RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 KRTAP9-2Q9BYQ4 174 aa9.32□□□□□ -0.92
TNFRSF4-202ENST00000453580 KRTAP4-1Q9BYQ7 146 aa9.31□□□□□ -0.92
TNFRSF4-202ENST00000453580 DLEU1O43261 78 aa9.3□□□□□ -0.92
TNFRSF4-202ENST00000453580 COX8AP10176 69 aa9.3□□□□□ -0.92
TNFRSF4-202ENST00000453580 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
TNFRSF4-202ENST00000453580 CLEC2BQ92478 149 aa9.29□□□□□ -0.92
TNFRSF4-202ENST00000453580 IGLV8-61A0A075B6I0 122 aa9.28□□□□□ -0.92
TNFRSF4-202ENST00000453580 OCIAD2Q56VL3 154 aa9.27□□□□□ -0.93
TNFRSF4-202ENST00000453580 SNHG12Q9BXW3 62 aa9.27□□□□□ -0.93
TNFRSF4-202ENST00000453580 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
TNFRSF4-202ENST00000453580 GHRHP01286 108 aa9.25□□□□□ -0.93
TNFRSF4-202ENST00000453580 RAB37Q96AX2 223 aa9.25□□□□□ -0.93
TNFRSF4-202ENST00000453580 C12orf57Q99622 126 aa9.25□□□□□ -0.93
TNFRSF4-202ENST00000453580 HIGD1BQ9P298 99 aa9.24□□□□□ -0.93
TNFRSF4-202ENST00000453580 TRBV7-7A0A0K0K1E9 115 aa9.23□□□□□ -0.93
TNFRSF4-202ENST00000453580 H0YGX0 51 aa9.23□□□□□ -0.93
TNFRSF4-202ENST00000453580 IGFL1Q6UW32 110 aa9.22□□□□□ -0.93
TNFRSF4-202ENST00000453580 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
TNFRSF4-202ENST00000453580 A0A0B4J2C4 111 aa9.2□□□□□ -0.94
TNFRSF4-202ENST00000453580 VAMP8Q9BV40 100 aa9.19□□□□□ -0.94
TNFRSF4-202ENST00000453580 SS18L2Q9UHA2 77 aa9.19□□□□□ -0.94
TNFRSF4-202ENST00000453580 TMEM238LA0A1B0GVL6 79 aa9.18□□□□□ -0.94
TNFRSF4-202ENST00000453580 A6NJY4 79 aa9.18□□□□□ -0.94
TNFRSF4-202ENST00000453580 CFC1BP0CG36 223 aa9.18□□□□□ -0.94
TNFRSF4-202ENST00000453580 CFC1P0CG37 223 aa9.18□□□□□ -0.94
TNFRSF4-202ENST00000453580 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
TNFRSF4-202ENST00000453580 C14orf144Q96I85 54 aa9.18□□□□□ -0.94
TNFRSF4-202ENST00000453580 PAM16Q9Y3D7 125 aa9.17□□□□□ -0.94
TNFRSF4-202ENST00000453580 LST1O00453 97 aa9.16□□□□□ -0.94
TNFRSF4-202ENST00000453580 A0A1B0GX51 115 aa9.15□□□□□ -0.94
TNFRSF4-202ENST00000453580 Q6Q795 121 aa9.14□□□□□ -0.95
TNFRSF4-202ENST00000453580 TEN1Q86WV5 123 aa9.12□□□□□ -0.95
TNFRSF4-202ENST00000453580 CEND1Q8N111 149 aa9.12□□□□□ -0.95
TNFRSF4-202ENST00000453580 PRO1854Q9UHT4 67 aa9.12□□□□□ -0.95
TNFRSF4-202ENST00000453580 H3BUT2 72 aa9.11□□□□□ -0.95
TNFRSF4-202ENST00000453580 NDUFV3P56181 108 aaKnown RBP9.11□□□□□ -0.95
TNFRSF4-202ENST00000453580 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
TNFRSF4-202ENST00000453580 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
TNFRSF4-202ENST00000453580 H3BQ85 93 aa9.09□□□□□ -0.95
TNFRSF4-202ENST00000453580 C2orf91Q6ZV80 131 aa9.08□□□□□ -0.96
TNFRSF4-202ENST00000453580 KRTAP19-2Q3LHN2 52 aa9.07□□□□□ -0.96
TNFRSF4-202ENST00000453580 LCE2DQ5TA82 110 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF4-202ENST00000453580 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
TNFRSF4-202ENST00000453580 Q75L30 129 aa9.07□□□□□ -0.96
TNFRSF4-202ENST00000453580 OBSCN-AS1Q96MR7 158 aa9.07□□□□□ -0.96
TNFRSF4-202ENST00000453580 H3BMG7 143 aa9.06□□□□□ -0.96
TNFRSF4-202ENST00000453580 KRTAP9-6A0A140TA67 174 aa9.05□□□□□ -0.96
TNFRSF4-202ENST00000453580 FABP2P12104 132 aa9.05□□□□□ -0.96
TNFRSF4-202ENST00000453580 MT1HP80294 61 aa9.05□□□□□ -0.96
TNFRSF4-202ENST00000453580 FAM218AQ96MZ4 157 aa9.05□□□□□ -0.96
TNFRSF4-202ENST00000453580 DNAL4O96015 105 aa9.04□□□□□ -0.96
TNFRSF4-202ENST00000453580 COX6CP09669 75 aa9.03□□□□□ -0.96
TNFRSF4-202ENST00000453580 A0A087WSZ3 146 aa9.01□□□□□ -0.97
TNFRSF4-202ENST00000453580 Q96NJ1 140 aa9.01□□□□□ -0.97
TNFRSF4-202ENST00000453580 M0R2T5 61 aa9□□□□□ -0.97
TNFRSF4-202ENST00000453580 FXYD2P54710 66 aa9□□□□□ -0.97
TNFRSF4-202ENST00000453580 HSD52Q0P140 79 aa9□□□□□ -0.97
TNFRSF4-202ENST00000453580 ORMDL1Q9P0S3 153 aa9□□□□□ -0.97
TNFRSF4-202ENST00000453580 TRIAP1O43715 76 aa8.99□□□□□ -0.97
TNFRSF4-202ENST00000453580 PSMB2P49721 201 aa8.99□□□□□ -0.97
TNFRSF4-202ENST00000453580 TMEM256-PLSCR3K7ERE1 68 aa8.97□□□□□ -0.97
TNFRSF4-202ENST00000453580 ANKRD29Q8N6D5 301 aa8.97□□□□□ -0.97
TNFRSF4-202ENST00000453580 TRBV7-4A0A0J9YYF1 115 aa8.94□□□□□ -0.98
TNFRSF4-202ENST00000453580 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
TNFRSF4-202ENST00000453580 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
TNFRSF4-202ENST00000453580 SIGMAR1Q99720 223 aa8.92□□□□□ -0.98
TNFRSF4-202ENST00000453580 UQCR10Q9UDW1 63 aa8.92□□□□□ -0.98
TNFRSF4-202ENST00000453580 A0A1W2PNM2 257 aa8.91□□□□□ -0.98
TNFRSF4-202ENST00000453580 A8MUU9 505 aa8.91□□□□□ -0.98
TNFRSF4-202ENST00000453580 KRTAP10-6P60371 365 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF4-202ENST00000453580 TRBV20-1A0A075B6N2 111 aa8.89□□□□□ -0.99
TNFRSF4-202ENST00000453580 LORP23490 312 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF4-202ENST00000453580 LINC00313P59037 77 aa8.88□□□□□ -0.99
TNFRSF4-202ENST00000453580 UBE2V1Q13404 147 aa8.88□□□□□ -0.99
TNFRSF4-202ENST00000453580 TRACP01848 142 aa8.87□□□□□ -0.99
TNFRSF4-202ENST00000453580 IGKV4-1P06312 121 aa8.87□□□□□ -0.99
TNFRSF4-202ENST00000453580 K7ERJ3 54 aa8.86□□□□□ -0.99
TNFRSF4-202ENST00000453580 CCKP06307 115 aa8.86□□□□□ -0.99
TNFRSF4-202ENST00000453580 C21orf62-AS1Q17RA5 79 aa8.86□□□□□ -0.99
TNFRSF4-202ENST00000453580 SCGB1C2P0DMR2 95 aa8.85□□□□□ -0.99
TNFRSF4-202ENST00000453580 DSCR10P59022 87 aa8.84□□□□□ -0.99
TNFRSF4-202ENST00000453580 CRCT1Q9UGL9 99 aa8.83□□□□□ -1
TNFRSF4-202ENST00000453580 DSCR8Q96T75 97 aa8.82□□□□□ -1
TNFRSF4-202ENST00000453580 A0A1B0GV72 72 aa8.81□□□□□ -1
TNFRSF4-202ENST00000453580 RBM3P98179 157 aaKnown RBP8.81□□□□□ -1
TNFRSF4-202ENST00000453580 LINC00472Q9H8W2 130 aa8.79□□□□□ -1
TNFRSF4-202ENST00000453580 TMA7Q9Y2S6 64 aaKnown RBP8.78□□□□□ -1
TNFRSF4-202ENST00000453580 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
TNFRSF4-202ENST00000453580 VPS25Q9BRG1 176 aa8.76□□□□□ -1.01
TNFRSF4-202ENST00000453580 J3KT08 172 aa8.75□□□□□ -1.01
TNFRSF4-202ENST00000453580 IGHV6-1A0A0B4J1U7 121 aa8.74□□□□□ -1.01
TNFRSF4-202ENST00000453580 C9JAW5 83 aa8.74□□□□□ -1.01
TNFRSF4-202ENST00000453580 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
TNFRSF4-202ENST00000453580 M0R143 59 aa8.73□□□□□ -1.01
TNFRSF4-202ENST00000453580 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
TNFRSF4-202ENST00000453580 DEFB116Q30KQ4 102 aa8.73□□□□□ -1.01
TNFRSF4-202ENST00000453580 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
TNFRSF4-202ENST00000453580 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
TNFRSF4-202ENST00000453580 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
TNFRSF4-202ENST00000453580 A0A1B0GW54 56 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms