RNA–Protein interactions for RNA: ENST00000447712.6

FGFR1-214, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR1, Length 5,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-214ENST00000447712 CFAP46Q8IYW2 2715 aa12.12□□□□□ -0.47
FGFR1-214ENST00000447712 CEP350Q5VT06 3117 aa12.09□□□□□ -0.47
FGFR1-214ENST00000447712 STAB1Q9NY15 2570 aa12.08□□□□□ -0.47
FGFR1-214ENST00000447712 M0QZ58 72 aa12.07□□□□□ -0.48
FGFR1-214ENST00000447712 LINC00472Q9H8W2 130 aa12.07□□□□□ -0.48
FGFR1-214ENST00000447712 SPRR1BP22528 89 aa12.05□□□□□ -0.48
FGFR1-214ENST00000447712 PLAC4Q8WY50 150 aa12.04□□□□□ -0.48
FGFR1-214ENST00000447712 Q75L30 129 aa12.03□□□□□ -0.48
FGFR1-214ENST00000447712 OXTP01178 125 aa12.02□□□□□ -0.48
FGFR1-214ENST00000447712 LINC01558Q9Y6Z2 57 aa11.99□□□□□ -0.49
FGFR1-214ENST00000447712 PANO1I0J062 215 aa11.95□□□□□ -0.5
FGFR1-214ENST00000447712 KRTAP26-1Q6PEX3 210 aa11.95□□□□□ -0.5
FGFR1-214ENST00000447712 C5orf42Q9H799 3197 aa11.94□□□□□ -0.5
FGFR1-214ENST00000447712 FP248Q71RG6 208 aaPredicted RBP11.94□□□□□ -0.5
FGFR1-214ENST00000447712 ADM2Q7Z4H4 148 aa11.92□□□□□ -0.5
FGFR1-214ENST00000447712 PRAC1Q96KF2 57 aa11.91□□□□□ -0.5
FGFR1-214ENST00000447712 SETXQ7Z333 2677 aaKnown RBP11.9□□□□□ -0.5
FGFR1-214ENST00000447712 FLG2Q5D862 2391 aaPredicted RBP11.88□□□□□ -0.51
FGFR1-214ENST00000447712 RPL37P61927 97 aaKnown RBP11.86□□□□□ -0.51
FGFR1-214ENST00000447712 TEP1Q99973 2627 aaKnown RBP11.86□□□□□ -0.51
FGFR1-214ENST00000447712 TEX15Q9BXT5 2789 aa11.85□□□□□ -0.51
FGFR1-214ENST00000447712 A0A087X002 238 aa11.85□□□□□ -0.51
FGFR1-214ENST00000447712 Q6ZR54 194 aa11.83□□□□□ -0.52
FGFR1-214ENST00000447712 CENPEQ02224 2701 aa11.81□□□□□ -0.52
FGFR1-214ENST00000447712 H1FX-AS1Q4G0G2 97 aa11.79□□□□□ -0.52
FGFR1-214ENST00000447712 ROMO1P60602 79 aa11.76□□□□□ -0.53
FGFR1-214ENST00000447712 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
FGFR1-214ENST00000447712 AKAP13Q12802 2813 aa11.76□□□□□ -0.53
FGFR1-214ENST00000447712 NBEAL1Q6ZS30 2694 aa11.75□□□□□ -0.53
FGFR1-214ENST00000447712 Q5VV11 94 aa11.75□□□□□ -0.53
FGFR1-214ENST00000447712 CHD6Q8TD26 2715 aa11.73□□□□□ -0.53
FGFR1-214ENST00000447712 CYSTM1Q9H1C7 97 aa11.72□□□□□ -0.53
FGFR1-214ENST00000447712 A0A0A0MQY5 61 aa11.72□□□□□ -0.53
FGFR1-214ENST00000447712 CHD7Q9P2D1 2997 aa11.66□□□□□ -0.54
FGFR1-214ENST00000447712 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
FGFR1-214ENST00000447712 PCNTO95613 3336 aa11.63□□□□□ -0.55
FGFR1-214ENST00000447712 KRTAP4-16G5E9R7 235 aaPredicted RBP11.6□□□□□ -0.55
FGFR1-214ENST00000447712 Q5XG85 94 aa11.6□□□□□ -0.55
FGFR1-214ENST00000447712 NOTCH2NLQ7Z3S9 236 aa11.58□□□□□ -0.56
FGFR1-214ENST00000447712 BAHCC1Q9P281 2608 aa11.57□□□□□ -0.56
FGFR1-214ENST00000447712 UNC79Q9P2D8 2635 aa11.57□□□□□ -0.56
FGFR1-214ENST00000447712 KRTAP11-1Q8IUC1 163 aa11.54□□□□□ -0.56
FGFR1-214ENST00000447712 MGAQ8IWI9 3026 aa11.52□□□□□ -0.57
FGFR1-214ENST00000447712 C20orf166-AS1Q96NR2 134 aa11.51□□□□□ -0.57
FGFR1-214ENST00000447712 A8MUU9 505 aa11.51□□□□□ -0.57
FGFR1-214ENST00000447712 DMBT1Q9UGM3 2413 aaPredicted RBP11.5□□□□□ -0.57
FGFR1-214ENST00000447712 Q6ZRN7 208 aaPredicted RBP11.48□□□□□ -0.57
FGFR1-214ENST00000447712 CFAP54Q96N23 3096 aa11.46□□□□□ -0.58
FGFR1-214ENST00000447712 KRTAP29-1A8MX34 341 aaPredicted RBP11.45□□□□□ -0.58
FGFR1-214ENST00000447712 RPS29P62273 56 aaKnown RBP11.42□□□□□ -0.58
FGFR1-214ENST00000447712 NOTCH1P46531 2555 aa11.42□□□□□ -0.58
FGFR1-214ENST00000447712 GCN1Q92616 2671 aaKnown RBP11.42□□□□□ -0.58
FGFR1-214ENST00000447712 A0A0C4DFX4 3053 aa11.4□□□□□ -0.58
FGFR1-214ENST00000447712 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.58
FGFR1-214ENST00000447712 KRTAP13-2Q52LG2 175 aa11.39□□□□□ -0.59
FGFR1-214ENST00000447712 CHD9Q3L8U1 2897 aa11.36□□□□□ -0.59
FGFR1-214ENST00000447712 A8MU10 97 aa11.35□□□□□ -0.59
FGFR1-214ENST00000447712 H3BS24 57 aa11.34□□□□□ -0.59
FGFR1-214ENST00000447712 RANBP2P49792 3224 aaKnown RBP11.34□□□□□ -0.59
FGFR1-214ENST00000447712 ASB16-AS1Q495Z4 193 aa11.33□□□□□ -0.6
FGFR1-214ENST00000447712 KRTAP7-1Q8IUC3 87 aa11.28□□□□□ -0.6
FGFR1-214ENST00000447712 NBEAL2Q6ZNJ1 2754 aa11.26□□□□□ -0.61
FGFR1-214ENST00000447712 ZNF292O60281 2723 aa11.25□□□□□ -0.61
FGFR1-214ENST00000447712 LAMA3Q16787 3333 aa11.25□□□□□ -0.61
FGFR1-214ENST00000447712 WDFY4Q6ZS81 3184 aa11.23□□□□□ -0.61
FGFR1-214ENST00000447712 FRYQ5TBA9 3013 aa11.23□□□□□ -0.61
FGFR1-214ENST00000447712 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.61
FGFR1-214ENST00000447712 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
FGFR1-214ENST00000447712 IGSF10Q6WRI0 2623 aa11.2□□□□□ -0.62
FGFR1-214ENST00000447712 DSPP15924 2871 aaKnown RBP11.18□□□□□ -0.62
FGFR1-214ENST00000447712 HTTP42858 3142 aa11.17□□□□□ -0.62
FGFR1-214ENST00000447712 UBR5O95071 2799 aaPredicted RBP11.16□□□□□ -0.62
FGFR1-214ENST00000447712 PRUNE2Q8WUY3 3088 aa11.13□□□□□ -0.63
FGFR1-214ENST00000447712 KRTAP13-1Q8IUC0 172 aa11.13□□□□□ -0.63
FGFR1-214ENST00000447712 ITPR2Q14571 2701 aa11.12□□□□□ -0.63
FGFR1-214ENST00000447712 A0A1B0GVY2 172 aa11.11□□□□□ -0.63
FGFR1-214ENST00000447712 TNP1P09430 55 aa11.11□□□□□ -0.63
FGFR1-214ENST00000447712 BRCA2P51587 3418 aa11.1□□□□□ -0.63
FGFR1-214ENST00000447712 MAP1AP78559 2803 aaPredicted RBP11.08□□□□□ -0.64
FGFR1-214ENST00000447712 NSD1Q96L73 2696 aaPredicted RBP11.04□□□□□ -0.64
FGFR1-214ENST00000447712 TRIOO75962 3097 aa11.04□□□□□ -0.64
FGFR1-214ENST00000447712 KRTAP25-1Q3LHN0 102 aa11□□□□□ -0.65
FGFR1-214ENST00000447712 KRTAP10-8P60410 259 aa11□□□□□ -0.65
FGFR1-214ENST00000447712 XIRP2A4UGR9 3374 aa10.99□□□□□ -0.65
FGFR1-214ENST00000447712 LAMA2P24043 3122 aaKnown RBP10.99□□□□□ -0.65
FGFR1-214ENST00000447712 TRANK1O15050 2925 aa10.98□□□□□ -0.65
FGFR1-214ENST00000447712 REV3LO60673 3130 aa10.96□□□□□ -0.65
FGFR1-214ENST00000447712 C10orf95Q9H7T3 257 aa10.96□□□□□ -0.66
FGFR1-214ENST00000447712 CRYBG3Q68DQ2 2970 aa10.89□□□□□ -0.67
FGFR1-214ENST00000447712 XP32Q5T750 250 aa10.89□□□□□ -0.67
FGFR1-214ENST00000447712 ITPR1Q14643 2758 aa10.88□□□□□ -0.67
FGFR1-214ENST00000447712 UNC80Q8N2C7 3258 aa10.84□□□□□ -0.67
FGFR1-214ENST00000447712 KRTAP16-1A8MUX0 517 aa10.83□□□□□ -0.68
FGFR1-214ENST00000447712 KRTAP10-10P60014 251 aa10.81□□□□□ -0.68
FGFR1-214ENST00000447712 CDH23Q9H251 3354 aa10.81□□□□□ -0.68
FGFR1-214ENST00000447712 FREM2Q5SZK8 3169 aa10.8□□□□□ -0.68
FGFR1-214ENST00000447712 TACC2O95359 2948 aa10.8□□□□□ -0.68
FGFR1-214ENST00000447712 KMT2BQ9UMN6 2715 aaPredicted RBP10.8□□□□□ -0.68
FGFR1-214ENST00000447712 A6NN06 94 aa10.78□□□□□ -0.68
FGFR1-214ENST00000447712 NDUFAF8A1L188 74 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms