RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 CIRBP-AS1Q8TBR5 109 aa10.57□□□□□ -0.72
LSS-205ENST00000457828 FAM229AH3BQW9 127 aa10.56□□□□□ -0.72
LSS-205ENST00000457828 A0A1W2PNM2 257 aa10.56□□□□□ -0.72
LSS-205ENST00000457828 PCOTHQ58A44 107 aa10.56□□□□□ -0.72
LSS-205ENST00000457828 A6NED7 52 aa10.55□□□□□ -0.72
LSS-205ENST00000457828 IGLV1-50A0A075B6I6 118 aa10.54□□□□□ -0.72
LSS-205ENST00000457828 PRR15LQ9BU68 103 aa10.54□□□□□ -0.72
LSS-205ENST00000457828 A0A1B0GW54 56 aa10.52□□□□□ -0.73
LSS-205ENST00000457828 OCR1Q9BZK8 76 aa10.51□□□□□ -0.73
LSS-205ENST00000457828 DMBT1Q9UGM3 2413 aaPredicted RBP10.51□□□□□ -0.73
LSS-205ENST00000457828 PMAIP1Q13794 54 aa10.51□□□□□ -0.73
LSS-205ENST00000457828 BSNQ9UPA5 3926 aa10.5□□□□□ -0.73
LSS-205ENST00000457828 C1orf64Q8NEQ6 169 aa10.49□□□□□ -0.73
LSS-205ENST00000457828 FP248Q71RG6 208 aaPredicted RBP10.48□□□□□ -0.73
LSS-205ENST00000457828 C9orf163Q8N9P6 203 aa10.47□□□□□ -0.73
LSS-205ENST00000457828 OTOGQ6ZRI0 2925 aa10.47□□□□□ -0.73
LSS-205ENST00000457828 hDV103S1A0JD37 113 aa10.47□□□□□ -0.73
LSS-205ENST00000457828 IGLV5-48A0A075B6I7 105 aa10.46□□□□□ -0.73
LSS-205ENST00000457828 TNP2Q05952 138 aa10.46□□□□□ -0.74
LSS-205ENST00000457828 IGFL1Q6UW32 110 aa10.46□□□□□ -0.74
LSS-205ENST00000457828 PDZD2O15018 2839 aa10.46□□□□□ -0.74
LSS-205ENST00000457828 IGHV6-1A0A0B4J1U7 121 aa10.45□□□□□ -0.74
LSS-205ENST00000457828 EPM2AB3EWF7 344 aa10.45□□□□□ -0.74
LSS-205ENST00000457828 SMR3BP02814 79 aaPredicted RBP10.45□□□□□ -0.74
LSS-205ENST00000457828 FAM229BQ4G0N7 80 aa10.43□□□□□ -0.74
LSS-205ENST00000457828 A8MUN3 132 aa10.42□□□□□ -0.74
LSS-205ENST00000457828 J3QL48 77 aa10.39□□□□□ -0.75
LSS-205ENST00000457828 DSCR10P59022 87 aa10.38□□□□□ -0.75
LSS-205ENST00000457828 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
LSS-205ENST00000457828 KRTAP21-3Q3LHN1 58 aa10.37□□□□□ -0.75
LSS-205ENST00000457828 ZFHX3Q15911 3703 aa10.37□□□□□ -0.75
LSS-205ENST00000457828 MOBPQ13875 183 aa10.36□□□□□ -0.75
LSS-205ENST00000457828 TRAV22A0A0B4J277 110 aa10.34□□□□□ -0.75
LSS-205ENST00000457828 TENM1Q9UKZ4 2725 aa10.34□□□□□ -0.75
LSS-205ENST00000457828 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
LSS-205ENST00000457828 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
LSS-205ENST00000457828 NBPF19A0A087WUL8 3843 aa10.34□□□□□ -0.75
LSS-205ENST00000457828 CNBPP62633 177 aaKnown RBP10.33□□□□□ -0.76
LSS-205ENST00000457828 KRTAP26-1Q6PEX3 210 aa10.33□□□□□ -0.76
LSS-205ENST00000457828 CSMD2Q7Z408 3487 aa10.32□□□□□ -0.76
LSS-205ENST00000457828 LIMD2Q9BT23 127 aa10.32□□□□□ -0.76
LSS-205ENST00000457828 A8MWP4 228 aa10.3□□□□□ -0.76
LSS-205ENST00000457828 SPAG11AQ6PDA7 123 aa10.3□□□□□ -0.76
LSS-205ENST00000457828 SEC61GP60059 68 aa10.3□□□□□ -0.76
LSS-205ENST00000457828 PRR15Q8IV56 129 aa10.3□□□□□ -0.76
LSS-205ENST00000457828 SPRR4Q96PI1 79 aa10.3□□□□□ -0.76
LSS-205ENST00000457828 KRTAP1-5Q9BYS1 174 aa10.3□□□□□ -0.76
LSS-205ENST00000457828 SPACA4Q8TDM5 124 aa10.28□□□□□ -0.76
LSS-205ENST00000457828 TYMSOSQ8TAI1 123 aa10.27□□□□□ -0.76
LSS-205ENST00000457828 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
LSS-205ENST00000457828 FBN1P35555 2871 aaKnown RBP10.26□□□□□ -0.77
LSS-205ENST00000457828 H3BPC8 53 aa10.26□□□□□ -0.77
LSS-205ENST00000457828 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
LSS-205ENST00000457828 LCE6AA0A183 80 aa10.23□□□□□ -0.77
LSS-205ENST00000457828 PSORS1C2Q9UIG4 136 aa10.23□□□□□ -0.77
LSS-205ENST00000457828 SPRR1AP35321 89 aa10.22□□□□□ -0.77
LSS-205ENST00000457828 COA5Q86WW8 74 aa10.22□□□□□ -0.77
LSS-205ENST00000457828 ZNF861PO60384 105 aa10.21□□□□□ -0.77
LSS-205ENST00000457828 TP53AIP1Q9HCN2 124 aa10.2□□□□□ -0.78
LSS-205ENST00000457828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.2□□□□□ -0.78
LSS-205ENST00000457828 PKD1L1Q8TDX9 2849 aa10.2□□□□□ -0.78
LSS-205ENST00000457828 ANAPC11Q9NYG5 84 aa10.17□□□□□ -0.78
LSS-205ENST00000457828 VWFP04275 2813 aa10.17□□□□□ -0.78
LSS-205ENST00000457828 Q1T7F1 81 aa10.16□□□□□ -0.78
LSS-205ENST00000457828 VPS13CQ709C8 3753 aa10.15□□□□□ -0.78
LSS-205ENST00000457828 IGLV7-43P04211 117 aa10.14□□□□□ -0.79
LSS-205ENST00000457828 CYP4F30PQ9H0H9 118 aa10.13□□□□□ -0.79
LSS-205ENST00000457828 KRTAP4-16G5E9R7 235 aaPredicted RBP10.12□□□□□ -0.79
LSS-205ENST00000457828 TENM3Q9P273 2699 aa10.12□□□□□ -0.79
LSS-205ENST00000457828 C8orf17Q9NRJ1 99 aa10.11□□□□□ -0.79
LSS-205ENST00000457828 SPANXA2-OT1Q8N9U9 137 aa10.08□□□□□ -0.8
LSS-205ENST00000457828 MRPL34Q9BQ48 92 aaKnown RBP10.08□□□□□ -0.8
LSS-205ENST00000457828 LOC101927531A0A1B0GV80 90 aa10.05□□□□□ -0.8
LSS-205ENST00000457828 KRTAP10-2P60368 255 aa10.05□□□□□ -0.8
LSS-205ENST00000457828 Q6ZR54 194 aa10.04□□□□□ -0.8
LSS-205ENST00000457828 A0A1B0GVX0 72 aa10.03□□□□□ -0.8
LSS-205ENST00000457828 TENM2Q9NT68 2774 aa10.02□□□□□ -0.81
LSS-205ENST00000457828 KRTAP7-1Q8IUC3 87 aa10.02□□□□□ -0.81
LSS-205ENST00000457828 SPINK1P00995 79 aa10.02□□□□□ -0.81
LSS-205ENST00000457828 LINC00304Q8N9R0 145 aa10.02□□□□□ -0.81
LSS-205ENST00000457828 IGKV2D-30A0A075B6S6 120 aa10.01□□□□□ -0.81
LSS-205ENST00000457828 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
LSS-205ENST00000457828 Q8N9P0 234 aaPredicted RBP10.01□□□□□ -0.81
LSS-205ENST00000457828 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
LSS-205ENST00000457828 SSBP3-AS1Q7Z2R9 100 aa10□□□□□ -0.81
LSS-205ENST00000457828 ZCCHC13Q8WW36 166 aaKnown RBP10□□□□□ -0.81
LSS-205ENST00000457828 TGP01266 2768 aa10□□□□□ -0.81
LSS-205ENST00000457828 ACYP2P14621 99 aa10□□□□□ -0.81
LSS-205ENST00000457828 MMP24-AS1A0A0U1RRL7 71 aa9.99□□□□□ -0.81
LSS-205ENST00000457828 KRTAP10-1P60331 282 aa9.99□□□□□ -0.81
LSS-205ENST00000457828 LINC00472Q9H8W2 130 aa9.98□□□□□ -0.81
LSS-205ENST00000457828 A0A1B0GU69 56 aa9.97□□□□□ -0.81
LSS-205ENST00000457828 Q5VV11 94 aa9.97□□□□□ -0.81
LSS-205ENST00000457828 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
LSS-205ENST00000457828 IGLV8-61A0A075B6I0 122 aa9.96□□□□□ -0.81
LSS-205ENST00000457828 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.82
LSS-205ENST00000457828 PRR26Q8N8Z3 221 aa9.95□□□□□ -0.82
LSS-205ENST00000457828 IGLV7-46A0A075B6I9 117 aa9.94□□□□□ -0.82
LSS-205ENST00000457828 LINC00313P59037 77 aa9.92□□□□□ -0.82
LSS-205ENST00000457828 KRTAP29-1A8MX34 341 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms