RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 DOPEY1Q5JWR5 2465 aa4.71□□□□□ -1.65
RIF1-206ENST00000453091 COX6B2Q6YFQ2 88 aa4.71□□□□□ -1.66
RIF1-206ENST00000453091 LINC01558Q9Y6Z2 57 aa4.71□□□□□ -1.66
RIF1-206ENST00000453091 COL6A3P12111 3177 aa4.71□□□□□ -1.66
RIF1-206ENST00000453091 MGAQ8IWI9 3026 aa4.7□□□□□ -1.66
RIF1-206ENST00000453091 VPS13AQ96RL7 3174 aa4.7□□□□□ -1.66
RIF1-206ENST00000453091 LINC00472Q9H8W2 130 aa4.69□□□□□ -1.66
RIF1-206ENST00000453091 A8MU10 97 aa4.69□□□□□ -1.66
RIF1-206ENST00000453091 FREM2Q5SZK8 3169 aa4.69□□□□□ -1.66
RIF1-206ENST00000453091 Q5W150 140 aa4.69□□□□□ -1.66
RIF1-206ENST00000453091 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
RIF1-206ENST00000453091 CSAG1Q6PB30 78 aa4.68□□□□□ -1.66
RIF1-206ENST00000453091 PRRC2CQ9Y520 2896 aaKnown RBP4.67□□□□□ -1.66
RIF1-206ENST00000453091 A0A087X002 238 aa4.67□□□□□ -1.66
RIF1-206ENST00000453091 NOTCH2NLQ7Z3S9 236 aa4.67□□□□□ -1.66
RIF1-206ENST00000453091 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
RIF1-206ENST00000453091 EYSQ5T1H1 3165 aa4.67□□□□□ -1.66
RIF1-206ENST00000453091 USP34Q70CQ2 3546 aa4.65□□□□□ -1.67
RIF1-206ENST00000453091 A0A1B0GU33 70 aa4.64□□□□□ -1.67
RIF1-206ENST00000453091 EPG5Q9HCE0 2579 aa4.64□□□□□ -1.67
RIF1-206ENST00000453091 H3BS24 57 aa4.64□□□□□ -1.67
RIF1-206ENST00000453091 SPTBN5Q9NRC6 3674 aaKnown RBP4.64□□□□□ -1.67
RIF1-206ENST00000453091 KRTAP10-1P60331 282 aa4.64□□□□□ -1.67
RIF1-206ENST00000453091 AKAP13Q12802 2813 aa4.63□□□□□ -1.67
RIF1-206ENST00000453091 KRTAP7-1Q8IUC3 87 aa4.62□□□□□ -1.67
RIF1-206ENST00000453091 KRTAP4-16G5E9R7 235 aaPredicted RBP4.61□□□□□ -1.67
RIF1-206ENST00000453091 ZCCHC13Q8WW36 166 aaKnown RBP4.61□□□□□ -1.67
RIF1-206ENST00000453091 PLAC8Q9NZF1 115 aa4.6□□□□□ -1.67
RIF1-206ENST00000453091 ANKRD17O75179 2603 aaKnown RBP4.6□□□□□ -1.67
RIF1-206ENST00000453091 SPRR1BP22528 89 aa4.6□□□□□ -1.67
RIF1-206ENST00000453091 KRTAP29-1A8MX34 341 aaPredicted RBP4.59□□□□□ -1.67
RIF1-206ENST00000453091 MYO15AQ9UKN7 3530 aa4.59□□□□□ -1.67
RIF1-206ENST00000453091 SPATA8Q6RVD6 105 aa4.59□□□□□ -1.67
RIF1-206ENST00000453091 LAMA1P25391 3075 aa4.59□□□□□ -1.67
RIF1-206ENST00000453091 ADM2Q7Z4H4 148 aa4.59□□□□□ -1.68
RIF1-206ENST00000453091 F8P00451 2351 aa4.59□□□□□ -1.68
RIF1-206ENST00000453091 TRANK1O15050 2925 aa4.57□□□□□ -1.68
RIF1-206ENST00000453091 CR1P17927 2039 aa4.54□□□□□ -1.68
RIF1-206ENST00000453091 Q6ZSA8 131 aa4.54□□□□□ -1.68
RIF1-206ENST00000453091 CFAP47Q6ZTR5 3102 aa4.53□□□□□ -1.68
RIF1-206ENST00000453091 Q6ZR54 194 aa4.51□□□□□ -1.69
RIF1-206ENST00000453091 Q5VSD8 79 aa4.51□□□□□ -1.69
RIF1-206ENST00000453091 S4R3F8 94 aa4.51□□□□□ -1.69
RIF1-206ENST00000453091 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
RIF1-206ENST00000453091 FRYQ5TBA9 3013 aa4.49□□□□□ -1.69
RIF1-206ENST00000453091 FLNBO75369 2602 aaKnown RBP4.49□□□□□ -1.69
RIF1-206ENST00000453091 LINC00483Q53H64 154 aa4.49□□□□□ -1.69
RIF1-206ENST00000453091 MGAM2Q2M2H8 2515 aa4.48□□□□□ -1.69
RIF1-206ENST00000453091 A6NN06 94 aa4.48□□□□□ -1.69
RIF1-206ENST00000453091 FRYLO94915 3013 aa4.48□□□□□ -1.69
RIF1-206ENST00000453091 BOD1L1Q8NFC6 3051 aa4.48□□□□□ -1.69
RIF1-206ENST00000453091 ATMQ13315 3056 aa4.48□□□□□ -1.69
RIF1-206ENST00000453091 CAMK2N1Q7Z7J9 78 aa4.47□□□□□ -1.69
RIF1-206ENST00000453091 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
RIF1-206ENST00000453091 FLNAP21333 2647 aaKnown RBP4.46□□□□□ -1.7
RIF1-206ENST00000453091 M0R2T5 61 aa4.46□□□□□ -1.7
RIF1-206ENST00000453091 ITPR3Q14573 2671 aa4.46□□□□□ -1.7
RIF1-206ENST00000453091 LCE6AA0A183 80 aa4.43□□□□□ -1.7
RIF1-206ENST00000453091 ROMO1P60602 79 aa4.42□□□□□ -1.7
RIF1-206ENST00000453091 DSPP15924 2871 aaKnown RBP4.42□□□□□ -1.7
RIF1-206ENST00000453091 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
RIF1-206ENST00000453091 KRTAP13-2Q52LG2 175 aa4.41□□□□□ -1.7
RIF1-206ENST00000453091 REV3LO60673 3130 aa4.41□□□□□ -1.7
RIF1-206ENST00000453091 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
RIF1-206ENST00000453091 NBEAQ8NFP9 2946 aa4.39□□□□□ -1.71
RIF1-206ENST00000453091 ADGRG4Q8IZF6 3080 aa4.39□□□□□ -1.71
RIF1-206ENST00000453091 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
RIF1-206ENST00000453091 TACC2O95359 2948 aa4.38□□□□□ -1.71
RIF1-206ENST00000453091 M0QZ58 72 aa4.38□□□□□ -1.71
RIF1-206ENST00000453091 KALRNO60229 2985 aa4.38□□□□□ -1.71
RIF1-206ENST00000453091 ATRQ13535 2644 aa4.38□□□□□ -1.71
RIF1-206ENST00000453091 R4GN34 69 aa4.38□□□□□ -1.71
RIF1-206ENST00000453091 COL12A1Q99715 3063 aa4.37□□□□□ -1.71
RIF1-206ENST00000453091 KRTAP13-1Q8IUC0 172 aa4.36□□□□□ -1.71
RIF1-206ENST00000453091 ZFHX4Q86UP3 3567 aa4.36□□□□□ -1.71
RIF1-206ENST00000453091 NBEAL2Q6ZNJ1 2754 aa4.35□□□□□ -1.71
RIF1-206ENST00000453091 DMXL2Q8TDJ6 3036 aa4.34□□□□□ -1.71
RIF1-206ENST00000453091 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
RIF1-206ENST00000453091 USP24Q9UPU5 2620 aa4.34□□□□□ -1.72
RIF1-206ENST00000453091 DCHS1Q96JQ0 3298 aa4.33□□□□□ -1.72
RIF1-206ENST00000453091 ZNF292O60281 2723 aa4.33□□□□□ -1.72
RIF1-206ENST00000453091 LOC400499M0QZD8 3231 aa4.32□□□□□ -1.72
RIF1-206ENST00000453091 ASPMQ8IZT6 3477 aa4.32□□□□□ -1.72
RIF1-206ENST00000453091 CFAP46Q8IYW2 2715 aa4.31□□□□□ -1.72
RIF1-206ENST00000453091 HELZ2Q9BYK8 2649 aaKnown RBP4.31□□□□□ -1.72
RIF1-206ENST00000453091 RELNP78509 3460 aa4.31□□□□□ -1.72
RIF1-206ENST00000453091 LRBAP50851 2863 aa4.31□□□□□ -1.72
RIF1-206ENST00000453091 CENPEQ02224 2701 aa4.3□□□□□ -1.72
RIF1-206ENST00000453091 CHD6Q8TD26 2715 aa4.3□□□□□ -1.72
RIF1-206ENST00000453091 TNRC18O15417 2968 aaPredicted RBP4.29□□□□□ -1.72
RIF1-206ENST00000453091 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
RIF1-206ENST00000453091 MAST4O15021 2626 aa4.28□□□□□ -1.72
RIF1-206ENST00000453091 GCN1Q92616 2671 aaKnown RBP4.28□□□□□ -1.72
RIF1-206ENST00000453091 TEP1Q99973 2627 aaKnown RBP4.28□□□□□ -1.72
RIF1-206ENST00000453091 WDFY3Q8IZQ1 3526 aa4.27□□□□□ -1.73
RIF1-206ENST00000453091 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
RIF1-206ENST00000453091 IGSF10Q6WRI0 2623 aa4.27□□□□□ -1.73
RIF1-206ENST00000453091 DMXL1Q9Y485 3027 aa4.27□□□□□ -1.73
RIF1-206ENST00000453091 MAP1AP78559 2803 aaPredicted RBP4.26□□□□□ -1.73
RIF1-206ENST00000453091 ZZEF1O43149 2961 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms