RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 LINC00313P59037 77 aa10.54□□□□□ -0.72
TCOF1-206ENST00000445265 IGKV2D-30A0A075B6S6 120 aa10.54□□□□□ -0.72
TCOF1-206ENST00000445265 A0A1B0GVX0 72 aa10.54□□□□□ -0.72
TCOF1-206ENST00000445265 ZNF861PO60384 105 aa10.54□□□□□ -0.72
TCOF1-206ENST00000445265 IGKV2-30P06310 120 aa10.54□□□□□ -0.72
TCOF1-206ENST00000445265 CYP4F30PQ9H0H9 118 aa10.53□□□□□ -0.72
TCOF1-206ENST00000445265 SPANXA2-OT1Q8N9U9 137 aa10.53□□□□□ -0.72
TCOF1-206ENST00000445265 UBR5O95071 2799 aaPredicted RBP10.52□□□□□ -0.72
TCOF1-206ENST00000445265 A0A087WTM6 91 aa10.52□□□□□ -0.73
TCOF1-206ENST00000445265 SPACA4Q8TDM5 124 aa10.52□□□□□ -0.73
TCOF1-206ENST00000445265 UTP20O75691 2785 aaKnown RBP10.5□□□□□ -0.73
TCOF1-206ENST00000445265 TEP1Q99973 2627 aaKnown RBP10.5□□□□□ -0.73
TCOF1-206ENST00000445265 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
TCOF1-206ENST00000445265 A0A1B0GU69 56 aa10.49□□□□□ -0.73
TCOF1-206ENST00000445265 NOTCH1P46531 2555 aa10.48□□□□□ -0.73
TCOF1-206ENST00000445265 SSBP3-AS1Q7Z2R9 100 aa10.48□□□□□ -0.73
TCOF1-206ENST00000445265 SPINK1P00995 79 aa10.47□□□□□ -0.73
TCOF1-206ENST00000445265 Q5XG85 94 aa10.46□□□□□ -0.74
TCOF1-206ENST00000445265 ZANQ9Y493 2812 aa10.45□□□□□ -0.74
TCOF1-206ENST00000445265 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
TCOF1-206ENST00000445265 C7orf65Q6ZTY9 151 aa10.44□□□□□ -0.74
TCOF1-206ENST00000445265 COL6A5A8TX70 2615 aa10.41□□□□□ -0.74
TCOF1-206ENST00000445265 IGLV8-61A0A075B6I0 122 aa10.4□□□□□ -0.74
TCOF1-206ENST00000445265 Q1T7F1 81 aa10.39□□□□□ -0.75
TCOF1-206ENST00000445265 TYMSOSQ8TAI1 123 aa10.39□□□□□ -0.75
TCOF1-206ENST00000445265 ANAPC11Q9NYG5 84 aa10.39□□□□□ -0.75
TCOF1-206ENST00000445265 TNP2Q05952 138 aa10.38□□□□□ -0.75
TCOF1-206ENST00000445265 IGLV7-43P04211 117 aa10.37□□□□□ -0.75
TCOF1-206ENST00000445265 FP248Q71RG6 208 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-206ENST00000445265 SPRR1BP22528 89 aa10.37□□□□□ -0.75
TCOF1-206ENST00000445265 OXTP01178 125 aa10.36□□□□□ -0.75
TCOF1-206ENST00000445265 STAB1Q9NY15 2570 aa10.35□□□□□ -0.75
TCOF1-206ENST00000445265 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-206ENST00000445265 APCP25054 2843 aa10.32□□□□□ -0.76
TCOF1-206ENST00000445265 ITPR2Q14571 2701 aa10.32□□□□□ -0.76
TCOF1-206ENST00000445265 WWC2-AS2Q96NR7 200 aa10.31□□□□□ -0.76
TCOF1-206ENST00000445265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-206ENST00000445265 PLA2G1BP04054 148 aaKnown RBP10.3□□□□□ -0.76
TCOF1-206ENST00000445265 ATP11AUNQ6ZP68 121 aa10.3□□□□□ -0.76
TCOF1-206ENST00000445265 Q96NJ1 140 aa10.3□□□□□ -0.76
TCOF1-206ENST00000445265 FAM229BQ4G0N7 80 aa10.3□□□□□ -0.76
TCOF1-206ENST00000445265 MMP24-AS1A0A0U1RRL7 71 aa10.29□□□□□ -0.76
TCOF1-206ENST00000445265 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
TCOF1-206ENST00000445265 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
TCOF1-206ENST00000445265 IGLV7-46A0A075B6I9 117 aa10.28□□□□□ -0.76
TCOF1-206ENST00000445265 ASH1LQ9NR48 2969 aaKnown RBP10.27□□□□□ -0.76
TCOF1-206ENST00000445265 CD164Q04900 197 aa10.24□□□□□ -0.77
TCOF1-206ENST00000445265 UQCR11O14957 56 aa10.22□□□□□ -0.77
TCOF1-206ENST00000445265 WDFY3Q8IZQ1 3526 aa10.22□□□□□ -0.77
TCOF1-206ENST00000445265 NBEAL1Q6ZS30 2694 aa10.21□□□□□ -0.77
TCOF1-206ENST00000445265 MUC3AQ02505 3323 aa10.2□□□□□ -0.78
TCOF1-206ENST00000445265 NIPBLQ6KC79 2804 aaeCLIP10.18□□□□□ -0.783e-7■■■■■ 27.8
TCOF1-206ENST00000445265 PLAC8Q9NZF1 115 aa10.18□□□□□ -0.78
TCOF1-206ENST00000445265 CDC42SE1Q9NRR8 79 aa10.17□□□□□ -0.78
TCOF1-206ENST00000445265 Q8N9P0 234 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-206ENST00000445265 NF1P21359 2839 aa10.17□□□□□ -0.78
TCOF1-206ENST00000445265 NSD1Q96L73 2696 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-206ENST00000445265 LINC00304Q8N9R0 145 aa10.15□□□□□ -0.78
TCOF1-206ENST00000445265 FBN2P35556 2912 aa10.15□□□□□ -0.78
TCOF1-206ENST00000445265 KTN1-AS1Q86SY8 53 aa10.13□□□□□ -0.79
TCOF1-206ENST00000445265 PRR26Q8N8Z3 221 aa10.13□□□□□ -0.79
TCOF1-206ENST00000445265 DCHS2Q6V1P9 2916 aa10.13□□□□□ -0.79
TCOF1-206ENST00000445265 CELSR2Q9HCU4 2923 aa10.13□□□□□ -0.79
TCOF1-206ENST00000445265 Q75L30 129 aa10.12□□□□□ -0.79
TCOF1-206ENST00000445265 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
TCOF1-206ENST00000445265 MIR22HGQ0VDD5 57 aa10.11□□□□□ -0.79
TCOF1-206ENST00000445265 KMT2BQ9UMN6 2715 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-206ENST00000445265 KRTAP29-1A8MX34 341 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-206ENST00000445265 MXRA5Q9NR99 2828 aa10.1□□□□□ -0.79
TCOF1-206ENST00000445265 HIVEP1P15822 2718 aa10.1□□□□□ -0.79
TCOF1-206ENST00000445265 BAHCC1Q9P281 2608 aa10.09□□□□□ -0.79
TCOF1-206ENST00000445265 CRYBG3Q68DQ2 2970 aa10.09□□□□□ -0.79
TCOF1-206ENST00000445265 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
TCOF1-206ENST00000445265 KRTAP7-1Q8IUC3 87 aa10.07□□□□□ -0.8
TCOF1-206ENST00000445265 HRES1P13985 223 aa10.05□□□□□ -0.8
TCOF1-206ENST00000445265 Q5VV11 94 aa10.04□□□□□ -0.8
TCOF1-206ENST00000445265 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
TCOF1-206ENST00000445265 RELNP78509 3460 aa10.04□□□□□ -0.8
TCOF1-206ENST00000445265 LCE6AA0A183 80 aa10.03□□□□□ -0.8
TCOF1-206ENST00000445265 DCHS1Q96JQ0 3298 aa10.01□□□□□ -0.81
TCOF1-206ENST00000445265 DMDP11532 3685 aa10.01□□□□□ -0.81
TCOF1-206ENST00000445265 PANO1I0J062 215 aa10□□□□□ -0.81
TCOF1-206ENST00000445265 ZFHX4Q86UP3 3567 aa10□□□□□ -0.81
TCOF1-206ENST00000445265 ASPMQ8IZT6 3477 aa9.97□□□□□ -0.81
TCOF1-206ENST00000445265 C9orf92A6NGG3 77 aa9.96□□□□□ -0.81
TCOF1-206ENST00000445265 LAMA5O15230 3695 aa9.96□□□□□ -0.81
TCOF1-206ENST00000445265 Q6ZR54 194 aa9.96□□□□□ -0.81
TCOF1-206ENST00000445265 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-206ENST00000445265 LCA10Q71F78 164 aa9.94□□□□□ -0.82
TCOF1-206ENST00000445265 KRTAP11-1Q8IUC1 163 aa9.94□□□□□ -0.82
TCOF1-206ENST00000445265 Q8N1X5 172 aa9.94□□□□□ -0.82
TCOF1-206ENST00000445265 STAB2Q8WWQ8 2551 aa9.93□□□□□ -0.82
TCOF1-206ENST00000445265 Q5W150 140 aa9.93□□□□□ -0.82
TCOF1-206ENST00000445265 Q6ZRN7 208 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-206ENST00000445265 KRTAP13-1Q8IUC0 172 aa9.83□□□□□ -0.84
TCOF1-206ENST00000445265 SPINK7P58062 85 aa9.82□□□□□ -0.84
TCOF1-206ENST00000445265 SMG1Q96Q15 3661 aaKnown RBP9.82□□□□□ -0.84
TCOF1-206ENST00000445265 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
TCOF1-206ENST00000445265 KRTAP10-2P60368 255 aa9.76□□□□□ -0.85
TCOF1-206ENST00000445265 A0A087X002 238 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms