RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SPANXB1Q9NS25 103 aaPredicted RBP3.69□□□□□ -1.82
LINC01961-201ENST00000449954 DHRS4-AS1Q9P1J3 65 aa3.69□□□□□ -1.82
LINC01961-201ENST00000449954 MEIG1Q5JSS6 88 aa3.68□□□□□ -1.82
LINC01961-201ENST00000449954 S100A7L2Q5SY68 101 aa3.68□□□□□ -1.82
LINC01961-201ENST00000449954 NDUFA6P56556 154 aa3.67□□□□□ -1.82
LINC01961-201ENST00000449954 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
LINC01961-201ENST00000449954 SPRR2DP22532 72 aa3.66□□□□□ -1.82
LINC01961-201ENST00000449954 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
LINC01961-201ENST00000449954 TEX49A0A1B0GTD5 131 aa3.65□□□□□ -1.83
LINC01961-201ENST00000449954 A0A1B0GV90 55 aa3.65□□□□□ -1.83
LINC01961-201ENST00000449954 ADIRFQ15847 76 aa3.65□□□□□ -1.83
LINC01961-201ENST00000449954 TAL2Q16559 108 aa3.65□□□□□ -1.83
LINC01961-201ENST00000449954 S100PP25815 95 aa3.64□□□□□ -1.83
LINC01961-201ENST00000449954 C12orf57Q99622 126 aa3.64□□□□□ -1.83
LINC01961-201ENST00000449954 NDUFC2O95298 119 aa3.63□□□□□ -1.83
LINC01961-201ENST00000449954 SCGB1A1P11684 91 aa3.63□□□□□ -1.83
LINC01961-201ENST00000449954 TMEM170BQ5T4T1 132 aa3.63□□□□□ -1.83
LINC01961-201ENST00000449954 COMMD7Q86VX2 200 aa3.63□□□□□ -1.83
LINC01961-201ENST00000449954 A0A1B0GV72 72 aa3.62□□□□□ -1.83
LINC01961-201ENST00000449954 Q5VV11 94 aa3.62□□□□□ -1.83
LINC01961-201ENST00000449954 NOTCH2NLQ7Z3S9 236 aa3.62□□□□□ -1.83
LINC01961-201ENST00000449954 DEFB105AQ8NG35 78 aa3.62□□□□□ -1.83
LINC01961-201ENST00000449954 MIEN1Q9BRT3 115 aa3.62□□□□□ -1.83
LINC01961-201ENST00000449954 KRTAP16-1A8MUX0 517 aa3.61□□□□□ -1.83
LINC01961-201ENST00000449954 MT1BP07438 61 aa3.61□□□□□ -1.83
LINC01961-201ENST00000449954 NAT8Q9UHE5 227 aa3.61□□□□□ -1.83
LINC01961-201ENST00000449954 V9GYY9 64 aa3.61□□□□□ -1.83
LINC01961-201ENST00000449954 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
LINC01961-201ENST00000449954 C11orf86A6NJI1 115 aa3.6□□□□□ -1.83
LINC01961-201ENST00000449954 SRP19P09132 144 aaKnown RBP3.6□□□□□ -1.83
LINC01961-201ENST00000449954 LINC01546A6NGU7 62 aa3.59□□□□□ -1.83
LINC01961-201ENST00000449954 SMIM6P0DI80 62 aa3.59□□□□□ -1.83
LINC01961-201ENST00000449954 IGLV5-48A0A075B6I7 105 aa3.58□□□□□ -1.84
LINC01961-201ENST00000449954 TRBV7-7A0A0K0K1E9 115 aa3.58□□□□□ -1.84
LINC01961-201ENST00000449954 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
LINC01961-201ENST00000449954 ELOF1P60002 83 aaKnown RBP3.58□□□□□ -1.84
LINC01961-201ENST00000449954 SNRPEP62304 92 aaKnown RBP3.58□□□□□ -1.84
LINC01961-201ENST00000449954 LITAFQ99732 161 aa3.58□□□□□ -1.84
LINC01961-201ENST00000449954 MYMXA0A1B0GTQ4 84 aa3.57□□□□□ -1.84
LINC01961-201ENST00000449954 TMEM223A0PJW6 202 aa3.57□□□□□ -1.84
LINC01961-201ENST00000449954 DLEU1O43261 78 aa3.57□□□□□ -1.84
LINC01961-201ENST00000449954 LST1O00453 97 aa3.56□□□□□ -1.84
LINC01961-201ENST00000449954 HSBP1O75506 76 aa3.56□□□□□ -1.84
LINC01961-201ENST00000449954 HBDP02042 147 aa3.56□□□□□ -1.84
LINC01961-201ENST00000449954 COX7BP24311 80 aa3.56□□□□□ -1.84
LINC01961-201ENST00000449954 UBE2V1Q13404 147 aa3.56□□□□□ -1.84
LINC01961-201ENST00000449954 ZNF815PA8K554 130 aa3.55□□□□□ -1.84
LINC01961-201ENST00000449954 F8WEM9 126 aa3.55□□□□□ -1.84
LINC01961-201ENST00000449954 IFITM2Q01629 132 aa3.55□□□□□ -1.84
LINC01961-201ENST00000449954 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
LINC01961-201ENST00000449954 C14orf144Q96I85 54 aa3.55□□□□□ -1.84
LINC01961-201ENST00000449954 TSTD3H0UI37 97 aa3.54□□□□□ -1.84
LINC01961-201ENST00000449954 KRTAP19-8Q3LI54 63 aa3.54□□□□□ -1.84
LINC01961-201ENST00000449954 Q6JHZ5 121 aa3.54□□□□□ -1.84
LINC01961-201ENST00000449954 FAM218AQ96MZ4 157 aa3.54□□□□□ -1.84
LINC01961-201ENST00000449954 SMCO4Q9NRQ5 59 aa3.54□□□□□ -1.84
LINC01961-201ENST00000449954 RHEBQ15382 184 aa3.53□□□□□ -1.84
LINC01961-201ENST00000449954 BAGE3Q86Y29 109 aa3.53□□□□□ -1.84
LINC01961-201ENST00000449954 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
LINC01961-201ENST00000449954 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
LINC01961-201ENST00000449954 SOSTDC1Q6X4U4 206 aa3.52□□□□□ -1.85
LINC01961-201ENST00000449954 A0A1W2PNM2 257 aa3.51□□□□□ -1.85
LINC01961-201ENST00000449954 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
LINC01961-201ENST00000449954 OR13C6PQ8NH95 151 aa3.51□□□□□ -1.85
LINC01961-201ENST00000449954 IMUPQ9GZP8 106 aa3.51□□□□□ -1.85
LINC01961-201ENST00000449954 SS18L2Q9UHA2 77 aa3.51□□□□□ -1.85
LINC01961-201ENST00000449954 TRBV7-6A0A0J9YX20 115 aa3.5□□□□□ -1.85
LINC01961-201ENST00000449954 NMUP48645 174 aa3.5□□□□□ -1.85
LINC01961-201ENST00000449954 DSCR10P59022 87 aa3.5□□□□□ -1.85
LINC01961-201ENST00000449954 A0A096LNJ9 63 aa3.49□□□□□ -1.85
LINC01961-201ENST00000449954 SMIM20Q8N5G0 67 aa3.49□□□□□ -1.85
LINC01961-201ENST00000449954 SPANXDQ9BXN6 97 aa3.49□□□□□ -1.85
LINC01961-201ENST00000449954 TRAV13-2A0A0B4J235 113 aa3.48□□□□□ -1.85
LINC01961-201ENST00000449954 A0A1B0GWB2 263 aa3.48□□□□□ -1.85
LINC01961-201ENST00000449954 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
LINC01961-201ENST00000449954 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
LINC01961-201ENST00000449954 SPANXCQ9NY87 97 aa3.48□□□□□ -1.85
LINC01961-201ENST00000449954 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
LINC01961-201ENST00000449954 NPC2P61916 151 aa3.47□□□□□ -1.85
LINC01961-201ENST00000449954 C4orf26Q17RF5 130 aa3.47□□□□□ -1.85
LINC01961-201ENST00000449954 NHP2Q9NX24 153 aaKnown RBP3.47□□□□□ -1.85
LINC01961-201ENST00000449954 TRAV12-1A0A0B4J245 112 aa3.46□□□□□ -1.86
LINC01961-201ENST00000449954 C9JQL5 133 aa3.46□□□□□ -1.86
LINC01961-201ENST00000449954 SPINK7P58062 85 aa3.46□□□□□ -1.86
LINC01961-201ENST00000449954 LINC00313P59037 77 aa3.46□□□□□ -1.86
LINC01961-201ENST00000449954 WFDC13Q8IUB5 93 aa3.46□□□□□ -1.86
LINC01961-201ENST00000449954 RPS10P5Q9NQ39 176 aa3.46□□□□□ -1.86
LINC01961-201ENST00000449954 PRO0628Q9UI54 55 aa3.46□□□□□ -1.86
LINC01961-201ENST00000449954 TSPEAR-AS2P59090 65 aa3.45□□□□□ -1.86
LINC01961-201ENST00000449954 VPS25Q9BRG1 176 aa3.45□□□□□ -1.86
LINC01961-201ENST00000449954 A0A0J9YXY3 114 aa3.44□□□□□ -1.86
LINC01961-201ENST00000449954 COLCA2A8K830 154 aa3.44□□□□□ -1.86
LINC01961-201ENST00000449954 LEPROTO15243 131 aa3.44□□□□□ -1.86
LINC01961-201ENST00000449954 MT-ND4LP03901 98 aa3.44□□□□□ -1.86
LINC01961-201ENST00000449954 PEA15Q15121 130 aa3.44□□□□□ -1.86
LINC01961-201ENST00000449954 SIGMAR1Q99720 223 aa3.44□□□□□ -1.86
LINC01961-201ENST00000449954 FAM236AA0A1B0GUQ0 79 aa3.43□□□□□ -1.86
LINC01961-201ENST00000449954 FAM236BA0A1B0GV22 79 aa3.43□□□□□ -1.86
LINC01961-201ENST00000449954 J3QQQ9 107 aa3.42□□□□□ -1.86
LINC01961-201ENST00000449954 PMCHL1Q16048 86 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms