RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	TRIAP1	O43715	76 aa		7.42	□□□□□ -1.22
SNHG17-208	ENST00000456953	C3orf22	Q8N5N4	141 aa		7.42	□□□□□ -1.22
SNHG17-208	ENST00000456953		Q9BRP9	147 aa		7.42	□□□□□ -1.22
SNHG17-208	ENST00000456953	SNCG	O76070	127 aa		7.41	□□□□□ -1.22
SNHG17-208	ENST00000456953	SCGB1C2	P0DMR2	95 aa		7.41	□□□□□ -1.22
SNHG17-208	ENST00000456953	COL5A1-AS1	Q5SY13	56 aa		7.4	□□□□□ -1.22
SNHG17-208	ENST00000456953	LINC00575	Q6W349	94 aa		7.4	□□□□□ -1.22
SNHG17-208	ENST00000456953	ZNF706	Q9Y5V0	76 aa	Predicted RBP	7.4	□□□□□ -1.22
SNHG17-208	ENST00000456953	hADV29S1	A0JD25	119 aa		7.39	□□□□□ -1.23
SNHG17-208	ENST00000456953	ERC2-IT1	O76042	136 aa		7.39	□□□□□ -1.23
SNHG17-208	ENST00000456953	C4orf48	Q5BLP8	95 aa		7.39	□□□□□ -1.23
SNHG17-208	ENST00000456953	NAA38	Q9BRA0	125 aa	Known RBP	7.39	□□□□□ -1.23
SNHG17-208	ENST00000456953	MT1H	P80294	61 aa		7.37	□□□□□ -1.23
SNHG17-208	ENST00000456953	LYRM7	Q5U5X0	104 aa		7.37	□□□□□ -1.23
SNHG17-208	ENST00000456953	C9orf118	A6NHY6	69 aa		7.36	□□□□□ -1.23
SNHG17-208	ENST00000456953		H3BUT2	72 aa		7.36	□□□□□ -1.23
SNHG17-208	ENST00000456953	TAX1BP3	O14907	124 aa		7.36	□□□□□ -1.23
SNHG17-208	ENST00000456953	GAGE2A	Q6NT46	116 aa		7.36	□□□□□ -1.23
SNHG17-208	ENST00000456953	CLEC2B	Q92478	149 aa		7.36	□□□□□ -1.23
SNHG17-208	ENST00000456953	KRTAP19-2	Q3LHN2	52 aa		7.35	□□□□□ -1.23
SNHG17-208	ENST00000456953	ST20-AS1	Q8NBB2	130 aa		7.35	□□□□□ -1.23
SNHG17-208	ENST00000456953	DEFB105A	Q8NG35	78 aa		7.35	□□□□□ -1.23
SNHG17-208	ENST00000456953	FAM218A	Q96MZ4	157 aa		7.35	□□□□□ -1.23
SNHG17-208	ENST00000456953	SPRR4	Q96PI1	79 aa		7.35	□□□□□ -1.23
SNHG17-208	ENST00000456953		A0A1B0GX51	115 aa		7.34	□□□□□ -1.23
SNHG17-208	ENST00000456953	LOR	P23490	312 aa	Predicted RBP	7.34	□□□□□ -1.23
SNHG17-208	ENST00000456953		Q6ZQY7	126 aa		7.34	□□□□□ -1.23
SNHG17-208	ENST00000456953	KRTAP9-7	A8MTY7	169 aa		7.33	□□□□□ -1.24
SNHG17-208	ENST00000456953	DNAL4	O96015	105 aa		7.33	□□□□□ -1.24
SNHG17-208	ENST00000456953	SPINK1	P00995	79 aa		7.33	□□□□□ -1.24
SNHG17-208	ENST00000456953	XP32	Q5T750	250 aa		7.33	□□□□□ -1.24
SNHG17-208	ENST00000456953	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.33	□□□□□ -1.24
SNHG17-208	ENST00000456953	FABP2	P12104	132 aa		7.32	□□□□□ -1.24
SNHG17-208	ENST00000456953		Q8NBF4	154 aa		7.32	□□□□□ -1.24
SNHG17-208	ENST00000456953	TEX49	A0A1B0GTD5	131 aa		7.31	□□□□□ -1.24
SNHG17-208	ENST00000456953		A0A1W2PPM0	123 aa		7.31	□□□□□ -1.24
SNHG17-208	ENST00000456953	KRTAP10-6	P60371	365 aa	Predicted RBP	7.31	□□□□□ -1.24
SNHG17-208	ENST00000456953	ATXN8	Q156A1	80 aa		7.31	□□□□□ -1.24
SNHG17-208	ENST00000456953	LST1	O00453	97 aa		7.3	□□□□□ -1.24
SNHG17-208	ENST00000456953	GHRH	P01286	108 aa		7.3	□□□□□ -1.24
SNHG17-208	ENST00000456953	LINC00483	Q53H64	154 aa		7.3	□□□□□ -1.24
SNHG17-208	ENST00000456953	IGLV5-48	A0A075B6I7	105 aa		7.29	□□□□□ -1.24
SNHG17-208	ENST00000456953	TRBV20-1	A0A075B6N2	111 aa		7.29	□□□□□ -1.24
SNHG17-208	ENST00000456953	TCL1B	O95988	128 aa		7.29	□□□□□ -1.24
SNHG17-208	ENST00000456953	TRAC	P01848	142 aa		7.29	□□□□□ -1.24
SNHG17-208	ENST00000456953	OCIAD2	Q56VL3	154 aa		7.29	□□□□□ -1.24
SNHG17-208	ENST00000456953	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.28	□□□□□ -1.24
SNHG17-208	ENST00000456953	LAMTOR3	Q9UHA4	124 aa		7.28	□□□□□ -1.24
SNHG17-208	ENST00000456953	SPRR1B	P22528	89 aa		7.27	□□□□□ -1.25
SNHG17-208	ENST00000456953		Q8N377	158 aa		7.27	□□□□□ -1.25
SNHG17-208	ENST00000456953	ORMDL1	Q9P0S3	153 aa		7.27	□□□□□ -1.25
SNHG17-208	ENST00000456953	IGLV9-49	A0A0B4J1Y8	123 aa		7.26	□□□□□ -1.25
SNHG17-208	ENST00000456953	PPDPFL	Q8WWR9	84 aa		7.26	□□□□□ -1.25
SNHG17-208	ENST00000456953	SPCS1	Q9Y6A9	102 aa		7.26	□□□□□ -1.25
SNHG17-208	ENST00000456953		F8WEM9	126 aa		7.25	□□□□□ -1.25
SNHG17-208	ENST00000456953		H3BQ85	93 aa		7.25	□□□□□ -1.25
SNHG17-208	ENST00000456953	RPS29	P62273	56 aa	Known RBP	7.25	□□□□□ -1.25
SNHG17-208	ENST00000456953	C9orf153	Q5TBE3	101 aa		7.25	□□□□□ -1.25
SNHG17-208	ENST00000456953	TMEM256-PLSCR3	K7ERE1	68 aa		7.23	□□□□□ -1.25
SNHG17-208	ENST00000456953	MOBP	Q13875	183 aa		7.23	□□□□□ -1.25
SNHG17-208	ENST00000456953		C9JAW5	83 aa		7.22	□□□□□ -1.25
SNHG17-208	ENST00000456953		H3BMG7	143 aa		7.22	□□□□□ -1.25
SNHG17-208	ENST00000456953	BAALC-AS2	P0C853	105 aa		7.22	□□□□□ -1.25
SNHG17-208	ENST00000456953	SMIM29	Q86T20	159 aa		7.22	□□□□□ -1.25
SNHG17-208	ENST00000456953	IGLV8-61	A0A075B6I0	122 aa		7.21	□□□□□ -1.26
SNHG17-208	ENST00000456953		M0R2T5	61 aa		7.21	□□□□□ -1.26
SNHG17-208	ENST00000456953		K7EP34	96 aa		7.2	□□□□□ -1.26
SNHG17-208	ENST00000456953	NDUFV3	P56181	108 aa	Known RBP	7.2	□□□□□ -1.26
SNHG17-208	ENST00000456953	GTF2H5	Q6ZYL4	71 aa		7.2	□□□□□ -1.26
SNHG17-208	ENST00000456953	PCOTH	Q58A44	107 aa		7.19	□□□□□ -1.26
SNHG17-208	ENST00000456953	SSBP3-AS1	Q7Z2R9	100 aa		7.19	□□□□□ -1.26
SNHG17-208	ENST00000456953	UBE2V1	Q13404	147 aa		7.18	□□□□□ -1.26
SNHG17-208	ENST00000456953	FLG	P20930	4061 aa	Predicted RBP	7.17	□□□□□ -1.26
SNHG17-208	ENST00000456953	ANKRD29	Q8N6D5	301 aa		7.17	□□□□□ -1.26
SNHG17-208	ENST00000456953	SSPO	A2VEC9	5147 aa		7.17	□□□□□ -1.26
SNHG17-208	ENST00000456953		A0A1B0GV72	72 aa		7.16	□□□□□ -1.26
SNHG17-208	ENST00000456953	MTURN	Q8N3F0	131 aa		7.16	□□□□□ -1.26
SNHG17-208	ENST00000456953	USH2A	O75445	5202 aa		7.15	□□□□□ -1.26
SNHG17-208	ENST00000456953		Q6JHZ5	121 aa		7.15	□□□□□ -1.26
SNHG17-208	ENST00000456953		H3BT86	120 aa		7.14	□□□□□ -1.27
SNHG17-208	ENST00000456953		A0A0G2JQZ4	141 aa		7.12	□□□□□ -1.27
SNHG17-208	ENST00000456953		A0A1B0GV90	55 aa		7.11	□□□□□ -1.27
SNHG17-208	ENST00000456953	RBM3	P98179	157 aa	Known RBP	7.11	□□□□□ -1.27
SNHG17-208	ENST00000456953	IGFL1	Q6UW32	110 aa		7.11	□□□□□ -1.27
SNHG17-208	ENST00000456953	HRCT1	Q6UXD1	115 aa		7.11	□□□□□ -1.27
SNHG17-208	ENST00000456953	JMJD7-PLA2G4B	H0Y9G9	81 aa		7.1	□□□□□ -1.27
SNHG17-208	ENST00000456953	COX6B2	Q6YFQ2	88 aa		7.1	□□□□□ -1.27
SNHG17-208	ENST00000456953	DSCR8	Q96T75	97 aa		7.1	□□□□□ -1.27
SNHG17-208	ENST00000456953	CD164	Q04900	197 aa		7.08	□□□□□ -1.28
SNHG17-208	ENST00000456953	PRO0461	Q9UI25	63 aa		7.08	□□□□□ -1.28
SNHG17-208	ENST00000456953	C9orf92	A6NGG3	77 aa		7.07	□□□□□ -1.28
SNHG17-208	ENST00000456953		F8W1H4	67 aa		7.07	□□□□□ -1.28
SNHG17-208	ENST00000456953	SMCP	P49901	116 aa	Predicted RBP	7.07	□□□□□ -1.28
SNHG17-208	ENST00000456953	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	7.06	□□□□□ -1.28
SNHG17-208	ENST00000456953	TRBV7-4	A0A0J9YYF1	115 aa		7.05	□□□□□ -1.28
SNHG17-208	ENST00000456953	CCK	P06307	115 aa		7.05	□□□□□ -1.28
SNHG17-208	ENST00000456953	TEN1	Q86WV5	123 aa		7.05	□□□□□ -1.28
SNHG17-208	ENST00000456953	VPS25	Q9BRG1	176 aa		7.05	□□□□□ -1.28
SNHG17-208	ENST00000456953	C14orf132	Q9NPU4	83 aa		7.05	□□□□□ -1.28
SNHG17-208	ENST00000456953	PDE6G	P18545	87 aa		7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 209 ms