RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 DMXL2Q8TDJ6 3036 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 HIVEP3Q5T1R4 2406 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 SPG11Q96JI7 2443 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 A8MTW9 85 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 LY6EQ16553 131 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 BRD3OSQ6XYD6 125 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 MTORP42345 2549 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 FRYLO94915 3013 aa3.01□□□□□ -1.93
EPHA3-202ENST00000452448 TRGV1A0A0A0MS02 117 aa3.01□□□□□ -1.93
EPHA3-202ENST00000452448 KRTAP10-9P60411 292 aa3.01□□□□□ -1.93
EPHA3-202ENST00000452448 SPINK13Q1W4C9 94 aa3.01□□□□□ -1.93
EPHA3-202ENST00000452448 ABCA1O95477 2261 aa3.01□□□□□ -1.93
EPHA3-202ENST00000452448 HRES1P13985 223 aa3□□□□□ -1.93
EPHA3-202ENST00000452448 TLN1Q9Y490 2541 aaKnown RBP3□□□□□ -1.93
EPHA3-202ENST00000452448 HIVEP1P15822 2718 aa3□□□□□ -1.93
EPHA3-202ENST00000452448 PKDREJQ9NTG1 2253 aa3□□□□□ -1.93
EPHA3-202ENST00000452448 CCL19Q99731 98 aa3□□□□□ -1.93
EPHA3-202ENST00000452448 NF1P21359 2839 aa3□□□□□ -1.93
EPHA3-202ENST00000452448 ANKHD1Q8IWZ3 2542 aaKnown RBP3□□□□□ -1.93
EPHA3-202ENST00000452448 ITPR2Q14571 2701 aa3□□□□□ -1.93
EPHA3-202ENST00000452448 NBASA2RRP1 2371 aa3□□□□□ -1.93
EPHA3-202ENST00000452448 OTOGQ6ZRI0 2925 aa3□□□□□ -1.93
EPHA3-202ENST00000452448 SETD2Q9BYW2 2564 aaPredicted RBP3□□□□□ -1.93
EPHA3-202ENST00000452448 IGKV2D-24A0A075B6R9 120 aa2.99□□□□□ -1.93
EPHA3-202ENST00000452448 GIG44P09565 113 aaPredicted RBP2.99□□□□□ -1.93
EPHA3-202ENST00000452448 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
EPHA3-202ENST00000452448 C16orf74Q96GX8 76 aa2.99□□□□□ -1.93
EPHA3-202ENST00000452448 VPS13AQ96RL7 3174 aa2.98□□□□□ -1.93
EPHA3-202ENST00000452448 K7EQZ3 153 aa2.98□□□□□ -1.93
EPHA3-202ENST00000452448 FLNCQ14315 2725 aa2.98□□□□□ -1.93
EPHA3-202ENST00000452448 FN1P02751 2386 aaKnown RBP2.98□□□□□ -1.93
EPHA3-202ENST00000452448 MGAQ8IWI9 3026 aa2.98□□□□□ -1.93
EPHA3-202ENST00000452448 DSCR10P59022 87 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 DEFB131AP59861 70 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 DEFB116Q30KQ4 102 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 Q8IZM0 81 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 ROS1P08922 2347 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 PDZD2O15018 2839 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 A0A0J9YWU9 116 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 Q96NJ1 140 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 CELSR3Q9NYQ7 3312 aa2.97□□□□□ -1.93
EPHA3-202ENST00000452448 NBDYA0A0U1RRE5 68 aa2.96□□□□□ -1.93
EPHA3-202ENST00000452448 DMDP11532 3685 aa2.96□□□□□ -1.94
EPHA3-202ENST00000452448 PCOTHQ58A44 107 aa2.96□□□□□ -1.94
EPHA3-202ENST00000452448 WFDC13Q8IUB5 93 aa2.96□□□□□ -1.94
EPHA3-202ENST00000452448 C4orf3Q8WVX3 66 aa2.96□□□□□ -1.94
EPHA3-202ENST00000452448 TOMM7Q9P0U1 55 aa2.96□□□□□ -1.94
EPHA3-202ENST00000452448 HTN1P15515 57 aa2.95□□□□□ -1.94
EPHA3-202ENST00000452448 SPENQ96T58 3664 aaKnown RBP2.95□□□□□ -1.94
EPHA3-202ENST00000452448 SSBP3-AS1Q7Z2R9 100 aa2.95□□□□□ -1.94
EPHA3-202ENST00000452448 LINC00304Q8N9R0 145 aa2.95□□□□□ -1.94
EPHA3-202ENST00000452448 DEFB131BA0A096LNP1 70 aa2.94□□□□□ -1.94
EPHA3-202ENST00000452448 KRTAP24-1Q3LI83 254 aa2.94□□□□□ -1.94
EPHA3-202ENST00000452448 C10orf99Q6UWK7 81 aa2.94□□□□□ -1.94
EPHA3-202ENST00000452448 WFDC10BQ8IUB3 73 aa2.94□□□□□ -1.94
EPHA3-202ENST00000452448 DNHD1Q96M86 4753 aa2.94□□□□□ -1.94
EPHA3-202ENST00000452448 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
EPHA3-202ENST00000452448 CRIPTQ9P021 101 aa2.93□□□□□ -1.94
EPHA3-202ENST00000452448 CSPG4Q6UVK1 2322 aa2.93□□□□□ -1.94
EPHA3-202ENST00000452448 RP1L1Q8IWN7 2480 aaPredicted RBP2.93□□□□□ -1.94
EPHA3-202ENST00000452448 SMR3AQ99954 134 aa2.93□□□□□ -1.94
EPHA3-202ENST00000452448 LOC400499M0QZD8 3231 aa2.92□□□□□ -1.94
EPHA3-202ENST00000452448 A0A1B0GUV1 79 aa2.92□□□□□ -1.94
EPHA3-202ENST00000452448 WNK2Q9Y3S1 2297 aa2.92□□□□□ -1.94
EPHA3-202ENST00000452448 APCP25054 2843 aa2.92□□□□□ -1.94
EPHA3-202ENST00000452448 A0A1B0GU33 70 aa2.91□□□□□ -1.94
EPHA3-202ENST00000452448 BSNQ9UPA5 3926 aa2.91□□□□□ -1.94
EPHA3-202ENST00000452448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.91□□□□□ -1.94
EPHA3-202ENST00000452448 COX17Q14061 63 aa2.91□□□□□ -1.94
EPHA3-202ENST00000452448 FBN1P35555 2871 aaKnown RBP2.91□□□□□ -1.94
EPHA3-202ENST00000452448 SMG1Q96Q15 3661 aaKnown RBP2.91□□□□□ -1.94
EPHA3-202ENST00000452448 KRTAP29-1A8MX34 341 aaPredicted RBP2.9□□□□□ -1.94
EPHA3-202ENST00000452448 DEFB136Q30KP8 78 aa2.9□□□□□ -1.94
EPHA3-202ENST00000452448 TYMSOSQ8TAI1 123 aa2.9□□□□□ -1.95
EPHA3-202ENST00000452448 A0A1W2PNN7 141 aa2.89□□□□□ -1.95
EPHA3-202ENST00000452448 IGLV7-43P04211 117 aa2.89□□□□□ -1.95
EPHA3-202ENST00000452448 RPL37AP61513 92 aaKnown RBP2.89□□□□□ -1.95
EPHA3-202ENST00000452448 LRBAP50851 2863 aa2.89□□□□□ -1.95
EPHA3-202ENST00000452448 PRRC2CQ9Y520 2896 aaKnown RBP2.89□□□□□ -1.95
EPHA3-202ENST00000452448 FAM168BA1KXE4 195 aa2.89□□□□□ -1.95
EPHA3-202ENST00000452448 ACYP2P14621 99 aa2.89□□□□□ -1.95
EPHA3-202ENST00000452448 KRTAP11-1Q8IUC1 163 aa2.89□□□□□ -1.95
EPHA3-202ENST00000452448 NOP10Q9NPE3 64 aaKnown RBP2.89□□□□□ -1.95
EPHA3-202ENST00000452448 KRTAP1-1Q07627 177 aa2.88□□□□□ -1.95
EPHA3-202ENST00000452448 CCDC168Q8NDH2 2452 aa2.88□□□□□ -1.95
EPHA3-202ENST00000452448 ADGRG4Q8IZF6 3080 aa2.87□□□□□ -1.95
EPHA3-202ENST00000452448 JMJD1CQ15652 2540 aa2.87□□□□□ -1.95
EPHA3-202ENST00000452448 HIVEP2P31629 2446 aa2.87□□□□□ -1.95
EPHA3-202ENST00000452448 IGLV6-57P01721 117 aa2.86□□□□□ -1.95
EPHA3-202ENST00000452448 ASPMQ8IZT6 3477 aa2.86□□□□□ -1.95
EPHA3-202ENST00000452448 IGLV5-48A0A075B6I7 105 aa2.86□□□□□ -1.95
EPHA3-202ENST00000452448 BOD1L1Q8NFC6 3051 aa2.86□□□□□ -1.95
EPHA3-202ENST00000452448 ATRQ13535 2644 aa2.85□□□□□ -1.95
EPHA3-202ENST00000452448 NBPF19A0A087WUL8 3843 aa2.85□□□□□ -1.95
EPHA3-202ENST00000452448 MAPK1IP1LQ8NDC0 245 aa2.85□□□□□ -1.95
EPHA3-202ENST00000452448 STAB1Q9NY15 2570 aa2.85□□□□□ -1.95
EPHA3-202ENST00000452448 IGKV2-24A0A0C4DH68 120 aa2.85□□□□□ -1.95
EPHA3-202ENST00000452448 C6orf48Q9UBA6 75 aa2.84□□□□□ -1.95
EPHA3-202ENST00000452448 COL6A5A8TX70 2615 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms