RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TENM4Q6N022 2769 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 H3BNG1 76 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 Q8NDZ9 215 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 SPINT4Q6UDR6 99 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 OXLD1Q5BKU9 147 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 PHF5AQ7RTV0 110 aaKnown RBP5.08□□□□□ -1.6
SMG1-202ENST00000446231 PRR26Q8N8Z3 221 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 FAM229AH3BQW9 127 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 SPINK7P58062 85 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 C19orf73Q9NVV2 129 aa5.07□□□□□ -1.6
SMG1-202ENST00000446231 MRPL34Q9BQ48 92 aaKnown RBP5.07□□□□□ -1.6
SMG1-202ENST00000446231 INAFM1C9JVW0 142 aa5.07□□□□□ -1.6
SMG1-202ENST00000446231 LINC00313P59037 77 aa5.06□□□□□ -1.6
SMG1-202ENST00000446231 SRRM2Q9UQ35 2752 aaKnown RBP5.06□□□□□ -1.6
SMG1-202ENST00000446231 ZCCHC13Q8WW36 166 aaKnown RBP5.06□□□□□ -1.6
SMG1-202ENST00000446231 COL12A1Q99715 3063 aa5.05□□□□□ -1.6
SMG1-202ENST00000446231 CHTF8P0CG12 524 aa5.04□□□□□ -1.6
SMG1-202ENST00000446231 CNBPP62633 177 aaKnown RBP5.03□□□□□ -1.6
SMG1-202ENST00000446231 ATMQ13315 3056 aa5.03□□□□□ -1.6
SMG1-202ENST00000446231 IGLV5-52A0A0A0MRZ9 124 aa5.03□□□□□ -1.6
SMG1-202ENST00000446231 TLX1NBP0CAT3 122 aa5.02□□□□□ -1.61
SMG1-202ENST00000446231 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
SMG1-202ENST00000446231 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
SMG1-202ENST00000446231 MKI67P46013 3256 aaKnown RBP5.01□□□□□ -1.61
SMG1-202ENST00000446231 SMR3AQ99954 134 aa5□□□□□ -1.61
SMG1-202ENST00000446231 C1orf134Q5TEV5 83 aa5□□□□□ -1.61
SMG1-202ENST00000446231 MXRA5Q9NR99 2828 aa5□□□□□ -1.61
SMG1-202ENST00000446231 HRES1P13985 223 aa5□□□□□ -1.61
SMG1-202ENST00000446231 A6NN06 94 aa4.99□□□□□ -1.61
SMG1-202ENST00000446231 CRIPTQ9P021 101 aa4.99□□□□□ -1.61
SMG1-202ENST00000446231 BOD1L1Q8NFC6 3051 aa4.98□□□□□ -1.61
SMG1-202ENST00000446231 CASC10Q5T4H9 136 aa4.98□□□□□ -1.61
SMG1-202ENST00000446231 ASB16-AS1Q495Z4 193 aa4.96□□□□□ -1.61
SMG1-202ENST00000446231 C9orf163Q8N9P6 203 aa4.96□□□□□ -1.62
SMG1-202ENST00000446231 HTTP42858 3142 aa4.96□□□□□ -1.62
SMG1-202ENST00000446231 ANAPC11Q9NYG5 84 aa4.96□□□□□ -1.62
SMG1-202ENST00000446231 ADGRG4Q8IZF6 3080 aa4.96□□□□□ -1.62
SMG1-202ENST00000446231 LINC00472Q9H8W2 130 aa4.94□□□□□ -1.62
SMG1-202ENST00000446231 TGP01266 2768 aa4.94□□□□□ -1.62
SMG1-202ENST00000446231 PKD1L1Q8TDX9 2849 aa4.94□□□□□ -1.62
SMG1-202ENST00000446231 LCE6AA0A183 80 aa4.94□□□□□ -1.62
SMG1-202ENST00000446231 SPACA4Q8TDM5 124 aa4.93□□□□□ -1.62
SMG1-202ENST00000446231 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
SMG1-202ENST00000446231 VWFP04275 2813 aa4.93□□□□□ -1.62
SMG1-202ENST00000446231 SPRR1AP35321 89 aa4.93□□□□□ -1.62
SMG1-202ENST00000446231 NUPR2A6NF83 97 aa4.92□□□□□ -1.62
SMG1-202ENST00000446231 Q96NJ1 140 aa4.92□□□□□ -1.62
SMG1-202ENST00000446231 A8MU10 97 aa4.91□□□□□ -1.62
SMG1-202ENST00000446231 A0A1B0GU33 70 aa4.91□□□□□ -1.62
SMG1-202ENST00000446231 Q8N1X5 172 aa4.91□□□□□ -1.62
SMG1-202ENST00000446231 LAMA1P25391 3075 aa4.91□□□□□ -1.62
SMG1-202ENST00000446231 ZNF861PO60384 105 aa4.9□□□□□ -1.63
SMG1-202ENST00000446231 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
SMG1-202ENST00000446231 NBDYA0A0U1RRE5 68 aa4.89□□□□□ -1.63
SMG1-202ENST00000446231 DMXL1Q9Y485 3027 aa4.88□□□□□ -1.63
SMG1-202ENST00000446231 TNRC18O15417 2968 aaPredicted RBP4.88□□□□□ -1.63
SMG1-202ENST00000446231 TNP2Q05952 138 aa4.87□□□□□ -1.63
SMG1-202ENST00000446231 APLNQ9ULZ1 77 aa4.87□□□□□ -1.63
SMG1-202ENST00000446231 KRTAP10-11P60412 298 aa4.87□□□□□ -1.63
SMG1-202ENST00000446231 A0A0D9SG42 100 aa4.86□□□□□ -1.63
SMG1-202ENST00000446231 REV3LO60673 3130 aa4.86□□□□□ -1.63
SMG1-202ENST00000446231 LY6G6CO95867 125 aa4.86□□□□□ -1.63
SMG1-202ENST00000446231 Q6ZR54 194 aa4.86□□□□□ -1.63
SMG1-202ENST00000446231 RTL8CO15255 209 aa4.86□□□□□ -1.63
SMG1-202ENST00000446231 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
SMG1-202ENST00000446231 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
SMG1-202ENST00000446231 IGLV7-43P04211 117 aa4.84□□□□□ -1.63
SMG1-202ENST00000446231 UTRNP46939 3433 aa4.84□□□□□ -1.64
SMG1-202ENST00000446231 TENM2Q9NT68 2774 aa4.83□□□□□ -1.64
SMG1-202ENST00000446231 SPRR1BP22528 89 aa4.83□□□□□ -1.64
SMG1-202ENST00000446231 Q5W150 140 aa4.83□□□□□ -1.64
SMG1-202ENST00000446231 PLA2G1BP04054 148 aaKnown RBP4.83□□□□□ -1.64
SMG1-202ENST00000446231 AKAP9Q99996 3911 aa4.83□□□□□ -1.64
SMG1-202ENST00000446231 CFAP47Q6ZTR5 3102 aa4.82□□□□□ -1.64
SMG1-202ENST00000446231 KRTAP10-3P60369 221 aa4.82□□□□□ -1.64
SMG1-202ENST00000446231 KRTAP26-1Q6PEX3 210 aa4.82□□□□□ -1.64
SMG1-202ENST00000446231 ADM2Q7Z4H4 148 aa4.82□□□□□ -1.64
SMG1-202ENST00000446231 K7EIL1 84 aa4.81□□□□□ -1.64
SMG1-202ENST00000446231 TYMSOSQ8TAI1 123 aa4.8□□□□□ -1.64
SMG1-202ENST00000446231 PSORS1C2Q9UIG4 136 aa4.79□□□□□ -1.64
SMG1-202ENST00000446231 KRTAP4-16G5E9R7 235 aaPredicted RBP4.79□□□□□ -1.64
SMG1-202ENST00000446231 HRNRQ86YZ3 2850 aaPredicted RBP4.78□□□□□ -1.64
SMG1-202ENST00000446231 A0A087X002 238 aa4.78□□□□□ -1.64
SMG1-202ENST00000446231 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
SMG1-202ENST00000446231 LINC00304Q8N9R0 145 aa4.74□□□□□ -1.65
SMG1-202ENST00000446231 KRTAP16-1A8MUX0 517 aa4.74□□□□□ -1.65
SMG1-202ENST00000446231 KRTAP1-3Q8IUG1 177 aa4.74□□□□□ -1.65
SMG1-202ENST00000446231 ROMO1P60602 79 aa4.74□□□□□ -1.65
SMG1-202ENST00000446231 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.73□□□□□ -1.65
SMG1-202ENST00000446231 A0A087WTM6 91 aa4.73□□□□□ -1.65
SMG1-202ENST00000446231 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
SMG1-202ENST00000446231 ZFHX3Q15911 3703 aa4.71□□□□□ -1.66
SMG1-202ENST00000446231 C9orf92A6NGG3 77 aa4.71□□□□□ -1.66
SMG1-202ENST00000446231 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
SMG1-202ENST00000446231 NOTCH2NLQ7Z3S9 236 aa4.7□□□□□ -1.66
SMG1-202ENST00000446231 LINC00483Q53H64 154 aa4.69□□□□□ -1.66
SMG1-202ENST00000446231 NBPF19A0A087WUL8 3843 aa4.69□□□□□ -1.66
SMG1-202ENST00000446231 KRTAP1-1Q07627 177 aa4.68□□□□□ -1.66
SMG1-202ENST00000446231 LAMA3Q16787 3333 aa4.68□□□□□ -1.66
SMG1-202ENST00000446231 SPTBN5Q9NRC6 3674 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms