RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 C9orf153Q5TBE3 101 aa6.98□□□□□ -1.29
CPSF4-208ENST00000452047 LYRM7Q5U5X0 104 aa6.98□□□□□ -1.29
CPSF4-208ENST00000452047 SCGB1D4Q6XE38 83 aa6.98□□□□□ -1.29
CPSF4-208ENST00000452047 SLC25A20O43772 301 aa6.97□□□□□ -1.29
CPSF4-208ENST00000452047 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
CPSF4-208ENST00000452047 K7ERJ3 54 aa6.96□□□□□ -1.3
CPSF4-208ENST00000452047 ELOF1P60002 83 aaKnown RBP6.96□□□□□ -1.3
CPSF4-208ENST00000452047 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
CPSF4-208ENST00000452047 C6orf99Q4VX62 202 aa6.95□□□□□ -1.3
CPSF4-208ENST00000452047 KRTAP9-6A0A140TA67 174 aa6.94□□□□□ -1.3
CPSF4-208ENST00000452047 NAA38Q9BRA0 125 aaKnown RBP6.94□□□□□ -1.3
CPSF4-208ENST00000452047 VPS25Q9BRG1 176 aa6.94□□□□□ -1.3
CPSF4-208ENST00000452047 J3QR89 54 aa6.93□□□□□ -1.3
CPSF4-208ENST00000452047 COX7BP24311 80 aa6.93□□□□□ -1.3
CPSF4-208ENST00000452047 IFITM1P13164 125 aa6.92□□□□□ -1.3
CPSF4-208ENST00000452047 PCP4P48539 62 aa6.92□□□□□ -1.3
CPSF4-208ENST00000452047 TRBV20-1A0A075B6N2 111 aa6.91□□□□□ -1.3
CPSF4-208ENST00000452047 TRBV7-6A0A0J9YX20 115 aa6.91□□□□□ -1.3
CPSF4-208ENST00000452047 COPS9Q8WXC6 57 aa6.91□□□□□ -1.3
CPSF4-208ENST00000452047 A0A0B4J2C4 111 aa6.9□□□□□ -1.3
CPSF4-208ENST00000452047 XP32Q5T750 250 aa6.9□□□□□ -1.3
CPSF4-208ENST00000452047 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
CPSF4-208ENST00000452047 LAMTOR3Q9UHA4 124 aa6.9□□□□□ -1.3
CPSF4-208ENST00000452047 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
CPSF4-208ENST00000452047 MUSTN1Q8IVN3 82 aa6.89□□□□□ -1.31
CPSF4-208ENST00000452047 PRO0461Q9UI25 63 aa6.89□□□□□ -1.31
CPSF4-208ENST00000452047 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-208ENST00000452047 Q1RN00 199 aa6.88□□□□□ -1.31
CPSF4-208ENST00000452047 LIMD2Q9BT23 127 aa6.88□□□□□ -1.31
CPSF4-208ENST00000452047 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
CPSF4-208ENST00000452047 IGLV5-48A0A075B6I7 105 aa6.87□□□□□ -1.31
CPSF4-208ENST00000452047 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
CPSF4-208ENST00000452047 H3BMG7 143 aa6.87□□□□□ -1.31
CPSF4-208ENST00000452047 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
CPSF4-208ENST00000452047 CFC1P0CG37 223 aa6.87□□□□□ -1.31
CPSF4-208ENST00000452047 HRCT1Q6UXD1 115 aa6.87□□□□□ -1.31
CPSF4-208ENST00000452047 SMIM29Q86T20 159 aa6.87□□□□□ -1.31
CPSF4-208ENST00000452047 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
CPSF4-208ENST00000452047 CD164Q04900 197 aa6.85□□□□□ -1.31
CPSF4-208ENST00000452047 TRAV13-2A0A0B4J235 113 aa6.84□□□□□ -1.31
CPSF4-208ENST00000452047 A4D1N5 150 aa6.84□□□□□ -1.31
CPSF4-208ENST00000452047 SCGB1A1P11684 91 aa6.84□□□□□ -1.31
CPSF4-208ENST00000452047 SMIM11BQ8TCY0 68 aa6.84□□□□□ -1.31
CPSF4-208ENST00000452047 PSMB2P49721 201 aa6.82□□□□□ -1.32
CPSF4-208ENST00000452047 ETDBQ3ZM63 59 aa6.82□□□□□ -1.32
CPSF4-208ENST00000452047 Q5XG85 94 aa6.82□□□□□ -1.32
CPSF4-208ENST00000452047 H7C2G1 150 aa6.81□□□□□ -1.32
CPSF4-208ENST00000452047 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
CPSF4-208ENST00000452047 TCL1BO95988 128 aa6.8□□□□□ -1.32
CPSF4-208ENST00000452047 SCGB1C2P0DMR2 95 aa6.8□□□□□ -1.32
CPSF4-208ENST00000452047 TEN1Q86WV5 123 aa6.8□□□□□ -1.32
CPSF4-208ENST00000452047 PPDPFLQ8WWR9 84 aa6.8□□□□□ -1.32
CPSF4-208ENST00000452047 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
CPSF4-208ENST00000452047 ATXN8Q156A1 80 aa6.79□□□□□ -1.32
CPSF4-208ENST00000452047 SIGMAR1Q99720 223 aa6.79□□□□□ -1.32
CPSF4-208ENST00000452047 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
CPSF4-208ENST00000452047 COX6CP09669 75 aa6.78□□□□□ -1.32
CPSF4-208ENST00000452047 C1orf195Q5TG92 126 aa6.78□□□□□ -1.32
CPSF4-208ENST00000452047 C21orf62-AS1Q17RA5 79 aa6.77□□□□□ -1.33
CPSF4-208ENST00000452047 LINC00575Q6W349 94 aa6.77□□□□□ -1.33
CPSF4-208ENST00000452047 PCOTHQ58A44 107 aa6.75□□□□□ -1.33
CPSF4-208ENST00000452047 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
CPSF4-208ENST00000452047 H3BT86 120 aa6.74□□□□□ -1.33
CPSF4-208ENST00000452047 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
CPSF4-208ENST00000452047 Q6ZQY7 126 aa6.74□□□□□ -1.33
CPSF4-208ENST00000452047 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
CPSF4-208ENST00000452047 hADV29S1A0JD25 119 aa6.73□□□□□ -1.33
CPSF4-208ENST00000452047 TRIAP1O43715 76 aa6.73□□□□□ -1.33
CPSF4-208ENST00000452047 MTURNQ8N3F0 131 aa6.73□□□□□ -1.33
CPSF4-208ENST00000452047 IGLV8-61A0A075B6I0 122 aa6.72□□□□□ -1.33
CPSF4-208ENST00000452047 C9JAW5 83 aa6.72□□□□□ -1.33
CPSF4-208ENST00000452047 F8WEM9 126 aa6.72□□□□□ -1.33
CPSF4-208ENST00000452047 LST1O00453 97 aa6.71□□□□□ -1.34
CPSF4-208ENST00000452047 Q6JHZ5 121 aa6.69□□□□□ -1.34
CPSF4-208ENST00000452047 IGFL1Q6UW32 110 aa6.69□□□□□ -1.34
CPSF4-208ENST00000452047 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.69□□□□□ -1.34
CPSF4-208ENST00000452047 CLEC2BQ92478 149 aa6.69□□□□□ -1.34
CPSF4-208ENST00000452047 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
CPSF4-208ENST00000452047 TRBV7-7A0A0K0K1E9 115 aa6.67□□□□□ -1.34
CPSF4-208ENST00000452047 FAM240AA0A1B0GVK7 77 aa6.67□□□□□ -1.34
CPSF4-208ENST00000452047 TRACP01848 142 aa6.67□□□□□ -1.34
CPSF4-208ENST00000452047 MT1HP80294 61 aa6.65□□□□□ -1.34
CPSF4-208ENST00000452047 A0A1B0GV72 72 aa6.64□□□□□ -1.35
CPSF4-208ENST00000452047 ACYP1P07311 99 aa6.63□□□□□ -1.35
CPSF4-208ENST00000452047 SNCGO76070 127 aa6.62□□□□□ -1.35
CPSF4-208ENST00000452047 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
CPSF4-208ENST00000452047 Q6Q795 121 aa6.62□□□□□ -1.35
CPSF4-208ENST00000452047 H0YGX0 51 aa6.61□□□□□ -1.35
CPSF4-208ENST00000452047 FAM218AQ96MZ4 157 aa6.61□□□□□ -1.35
CPSF4-208ENST00000452047 MT-ATP8P03928 68 aa6.6□□□□□ -1.35
CPSF4-208ENST00000452047 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
CPSF4-208ENST00000452047 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
CPSF4-208ENST00000452047 OBSCN-AS1Q96MR7 158 aa6.57□□□□□ -1.36
CPSF4-208ENST00000452047 A0A1B0GX51 115 aa6.56□□□□□ -1.36
CPSF4-208ENST00000452047 Q75L30 129 aa6.56□□□□□ -1.36
CPSF4-208ENST00000452047 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
CPSF4-208ENST00000452047 BAALC-AS2P0C853 105 aa6.55□□□□□ -1.36
CPSF4-208ENST00000452047 NDUFV3P56181 108 aaKnown RBP6.55□□□□□ -1.36
CPSF4-208ENST00000452047 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
CPSF4-208ENST00000452047 IMUPQ9GZP8 106 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms