RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
HDAC9-217ENST00000455069 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
HDAC9-217ENST00000455069 LAMTOR3Q9UHA4 124 aa6.38□□□□□ -1.39
HDAC9-217ENST00000455069 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
HDAC9-217ENST00000455069 NHP2Q9NX24 153 aaKnown RBP6.37□□□□□ -1.39
HDAC9-217ENST00000455069 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
HDAC9-217ENST00000455069 FXYD2P54710 66 aa6.36□□□□□ -1.39
HDAC9-217ENST00000455069 FP248Q71RG6 208 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-217ENST00000455069 CEND1Q8N111 149 aa6.36□□□□□ -1.39
HDAC9-217ENST00000455069 A0A0G2JQZ4 141 aa6.35□□□□□ -1.39
HDAC9-217ENST00000455069 H7C2G1 150 aa6.35□□□□□ -1.39
HDAC9-217ENST00000455069 VAMP3Q15836 100 aa6.35□□□□□ -1.39
HDAC9-217ENST00000455069 Q6ZQY7 126 aa6.35□□□□□ -1.39
HDAC9-217ENST00000455069 hADV29S1A0JD25 119 aa6.34□□□□□ -1.39
HDAC9-217ENST00000455069 SLC25A20O43772 301 aa6.34□□□□□ -1.39
HDAC9-217ENST00000455069 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.39
HDAC9-217ENST00000455069 RAB37Q96AX2 223 aa6.34□□□□□ -1.39
HDAC9-217ENST00000455069 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
HDAC9-217ENST00000455069 BVES-AS1Q5T3Y7 98 aa6.33□□□□□ -1.4
HDAC9-217ENST00000455069 PRO1933Q9H354 126 aa6.32□□□□□ -1.4
HDAC9-217ENST00000455069 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
HDAC9-217ENST00000455069 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
HDAC9-217ENST00000455069 CD164Q04900 197 aa6.3□□□□□ -1.4
HDAC9-217ENST00000455069 HSD52Q0P140 79 aa6.3□□□□□ -1.4
HDAC9-217ENST00000455069 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-217ENST00000455069 LIMD2Q9BT23 127 aa6.29□□□□□ -1.4
HDAC9-217ENST00000455069 PRO1854Q9UHT4 67 aa6.29□□□□□ -1.4
HDAC9-217ENST00000455069 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
HDAC9-217ENST00000455069 K7ERJ3 54 aa6.28□□□□□ -1.4
HDAC9-217ENST00000455069 UQCR10Q9UDW1 63 aa6.28□□□□□ -1.4
HDAC9-217ENST00000455069 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
HDAC9-217ENST00000455069 A0A0U1RQV1 116 aa6.27□□□□□ -1.41
HDAC9-217ENST00000455069 TRIAP1O43715 76 aa6.27□□□□□ -1.41
HDAC9-217ENST00000455069 MUC17Q685J3 4493 aa6.26□□□□□ -1.41
HDAC9-217ENST00000455069 F8WEM9 126 aa6.26□□□□□ -1.41
HDAC9-217ENST00000455069 H0YGX0 51 aa6.26□□□□□ -1.41
HDAC9-217ENST00000455069 Q5XG85 94 aa6.26□□□□□ -1.41
HDAC9-217ENST00000455069 IGFL1Q6UW32 110 aa6.25□□□□□ -1.41
HDAC9-217ENST00000455069 PPDPFLQ8WWR9 84 aa6.25□□□□□ -1.41
HDAC9-217ENST00000455069 OCIAD2Q56VL3 154 aa6.24□□□□□ -1.41
HDAC9-217ENST00000455069 C1orf195Q5TG92 126 aa6.23□□□□□ -1.41
HDAC9-217ENST00000455069 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
HDAC9-217ENST00000455069 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
HDAC9-217ENST00000455069 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
HDAC9-217ENST00000455069 H3BUT2 72 aa6.22□□□□□ -1.41
HDAC9-217ENST00000455069 Q6JHZ5 121 aa6.22□□□□□ -1.41
HDAC9-217ENST00000455069 A0A1B0GX51 115 aa6.21□□□□□ -1.42
HDAC9-217ENST00000455069 SNHG12Q9BXW3 62 aa6.21□□□□□ -1.42
HDAC9-217ENST00000455069 TRBV7-7A0A0K0K1E9 115 aa6.2□□□□□ -1.42
HDAC9-217ENST00000455069 SMIM6P0DI80 62 aa6.2□□□□□ -1.42
HDAC9-217ENST00000455069 ASB16-AS1Q495Z4 193 aa6.2□□□□□ -1.42
HDAC9-217ENST00000455069 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
HDAC9-217ENST00000455069 SNCGO76070 127 aa6.18□□□□□ -1.42
HDAC9-217ENST00000455069 PSMB2P49721 201 aa6.18□□□□□ -1.42
HDAC9-217ENST00000455069 NDUFV3P56181 108 aaKnown RBP6.18□□□□□ -1.42
HDAC9-217ENST00000455069 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
HDAC9-217ENST00000455069 LOC105371267A0A1B0GV96 52 aa6.16□□□□□ -1.42
HDAC9-217ENST00000455069 H3BS24 57 aa6.16□□□□□ -1.42
HDAC9-217ENST00000455069 TCL1BO95988 128 aa6.16□□□□□ -1.42
HDAC9-217ENST00000455069 FABP2P12104 132 aa6.15□□□□□ -1.42
HDAC9-217ENST00000455069 COX6CP09669 75 aa6.14□□□□□ -1.43
HDAC9-217ENST00000455069 Q6Q795 121 aa6.14□□□□□ -1.43
HDAC9-217ENST00000455069 ORMDL1Q9P0S3 153 aa6.14□□□□□ -1.43
HDAC9-217ENST00000455069 H3BMG7 143 aa6.13□□□□□ -1.43
HDAC9-217ENST00000455069 DNAL4O96015 105 aa6.13□□□□□ -1.43
HDAC9-217ENST00000455069 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
HDAC9-217ENST00000455069 LST1O00453 97 aa6.12□□□□□ -1.43
HDAC9-217ENST00000455069 TEN1Q86WV5 123 aa6.12□□□□□ -1.43
HDAC9-217ENST00000455069 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
HDAC9-217ENST00000455069 A0A1B0GV72 72 aa6.11□□□□□ -1.43
HDAC9-217ENST00000455069 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
HDAC9-217ENST00000455069 M0R143 59 aa6.11□□□□□ -1.43
HDAC9-217ENST00000455069 TRACP01848 142 aa6.11□□□□□ -1.43
HDAC9-217ENST00000455069 NAA38Q9BRA0 125 aaKnown RBP6.1□□□□□ -1.43
HDAC9-217ENST00000455069 A0A087WSZ3 146 aa6.09□□□□□ -1.43
HDAC9-217ENST00000455069 TMEM256-PLSCR3K7ERE1 68 aa6.09□□□□□ -1.43
HDAC9-217ENST00000455069 H3BQ85 93 aa6.08□□□□□ -1.44
HDAC9-217ENST00000455069 SCGB1C2P0DMR2 95 aa6.08□□□□□ -1.44
HDAC9-217ENST00000455069 PCOTHQ58A44 107 aa6.08□□□□□ -1.44
HDAC9-217ENST00000455069 Q96NJ1 140 aa6.08□□□□□ -1.44
HDAC9-217ENST00000455069 TSTD3H0UI37 97 aa6.07□□□□□ -1.44
HDAC9-217ENST00000455069 UBE2V1Q13404 147 aa6.07□□□□□ -1.44
HDAC9-217ENST00000455069 SS18L2Q9UHA2 77 aa6.07□□□□□ -1.44
HDAC9-217ENST00000455069 RPL37P61927 97 aaKnown RBP6.06□□□□□ -1.44
HDAC9-217ENST00000455069 ANKRD29Q8N6D5 301 aa6.06□□□□□ -1.44
HDAC9-217ENST00000455069 TRBV7-4A0A0J9YYF1 115 aa6.04□□□□□ -1.44
HDAC9-217ENST00000455069 BATFQ16520 125 aa6.03□□□□□ -1.44
HDAC9-217ENST00000455069 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
HDAC9-217ENST00000455069 OBSCN-AS1Q96MR7 158 aa6.03□□□□□ -1.44
HDAC9-217ENST00000455069 CCKP06307 115 aa6.02□□□□□ -1.45
HDAC9-217ENST00000455069 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
HDAC9-217ENST00000455069 KRTAP19-2Q3LHN2 52 aa6.02□□□□□ -1.45
HDAC9-217ENST00000455069 ATXN8Q156A1 80 aa6.01□□□□□ -1.45
HDAC9-217ENST00000455069 RBM3P98179 157 aaKnown RBP6□□□□□ -1.45
HDAC9-217ENST00000455069 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
HDAC9-217ENST00000455069 TAX1BP3O14907 124 aa5.98□□□□□ -1.45
HDAC9-217ENST00000455069 Q75L30 129 aa5.98□□□□□ -1.45
HDAC9-217ENST00000455069 LINC00472Q9H8W2 130 aa5.98□□□□□ -1.45
HDAC9-217ENST00000455069 DSCR8Q96T75 97 aa5.97□□□□□ -1.45
HDAC9-217ENST00000455069 SIGMAR1Q99720 223 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms