RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 FAM229BQ4G0N7 80 aa10.19□□□□□ -0.78
LIME1-202ENST00000444951 LYRM7Q5U5X0 104 aa10.19□□□□□ -0.78
LIME1-202ENST00000444951 A0A1W2PPM0 123 aa10.18□□□□□ -0.78
LIME1-202ENST00000444951 LST1O00453 97 aa10.18□□□□□ -0.78
LIME1-202ENST00000444951 C3orf22Q8N5N4 141 aa10.18□□□□□ -0.78
LIME1-202ENST00000444951 IGLV5-48A0A075B6I7 105 aa10.17□□□□□ -0.78
LIME1-202ENST00000444951 Q8N377 158 aa10.17□□□□□ -0.78
LIME1-202ENST00000444951 FABP2P12104 132 aa10.16□□□□□ -0.78
LIME1-202ENST00000444951 SPRR1BP22528 89 aa10.16□□□□□ -0.78
LIME1-202ENST00000444951 KRTAP10-8P60410 259 aa10.16□□□□□ -0.78
LIME1-202ENST00000444951 ATXN8Q156A1 80 aa10.16□□□□□ -0.78
LIME1-202ENST00000444951 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
LIME1-202ENST00000444951 C9orf153Q5TBE3 101 aa10.15□□□□□ -0.78
LIME1-202ENST00000444951 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
LIME1-202ENST00000444951 LAMTOR3Q9UHA4 124 aa10.15□□□□□ -0.78
LIME1-202ENST00000444951 TRACP01848 142 aa10.14□□□□□ -0.79
LIME1-202ENST00000444951 MOBPQ13875 183 aa10.13□□□□□ -0.79
LIME1-202ENST00000444951 OCIAD2Q56VL3 154 aa10.13□□□□□ -0.79
LIME1-202ENST00000444951 ORMDL1Q9P0S3 153 aa10.13□□□□□ -0.79
LIME1-202ENST00000444951 LPAP08519 4548 aa10.12□□□□□ -0.79
LIME1-202ENST00000444951 TRBV20-1A0A075B6N2 111 aa10.12□□□□□ -0.79
LIME1-202ENST00000444951 SMIM29Q86T20 159 aa10.12□□□□□ -0.79
LIME1-202ENST00000444951 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
LIME1-202ENST00000444951 F8WEM9 126 aa10.09□□□□□ -0.79
LIME1-202ENST00000444951 GHRHP01286 108 aa10.08□□□□□ -0.8
LIME1-202ENST00000444951 PPDPFLQ8WWR9 84 aa10.08□□□□□ -0.8
LIME1-202ENST00000444951 H3BMG7 143 aa10.07□□□□□ -0.8
LIME1-202ENST00000444951 BAALC-AS2P0C853 105 aa10.07□□□□□ -0.8
LIME1-202ENST00000444951 Q8NBF4 154 aa10.07□□□□□ -0.8
LIME1-202ENST00000444951 A0A1B0GV72 72 aa10.06□□□□□ -0.8
LIME1-202ENST00000444951 C9JAW5 83 aa10.06□□□□□ -0.8
LIME1-202ENST00000444951 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
LIME1-202ENST00000444951 MTURNQ8N3F0 131 aa10.05□□□□□ -0.8
LIME1-202ENST00000444951 TMEM256-PLSCR3K7ERE1 68 aa10.04□□□□□ -0.8
LIME1-202ENST00000444951 A0A0G2JQZ4 141 aa10.03□□□□□ -0.8
LIME1-202ENST00000444951 H3BQ85 93 aa10.03□□□□□ -0.8
LIME1-202ENST00000444951 SSBP3-AS1Q7Z2R9 100 aa10.03□□□□□ -0.8
LIME1-202ENST00000444951 K7EP34 96 aa10.02□□□□□ -0.81
LIME1-202ENST00000444951 LINC00304Q8N9R0 145 aa10.02□□□□□ -0.81
LIME1-202ENST00000444951 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
LIME1-202ENST00000444951 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
LIME1-202ENST00000444951 ANKRD29Q8N6D5 301 aa9.99□□□□□ -0.81
LIME1-202ENST00000444951 UBE2V1Q13404 147 aa9.98□□□□□ -0.81
LIME1-202ENST00000444951 GTF2H5Q6ZYL4 71 aa9.97□□□□□ -0.81
LIME1-202ENST00000444951 IGLV8-61A0A075B6I0 122 aa9.95□□□□□ -0.82
LIME1-202ENST00000444951 Q6JHZ5 121 aa9.95□□□□□ -0.82
LIME1-202ENST00000444951 IGFL1Q6UW32 110 aa9.95□□□□□ -0.82
LIME1-202ENST00000444951 H3BT86 120 aa9.93□□□□□ -0.82
LIME1-202ENST00000444951 SPAG11AQ6PDA7 123 aa9.93□□□□□ -0.82
LIME1-202ENST00000444951 A0A1B0GV90 55 aa9.92□□□□□ -0.82
LIME1-202ENST00000444951 RBM3P98179 157 aaKnown RBP9.91□□□□□ -0.82
LIME1-202ENST00000444951 SPINK1P00995 79 aa9.89□□□□□ -0.83
LIME1-202ENST00000444951 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
LIME1-202ENST00000444951 DSCR8Q96T75 97 aa9.88□□□□□ -0.83
LIME1-202ENST00000444951 PRO0461Q9UI25 63 aa9.88□□□□□ -0.83
LIME1-202ENST00000444951 JMJD7-PLA2G4BH0Y9G9 81 aa9.86□□□□□ -0.83
LIME1-202ENST00000444951 CD164Q04900 197 aa9.86□□□□□ -0.83
LIME1-202ENST00000444951 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
LIME1-202ENST00000444951 C14orf132Q9NPU4 83 aa9.85□□□□□ -0.83
LIME1-202ENST00000444951 MUC2Q02817 5179 aa9.85□□□□□ -0.83
LIME1-202ENST00000444951 RETNLBQ9BQ08 111 aa9.84□□□□□ -0.83
LIME1-202ENST00000444951 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
LIME1-202ENST00000444951 A0A1W2PNM2 257 aa9.83□□□□□ -0.84
LIME1-202ENST00000444951 CCKP06307 115 aa9.83□□□□□ -0.84
LIME1-202ENST00000444951 TRBV7-7A0A0K0K1E9 115 aa9.82□□□□□ -0.84
LIME1-202ENST00000444951 F8W1H4 67 aa9.82□□□□□ -0.84
LIME1-202ENST00000444951 TEN1Q86WV5 123 aa9.82□□□□□ -0.84
LIME1-202ENST00000444951 LIMD2Q9BT23 127 aa9.82□□□□□ -0.84
LIME1-202ENST00000444951 OBSCN-AS1Q96MR7 158 aa9.81□□□□□ -0.84
LIME1-202ENST00000444951 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
LIME1-202ENST00000444951 A0A087WSZ3 146 aa9.78□□□□□ -0.84
LIME1-202ENST00000444951 LOC110117498A0A087WWA1 95 aa9.78□□□□□ -0.84
LIME1-202ENST00000444951 Q6Q795 121 aa9.78□□□□□ -0.84
LIME1-202ENST00000444951 Q6ZQT0 140 aa9.78□□□□□ -0.84
LIME1-202ENST00000444951 PRR4Q16378 134 aa9.76□□□□□ -0.85
LIME1-202ENST00000444951 PDE6GP18545 87 aa9.75□□□□□ -0.85
LIME1-202ENST00000444951 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
LIME1-202ENST00000444951 Q5XG85 94 aa9.71□□□□□ -0.86
LIME1-202ENST00000444951 SS18L2Q9UHA2 77 aa9.71□□□□□ -0.86
LIME1-202ENST00000444951 C1orf195Q5TG92 126 aa9.69□□□□□ -0.86
LIME1-202ENST00000444951 MUC17Q685J3 4493 aa9.67□□□□□ -0.86
LIME1-202ENST00000444951 FAT4Q6V0I7 4981 aa9.66□□□□□ -0.86
LIME1-202ENST00000444951 IGLV7-46A0A075B6I9 117 aa9.66□□□□□ -0.86
LIME1-202ENST00000444951 ASB16-AS1Q495Z4 193 aa9.65□□□□□ -0.86
LIME1-202ENST00000444951 C21orf62-AS1Q17RA5 79 aa9.64□□□□□ -0.87
LIME1-202ENST00000444951 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
LIME1-202ENST00000444951 DEFB116Q30KQ4 102 aa9.63□□□□□ -0.87
LIME1-202ENST00000444951 A0A1B0GW54 56 aa9.6□□□□□ -0.87
LIME1-202ENST00000444951 Q96NJ1 140 aa9.6□□□□□ -0.87
LIME1-202ENST00000444951 SIGMAR1Q99720 223 aa9.59□□□□□ -0.87
LIME1-202ENST00000444951 NREPQ16612 68 aa9.58□□□□□ -0.88
LIME1-202ENST00000444951 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
LIME1-202ENST00000444951 LINC00472Q9H8W2 130 aa9.57□□□□□ -0.88
LIME1-202ENST00000444951 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
LIME1-202ENST00000444951 LINC00846Q9NV44 126 aa9.53□□□□□ -0.88
LIME1-202ENST00000444951 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
LIME1-202ENST00000444951 Q6ZVQ6 151 aa9.51□□□□□ -0.89
LIME1-202ENST00000444951 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
LIME1-202ENST00000444951 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
LIME1-202ENST00000444951 CDIP1Q9H305 208 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms