RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 UBE2D2P62837 147 aa3.8□□□□□ -1.8
MCF2-206ENST00000446225 KRTAP1-5Q9BYS1 174 aa3.8□□□□□ -1.8
MCF2-206ENST00000446225 DNAH17Q9UFH2 4485 aa3.8□□□□□ -1.8
MCF2-206ENST00000446225 GAS8-AS1O95177 125 aa3.8□□□□□ -1.8
MCF2-206ENST00000446225 LELP1Q5T871 98 aa3.8□□□□□ -1.8
MCF2-206ENST00000446225 TRAV7A0A075B6U4 112 aa3.79□□□□□ -1.8
MCF2-206ENST00000446225 TRBV10-2A0A0K0K1G8 114 aa3.79□□□□□ -1.8
MCF2-206ENST00000446225 C1orf134Q5TEV5 83 aa3.79□□□□□ -1.8
MCF2-206ENST00000446225 DEFB104AQ8WTQ1 72 aa3.79□□□□□ -1.8
MCF2-206ENST00000446225 RPL39LQ96EH5 51 aaKnown RBP3.79□□□□□ -1.8
MCF2-206ENST00000446225 RTL8CO15255 209 aa3.78□□□□□ -1.8
MCF2-206ENST00000446225 DNAH10OSP0CZ25 163 aa3.78□□□□□ -1.8
MCF2-206ENST00000446225 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
MCF2-206ENST00000446225 HIGD1BQ9P298 99 aa3.78□□□□□ -1.8
MCF2-206ENST00000446225 IGHV3-30P01768 117 aa3.78□□□□□ -1.81
MCF2-206ENST00000446225 IGHV3-33P01772 117 aa3.78□□□□□ -1.81
MCF2-206ENST00000446225 SMIM13P0DJ93 91 aa3.78□□□□□ -1.81
MCF2-206ENST00000446225 IGHV3-30-5P0DP03 117 aa3.78□□□□□ -1.81
MCF2-206ENST00000446225 Q6ZQT0 140 aa3.78□□□□□ -1.81
MCF2-206ENST00000446225 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
MCF2-206ENST00000446225 TRBV6-8A0A0A6YYG3 113 aa3.77□□□□□ -1.81
MCF2-206ENST00000446225 H3BPC8 53 aa3.77□□□□□ -1.81
MCF2-206ENST00000446225 CRPP02741 224 aa3.77□□□□□ -1.81
MCF2-206ENST00000446225 LINC01556Q5JQF7 62 aa3.77□□□□□ -1.81
MCF2-206ENST00000446225 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
MCF2-206ENST00000446225 H7C2G1 150 aa3.76□□□□□ -1.81
MCF2-206ENST00000446225 ACYP1P07311 99 aa3.76□□□□□ -1.81
MCF2-206ENST00000446225 ZNF22P17026 224 aaPredicted RBP3.76□□□□□ -1.81
MCF2-206ENST00000446225 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
MCF2-206ENST00000446225 TRBV6-5A0A0K0K1A5 114 aa3.76□□□□□ -1.81
MCF2-206ENST00000446225 SDHAF1A6NFY7 115 aa3.76□□□□□ -1.81
MCF2-206ENST00000446225 TRAV13-2A0A0B4J235 113 aa3.75□□□□□ -1.81
MCF2-206ENST00000446225 POLR2KP53803 58 aaKnown RBP3.75□□□□□ -1.81
MCF2-206ENST00000446225 TRBV25-1A0A075B6N4 114 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 D6R8Y8 96 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 I3L3M4 83 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 C9orf116Q5BN46 136 aaPredicted RBP3.74□□□□□ -1.81
MCF2-206ENST00000446225 Q6ZRN7 208 aaPredicted RBP3.74□□□□□ -1.81
MCF2-206ENST00000446225 C14orf132Q9NPU4 83 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 KLK12Q9UKR0 248 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 DNAH11Q96DT5 4516 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 H7BZZ5 65 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 BCE1O60756 84 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 PPP1R17O96001 155 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 CYP4F30PQ9H0H9 118 aa3.74□□□□□ -1.81
MCF2-206ENST00000446225 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.73□□□□□ -1.81
MCF2-206ENST00000446225 A0A1B0GVY2 172 aa3.73□□□□□ -1.81
MCF2-206ENST00000446225 IGKV2-29A2NJV5 120 aaPredicted RBP3.73□□□□□ -1.81
MCF2-206ENST00000446225 ENHOQ6UWT2 76 aa3.73□□□□□ -1.81
MCF2-206ENST00000446225 CASC2Q6XLA1 102 aa3.73□□□□□ -1.81
MCF2-206ENST00000446225 LINC00643Q86TS7 51 aa3.73□□□□□ -1.81
MCF2-206ENST00000446225 PKD1P98161 4303 aa3.73□□□□□ -1.81
MCF2-206ENST00000446225 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
MCF2-206ENST00000446225 IGLV4-60A0A075B6I1 120 aa3.72□□□□□ -1.81
MCF2-206ENST00000446225 ANGP03950 147 aaKnown RBP3.72□□□□□ -1.81
MCF2-206ENST00000446225 HECTD4Q9Y4D8 3996 aa3.72□□□□□ -1.81
MCF2-206ENST00000446225 FCER1GP30273 86 aa3.72□□□□□ -1.81
MCF2-206ENST00000446225 TMEM170BQ5T4T1 132 aa3.72□□□□□ -1.81
MCF2-206ENST00000446225 SMIM2Q9BVW6 85 aa3.72□□□□□ -1.81
MCF2-206ENST00000446225 TRBV10-3A0A0K0K1G6 114 aa3.71□□□□□ -1.82
MCF2-206ENST00000446225 HCG22E2RYF7 251 aa3.71□□□□□ -1.82
MCF2-206ENST00000446225 KLKP1Q107X0 134 aa3.71□□□□□ -1.82
MCF2-206ENST00000446225 CLPSL2Q6UWE3 100 aa3.71□□□□□ -1.82
MCF2-206ENST00000446225 SPTSSBQ8NFR3 76 aa3.71□□□□□ -1.82
MCF2-206ENST00000446225 PRR34Q9NV39 138 aa3.71□□□□□ -1.82
MCF2-206ENST00000446225 IGKV2D-24A0A075B6R9 120 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 A0A087WTM6 91 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 LRCOL1A6NCL2 159 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 C11orf86A6NJI1 115 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 PSCAO43653 123 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 DYNC1H1Q14204 4646 aaKnown RBP3.7□□□□□ -1.82
MCF2-206ENST00000446225 A0A087WSZ3 146 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 IGKV3OR2-268A0A0C4DH90 116 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 A0A1B0GU33 70 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 TIMM21Q9BVV7 248 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 CDC42SE1Q9NRR8 79 aa3.7□□□□□ -1.82
MCF2-206ENST00000446225 IGLV10-54A0A075B6I4 117 aa3.69□□□□□ -1.82
MCF2-206ENST00000446225 IFI27P40305 119 aaPredicted RBP3.69□□□□□ -1.82
MCF2-206ENST00000446225 RPL39P62891 51 aaKnown RBP3.69□□□□□ -1.82
MCF2-206ENST00000446225 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
MCF2-206ENST00000446225 KRTAP26-1Q6PEX3 210 aa3.69□□□□□ -1.82
MCF2-206ENST00000446225 SPINT4Q6UDR6 99 aa3.69□□□□□ -1.82
MCF2-206ENST00000446225 Q8N9L7 120 aa3.69□□□□□ -1.82
MCF2-206ENST00000446225 C20orf166-AS1Q96NR2 134 aa3.69□□□□□ -1.82
MCF2-206ENST00000446225 CDC42SE2Q9NRR3 84 aa3.69□□□□□ -1.82
MCF2-206ENST00000446225 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
MCF2-206ENST00000446225 DNAH5Q8TE73 4624 aa3.68□□□□□ -1.82
MCF2-206ENST00000446225 PKHD1P08F94 4074 aa3.67□□□□□ -1.82
MCF2-206ENST00000446225 BAALC-AS2P0C853 105 aa3.67□□□□□ -1.82
MCF2-206ENST00000446225 LINC00959A0A1B0GUT2 108 aa3.66□□□□□ -1.82
MCF2-206ENST00000446225 COX8AP10176 69 aa3.66□□□□□ -1.82
MCF2-206ENST00000446225 PRO1854Q9UHT4 67 aa3.66□□□□□ -1.82
MCF2-206ENST00000446225 LRP1BQ9NZR2 4599 aa3.66□□□□□ -1.82
MCF2-206ENST00000446225 LINC01546A6NGU7 62 aa3.66□□□□□ -1.82
MCF2-206ENST00000446225 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
MCF2-206ENST00000446225 IGIPA6NJ69 53 aa3.65□□□□□ -1.83
MCF2-206ENST00000446225 K7EMI3 77 aa3.65□□□□□ -1.83
MCF2-206ENST00000446225 KRTAP10-1P60331 282 aa3.64□□□□□ -1.83
MCF2-206ENST00000446225 TMEM254Q8TBM7 123 aa3.64□□□□□ -1.83
MCF2-206ENST00000446225 KIAA1109Q2LD37 5005 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms