□ -2.24
HMGB3P30-201ENST00000457863 NBASA2RRP1 2371 aa1.07□□□□□ -2.24
HMGB3P30-201ENST00000457863 SRCAPQ6ZRS2 3230 aa1.07□□□□□ -2.24
HMGB3P30-201ENST00000457863 M0R2T5 61 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms