RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SNCGO76070 127 aa5.19□□□□□ -1.58
COL28A1-205ENST00000453441 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
COL28A1-205ENST00000453441 LINC00483Q53H64 154 aa5.19□□□□□ -1.58
COL28A1-205ENST00000453441 H0YGX0 51 aa5.18□□□□□ -1.58
COL28A1-205ENST00000453441 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
COL28A1-205ENST00000453441 Q1RN00 199 aa5.18□□□□□ -1.58
COL28A1-205ENST00000453441 CTAG1AP78358 180 aa5.17□□□□□ -1.58
COL28A1-205ENST00000453441 PRR26Q8N8Z3 221 aa5.17□□□□□ -1.58
COL28A1-205ENST00000453441 H7C2G1 150 aa5.16□□□□□ -1.58
COL28A1-205ENST00000453441 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
COL28A1-205ENST00000453441 SPRR1BP22528 89 aa5.16□□□□□ -1.58
COL28A1-205ENST00000453441 GAGE2AQ6NT46 116 aa5.16□□□□□ -1.58
COL28A1-205ENST00000453441 LINC00575Q6W349 94 aa5.16□□□□□ -1.58
COL28A1-205ENST00000453441 A0A1B0GX51 115 aa5.15□□□□□ -1.59
COL28A1-205ENST00000453441 hADV29S1A0JD25 119 aa5.15□□□□□ -1.59
COL28A1-205ENST00000453441 COX6CP09669 75 aa5.15□□□□□ -1.59
COL28A1-205ENST00000453441 TYMSOSQ8TAI1 123 aa5.15□□□□□ -1.59
COL28A1-205ENST00000453441 IGLV5-48A0A075B6I7 105 aa5.14□□□□□ -1.59
COL28A1-205ENST00000453441 A0A087X002 238 aa5.14□□□□□ -1.59
COL28A1-205ENST00000453441 TEX49A0A1B0GTD5 131 aa5.14□□□□□ -1.59
COL28A1-205ENST00000453441 OCIAD2Q56VL3 154 aa5.14□□□□□ -1.59
COL28A1-205ENST00000453441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.14□□□□□ -1.59
COL28A1-205ENST00000453441 PPDPFLQ8WWR9 84 aa5.14□□□□□ -1.59
COL28A1-205ENST00000453441 PSMB2P49721 201 aa5.13□□□□□ -1.59
COL28A1-205ENST00000453441 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
COL28A1-205ENST00000453441 LAMTOR3Q9UHA4 124 aa5.13□□□□□ -1.59
COL28A1-205ENST00000453441 HERC1Q15751 4861 aa5.13□□□□□ -1.59
COL28A1-205ENST00000453441 K7ERJ3 54 aa5.12□□□□□ -1.59
COL28A1-205ENST00000453441 KRTAP13-2Q52LG2 175 aa5.12□□□□□ -1.59
COL28A1-205ENST00000453441 SPAG11AQ6PDA7 123 aa5.12□□□□□ -1.59
COL28A1-205ENST00000453441 ST20-AS1Q8NBB2 130 aa5.12□□□□□ -1.59
COL28A1-205ENST00000453441 ANAPC11Q9NYG5 84 aa5.12□□□□□ -1.59
COL28A1-205ENST00000453441 H3BQ85 93 aa5.11□□□□□ -1.59
COL28A1-205ENST00000453441 TSPAN13O95857 204 aa5.11□□□□□ -1.59
COL28A1-205ENST00000453441 Q8NBF4 154 aa5.11□□□□□ -1.59
COL28A1-205ENST00000453441 Q6ZQY7 126 aa5.1□□□□□ -1.59
COL28A1-205ENST00000453441 LINC00304Q8N9R0 145 aa5.1□□□□□ -1.59
COL28A1-205ENST00000453441 IGLV9-49A0A0B4J1Y8 123 aa5.09□□□□□ -1.59
COL28A1-205ENST00000453441 F8WEM9 126 aa5.09□□□□□ -1.59
COL28A1-205ENST00000453441 DNAL4O96015 105 aa5.09□□□□□ -1.59
COL28A1-205ENST00000453441 LINC01547P58512 204 aaPredicted RBP5.09□□□□□ -1.59
COL28A1-205ENST00000453441 MOBPQ13875 183 aa5.09□□□□□ -1.59
COL28A1-205ENST00000453441 C9orf153Q5TBE3 101 aa5.09□□□□□ -1.59
COL28A1-205ENST00000453441 LYRM7Q5U5X0 104 aa5.09□□□□□ -1.59
COL28A1-205ENST00000453441 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.59
COL28A1-205ENST00000453441 DEFB105AQ8NG35 78 aa5.09□□□□□ -1.59
COL28A1-205ENST00000453441 RPS29P62273 56 aaKnown RBP5.08□□□□□ -1.6
COL28A1-205ENST00000453441 Q8N377 158 aa5.08□□□□□ -1.6
COL28A1-205ENST00000453441 SPINK1P00995 79 aa5.07□□□□□ -1.6
COL28A1-205ENST00000453441 TRACP01848 142 aa5.07□□□□□ -1.6
COL28A1-205ENST00000453441 SCGB1C2P0DMR2 95 aa5.07□□□□□ -1.6
COL28A1-205ENST00000453441 FAM218AQ96MZ4 157 aa5.07□□□□□ -1.6
COL28A1-205ENST00000453441 BATFQ16520 125 aa5.06□□□□□ -1.6
COL28A1-205ENST00000453441 SMIM29Q86T20 159 aa5.06□□□□□ -1.6
COL28A1-205ENST00000453441 SNHG12Q9BXW3 62 aa5.06□□□□□ -1.6
COL28A1-205ENST00000453441 LST1O00453 97 aa5.05□□□□□ -1.6
COL28A1-205ENST00000453441 CD164Q04900 197 aa5.05□□□□□ -1.6
COL28A1-205ENST00000453441 Q6JHZ5 121 aa5.05□□□□□ -1.6
COL28A1-205ENST00000453441 CLEC2BQ92478 149 aa5.05□□□□□ -1.6
COL28A1-205ENST00000453441 ORMDL1Q9P0S3 153 aa5.05□□□□□ -1.6
COL28A1-205ENST00000453441 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
COL28A1-205ENST00000453441 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
COL28A1-205ENST00000453441 TRBV20-1A0A075B6N2 111 aa5.03□□□□□ -1.6
COL28A1-205ENST00000453441 TMEM256-PLSCR3K7ERE1 68 aa5.03□□□□□ -1.6
COL28A1-205ENST00000453441 ATXN8Q156A1 80 aa5.03□□□□□ -1.6
COL28A1-205ENST00000453441 COL5A1-AS1Q5SY13 56 aa5.02□□□□□ -1.61
COL28A1-205ENST00000453441 LIMD2Q9BT23 127 aa5.02□□□□□ -1.61
COL28A1-205ENST00000453441 FABP2P12104 132 aa5.01□□□□□ -1.61
COL28A1-205ENST00000453441 NDUFV3P56181 108 aaKnown RBP5.01□□□□□ -1.61
COL28A1-205ENST00000453441 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
COL28A1-205ENST00000453441 H3BUT2 72 aa5□□□□□ -1.61
COL28A1-205ENST00000453441 Q5XG85 94 aa5□□□□□ -1.61
COL28A1-205ENST00000453441 FP248Q71RG6 208 aaPredicted RBP5□□□□□ -1.61
COL28A1-205ENST00000453441 A0A1W2PPM0 123 aa4.99□□□□□ -1.61
COL28A1-205ENST00000453441 TAX1BP3O14907 124 aa4.99□□□□□ -1.61
COL28A1-205ENST00000453441 TCL1BO95988 128 aa4.99□□□□□ -1.61
COL28A1-205ENST00000453441 H3BMG7 143 aa4.98□□□□□ -1.61
COL28A1-205ENST00000453441 NAA38Q9BRA0 125 aaKnown RBP4.98□□□□□ -1.61
COL28A1-205ENST00000453441 PCP4L1A6NKN8 68 aa4.97□□□□□ -1.61
COL28A1-205ENST00000453441 Q6Q795 121 aa4.97□□□□□ -1.61
COL28A1-205ENST00000453441 IGFL1Q6UW32 110 aa4.97□□□□□ -1.61
COL28A1-205ENST00000453441 BAALC-AS2P0C853 105 aa4.96□□□□□ -1.62
COL28A1-205ENST00000453441 PRR4Q16378 134 aa4.96□□□□□ -1.62
COL28A1-205ENST00000453441 ANKRD29Q8N6D5 301 aa4.96□□□□□ -1.62
COL28A1-205ENST00000453441 TRBV7-7A0A0K0K1E9 115 aa4.95□□□□□ -1.62
COL28A1-205ENST00000453441 JMJD7-PLA2G4BH0Y9G9 81 aa4.95□□□□□ -1.62
COL28A1-205ENST00000453441 TEN1Q86WV5 123 aa4.95□□□□□ -1.62
COL28A1-205ENST00000453441 SS18L2Q9UHA2 77 aa4.95□□□□□ -1.62
COL28A1-205ENST00000453441 H3BT86 120 aa4.94□□□□□ -1.62
COL28A1-205ENST00000453441 RBM3P98179 157 aaKnown RBP4.94□□□□□ -1.62
COL28A1-205ENST00000453441 ASB16-AS1Q495Z4 193 aa4.94□□□□□ -1.62
COL28A1-205ENST00000453441 HRCT1Q6UXD1 115 aa4.94□□□□□ -1.62
COL28A1-205ENST00000453441 SPCS1Q9Y6A9 102 aa4.94□□□□□ -1.62
COL28A1-205ENST00000453441 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
COL28A1-205ENST00000453441 C9JAW5 83 aa4.93□□□□□ -1.62
COL28A1-205ENST00000453441 DSCR8Q96T75 97 aa4.93□□□□□ -1.62
COL28A1-205ENST00000453441 TRBV7-4A0A0J9YYF1 115 aa4.92□□□□□ -1.62
COL28A1-205ENST00000453441 PDE6GP18545 87 aa4.92□□□□□ -1.62
COL28A1-205ENST00000453441 TPRXLQ17RH7 258 aa4.92□□□□□ -1.62
COL28A1-205ENST00000453441 RETNLBQ9BQ08 111 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms